ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78b04 |
|---|---|
| Clone Library Name | barley_pub |
>PUR8_HAEIN (P44797) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/48 (52%), Positives = 34/48 (70%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEV 494 + ALSPLDGRY + L FSEFGL+++RV VEV+WL KL+ ++ Sbjct: 6 LTALSPLDGRYQDKVTPLRAIFSEFGLMKFRVAVEVRWLQKLASTADI 53
>PUR8_BUCAP (Q8K9Q7) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 51.2 bits (121), Expect = 1e-06 Identities = 22/48 (45%), Positives = 33/48 (68%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEV 494 + A+SP+DGRY K L FSEFG ++YR+ VE++WL KL + ++ Sbjct: 6 LTAISPIDGRYSNSTKLLRNIFSEFGFLKYRLYVEIQWLKKLINMHQI 53
>PUR8_ECOLI (P0AB89) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 48.9 bits (115), Expect = 7e-06 Identities = 22/43 (51%), Positives = 32/43 (74%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLS 479 + A+SP+DGRY + L FSE+GL+++RV VEV+WL KL+ Sbjct: 6 LTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLA 48
>PUR8_ECOL6 (P0AB90) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 48.9 bits (115), Expect = 7e-06 Identities = 22/43 (51%), Positives = 32/43 (74%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLS 479 + A+SP+DGRY + L FSE+GL+++RV VEV+WL KL+ Sbjct: 6 LTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLA 48
>PUR8_BUCAI (P57351) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 456 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/48 (41%), Positives = 32/48 (66%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPEV 494 + A+SP+DGRY L FSEFG ++YR+ +EV+WL K+ + ++ Sbjct: 6 LTAISPVDGRYSNLTILLRNIFSEFGFLKYRLNIEVQWLKKIISMSQI 53
>PUR8_BUCBP (Q89AM3) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)| (ASL) Length = 460 Score = 45.8 bits (107), Expect = 6e-05 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +3 Query: 351 MMALSPLDGRYIRFIKDLMPFFSEFGLIRYRVLVEVKWLLKLSQIPE 491 + A+SP+DGRY + L FSE+ +++RV +E+ WL K+S + E Sbjct: 6 LFAISPIDGRYSSKVIKLRNIFSEYAFLKFRVTIELLWLKKISLLQE 52
>YQ56_CAEEL (Q09252) Hypothetical protein C16C10.6| Length = 392 Score = 32.0 bits (71), Expect = 0.92 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Frame = -1 Query: 379 RPSRGDSAIIQKLSRSVACSSSSTDLAAQP-----RGAL---ITPKSLAPATTAAEQRRR 224 +P + D +KL +S+ S + A +P G L + S ATT AE+ R+ Sbjct: 221 KPEKSDKKPAEKLKKSIYSDDSDEEKAPKPPQKNFEGDLKPGLNTVSKKKATTHAERIRQ 280 Query: 223 RGGCAVAPSTAALGAAVTRGEARKAAVAGDLRK 125 R PS+ GA R R ++ + RK Sbjct: 281 RNYTPTPPSSDDEGARAPRARRRTSSPSPTSRK 313
>PHYK1_ORYSA (Q7XR51) Probable phytol kinase 1, chloroplast precursor (EC| 2.7.-.-) Length = 314 Score = 31.6 bits (70), Expect = 1.2 Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = -1 Query: 337 RSVACSSSSTDLAAQPRGALITPKS--LAPATTAAEQRRRR----GGCAVAPSTAALGAA 176 R CSSS +AA L KS +PA AA RRR G A AP+ AAL A+ Sbjct: 12 RHFPCSSS---VAASSSLLLSRSKSRLASPAAAAASSMRRRLVLGVGAAAAPAVAALAAS 68 Query: 175 VTRGEARKAA 146 T R A Sbjct: 69 ATPAALRDCA 78 Score = 30.4 bits (67), Expect = 2.7 Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 13/117 (11%) Frame = +3 Query: 129 LKSPATAAFLASPR-------VTAAPRAAVLGATAQPPRRLRCSAAVVAGARDFGVMSAP 287 L SPA AA + R AAP A L A+A P C+A ++ A + ++ A Sbjct: 35 LASPAAAAASSMRRRLVLGVGAAAAPAVAALAASATPAALRDCAATLLITAGAYSLVRAF 94 Query: 288 LGWAARSVEELEQATD----LDSFCMMALSPL--DGRYIRFIKDLMPFFSEFGLIRY 440 G AR + E + L M+ PL + RF ++P + L+ Y Sbjct: 95 DGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFSNSTEARFFAAIVPLLNCIRLLTY 151
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 379 RPSRGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPK-SLAPATTAAEQRRRRGGC 212 R RG ++ + CSSSS A+P L+ + +LAP T RRR C Sbjct: 179 RKGRGCQESAFQMGKDQVCSSSSLSFRARPNLRLLEERGNLAPRGTLTSSLRRRESC 235
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 30.4 bits (67), Expect = 2.7 Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 5/89 (5%) Frame = +3 Query: 3 PIPFPSLPSPSQA----PHGPTSPPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFL-ASP 167 P P P+ P P +A P G P +P K P T L ASP Sbjct: 1274 PPPPPTAPKPVKAVAGLPSGSAGPSPAPSP--------ARQPPAALAKPPGTPPSLGASP 1325 Query: 168 RVTAAPRAAVLGATAQPPRRLRCSAAVVA 254 +P A L A+PPR +AA A Sbjct: 1326 AKPPSPGAPALHVPAKPPRAAAAAAAAAA 1354
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Frame = +3 Query: 3 PIPFPSLPSPSQ--APHGPTS---PPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASP 167 P PF ++P + AP P S P PRV PA AA A+P Sbjct: 444 PHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAATAATP 503 Query: 168 RVTAAPRAAVLGATAQPPRRLRCSAAV 248 V P+ P + L V Sbjct: 504 AVRTVPQYKYAAGVRNPQQHLNAQPQV 530
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Frame = +3 Query: 3 PIPFPSLPSPSQ--APHGPTS---PPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASP 167 P PF ++P + AP P S P PRV PA AA A+P Sbjct: 444 PHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATP 503 Query: 168 RVTAAPRAAVLGATAQPPRRLRCSAAV 248 V P+ P + L V Sbjct: 504 AVRTVPQYKYAAGVRNPQQHLNAQPQV 530
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Frame = +3 Query: 3 PIPFPSLPSPSQ--APHGPTS---PPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASP 167 P PF ++P + AP P S P PRV PA AA A+P Sbjct: 444 PHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATP 503 Query: 168 RVTAAPRAAVLGATAQPPRRLRCSAAV 248 V P+ P + L V Sbjct: 504 AVRTVPQYKYAAGVRNPQQHLNAQPQV 530
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Frame = +3 Query: 3 PIPFPSLPSPSQ--APHGPTS---PPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASP 167 P PF ++P + AP P S P PRV PA AA A+P Sbjct: 444 PHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATP 503 Query: 168 RVTAAPRAAVLGATAQPPRRLRCSAAV 248 V P+ P + L V Sbjct: 504 AVRTVPQYKYAAGVRNPQQHLNAQPQV 530
>HUT1_CRYNE (Q5K915) UDP-galactose transporter homolog 1| Length = 412 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +3 Query: 9 PFPSL-PSPSQAPHGPTSPP 65 PFPS+ P P Q PH P+ PP Sbjct: 30 PFPSVHPHPHQQPHSPSDPP 49
>MK07_HUMAN (Q13164) Mitogen-activated protein kinase 7 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 5) (ERK-5) (ERK4) (BMK1 kinase) Length = 815 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 Query: 3 PIPFPSLPSPSQAPHGPTSPP 65 P+P P+ P P APH PT PP Sbjct: 626 PVPQPACPPPGPAPH-PTGPP 645
>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 507 Score = 29.6 bits (65), Expect = 4.6 Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 2/95 (2%) Frame = +3 Query: 15 PSLPSPSQAPHGPTSPPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASPRVTAAPRA- 191 P P ++AP P SPP P TA +PR + P A Sbjct: 315 PPPPPVARAPASPPSPPSSLDPCAPAPAPSSALQKPKIWSLAETATSPDNPR-RSPPGAG 373 Query: 192 -AVLGATAQPPRRLRCSAAVVAGARDFGVMSAPLG 293 + GA PP AA A A ++SAPLG Sbjct: 374 GSPPGAAVAPPTLQLSPAAAAAAAAAHRLVSAPLG 408
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 4.6 Identities = 27/88 (30%), Positives = 31/88 (35%) Frame = +3 Query: 9 PFPSLPSPSQAPHGPTSPPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASPRVTAAPR 188 P P+PSQ P PT P+ APR +PA F A P AAP Sbjct: 114 PSAPAPAPSQGPR-PTPGPK-PAPR----------------PAPAAPEFTAPPAAPAAPS 155 Query: 189 AAVLGATAQPPRRLRCSAAVVAGARDFG 272 + P R A GAR G Sbjct: 156 TPAPAPSGPKPGGARPGAPKPGGARPSG 183
>PRAX_HUMAN (Q9BXM0) Periaxin| Length = 1461 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 Query: 171 VTAAPRAAVLGATAQPPRRLRCSAAVVAGAR 263 V +AA L A A PPR+ + A V AGAR Sbjct: 198 VAEEAQAARLAAAAPPPRKAKVEAEVAAGAR 228
>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific| (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) Length = 1739 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 Query: 3 PIPFPSLPSPSQAPHGPTSPPRFHAP 80 P P P LP P+ P PP HAP Sbjct: 1597 PPPPPPLPPPAHLGRSPAGPPVLHAP 1622
>SMYD4_PONPY (Q5R5X9) SET and MYND domain-containing protein 4| Length = 804 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 312 EELEQATDLDSFCMMALSPLDGRYIRFIKDLMP 410 EE EQ + S + + PL GRY+ KD++P Sbjct: 223 EENEQLSSASSSVGLCIDPLKGRYLVATKDILP 255
>MYOD_DICDI (P34109) Myosin ID heavy chain| Length = 1109 Score = 29.3 bits (64), Expect = 6.0 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -1 Query: 301 AAQPR--GALITPKSLAPATTAAEQRRRRGGCAVAPSTAALGAAVTRGEARKAAVAGDLR 128 AA PR G + + AP TT RGG PSTA G RG A ++ G Sbjct: 1018 AAPPRAGGPPVPTGNRAPTTTTTSGGSTRGGFNNGPSTAPSG----RGAAPPSSRGGMAP 1073 Query: 127 KGGA 116 +GG+ Sbjct: 1074 RGGS 1077
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (ZF87) (ZIF87) Length = 477 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/71 (25%), Positives = 24/71 (33%) Frame = +3 Query: 9 PFPSLPSPSQAPHGPTSPPRFHAPRVXXXXXXXXXXXXXFLKSPATAAFLASPRVTAAPR 188 PF + P+P P P + P + + A AA A+P AA Sbjct: 62 PFQAAPAPPPTPQAPAAEP-LQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120 Query: 189 AAVLGATAQPP 221 A QPP Sbjct: 121 TVDTAALKQPP 131
>AURB_CHLAU (P27197) Auracyanin B precursor (Ac-B) [Contains: Auracyanin B-1;| Auracyanin B-2] Length = 235 Score = 29.3 bits (64), Expect = 6.0 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%) Frame = +3 Query: 129 LKSPATAA--FLASPRVTAAPRAAVLGATAQPPRRLRCSAAVVAGARDFGVMSAPLGWAA 302 + S ATA A+PR TA PR A QPP +A A G + A Sbjct: 52 IASNATAGGFVAATPRPTATPRPTAAPAPTQPPAAQPTTAPATQAANAPGGSNVVNETPA 111 Query: 303 RSVEELEQATDLDSFCMMALS 365 ++V E+ A D +F +LS Sbjct: 112 QTV-EVRAAPDALAFAQTSLS 131
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 29.3 bits (64), Expect = 6.0 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = -1 Query: 376 PSRGDSAIIQKLSRSVACSSSSTDLAAQPRGALITPKSLAPATTAAEQRRRRGGCAVAPS 197 P+ +A + + + A +++ T AA T APATTAA + A AP+ Sbjct: 38 PTAAVAATGEDATTAAATAAAETTAAAGEAPTTTT----APATTAAGKAPTTAA-ATAPT 92 Query: 196 TAALGAAVT-RGEARKAAVA 140 TAA GA T G+A A A Sbjct: 93 TAAAGAPTTATGKAPATAAA 112
>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte| formin) (CLL-associated antigen KW-13) Length = 1100 Score = 29.3 bits (64), Expect = 6.0 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 3 PIPFPSLPSPSQAPHGPTSPPR 68 P P P LPSP +AP P++PP+ Sbjct: 545 PPPLPGLPSPQEAP--PSAPPQ 564
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 29.3 bits (64), Expect = 6.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 3 PIPFPSLPSPSQAPHGPTSPPRFHAPRV 86 P+P P PSPS P P+ PP P + Sbjct: 66 PLPSPPPPSPSPPPPSPSPPPPSTIPLI 93
>PLSB_MYCTU (O53207) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 789 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = -1 Query: 475 SFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQKLSRSVACSSSSTDLAA 296 S+S T ++T ++ P K G+ S + Y R D ++Q +S T+ AA Sbjct: 351 SWSIEGTRSRTGKMLPP---KLGLMSYVADAYLDGRSDDILLQGVSICFDQLHEITEYAA 407 Query: 295 QPRGALITPKSL 260 RGA TP+ L Sbjct: 408 YARGAEKTPEGL 419
>PLSB_MYCBO (Q7TYH5) Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) (GPAT)| Length = 789 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/72 (30%), Positives = 34/72 (47%) Frame = -1 Query: 475 SFSNHLTSTKTRYLMRPNSLKKGIKSLINLMYRPSRGDSAIIQKLSRSVACSSSSTDLAA 296 S+S T ++T ++ P K G+ S + Y R D ++Q +S T+ AA Sbjct: 351 SWSIEGTRSRTGKMLPP---KLGLMSYVADAYLDGRSDDILLQGVSICFDQLHEITEYAA 407 Query: 295 QPRGALITPKSL 260 RGA TP+ L Sbjct: 408 YARGAEKTPEGL 419
>SECD_MYCTU (Q50634) Protein-export membrane protein secD| Length = 573 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 3 PIPFPSLPSPSQAPHGPTSPP 65 P P+P P+PS P P SPP Sbjct: 168 PRPYPQDPAPSPNPTSPASPP 188
>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)| Length = 1157 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 Query: 9 PFPSLPSPSQAPHGPTSPPRFHAPRV 86 P PS PS AP P +PP AP V Sbjct: 702 PVPSAPSVPSAPPVPPAPPALSAPSV 727
>DGAT1_RAT (Q9ERM3) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -1 Query: 244 AAEQRRRRGGCAVAPSTAALGAAVTRGEARKAAVAGDLRKGG 119 A RRRR G V+ + G V E R+AAV+ DL GG Sbjct: 7 AGSSRRRRTGSRVSVQGGS-GPKVEEDEVREAAVSPDLGAGG 47
>ENGC_STRCO (Q9ZBT9) Probable GTPase engC (EC 3.6.1.-)| Length = 366 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +3 Query: 138 PATAAFLASPRVTAAPRAAVLGATAQPPRRLRCSAAVVAG 257 P T A+L TAAP VL +A+ L AAVV+G Sbjct: 162 PVTLAYLVQDVETAAPGVPVLPVSAEQGEGLDVLAAVVSG 201
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 448 KTRYLMRPNSLKKGIKSLINLMYRPSRGDSAII 350 KTR L+R +KG+ L L+Y GD II Sbjct: 11 KTRKLLRKKPREKGLSGLSRLLYEYKVGDKVII 43
>ANP4_PSEAM (P02734) Ice-structuring protein 4 precursor (ISP 4) (Antifreeze| peptide 4) Length = 85 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/54 (37%), Positives = 22/54 (40%) Frame = -1 Query: 307 DLAAQPRGALITPKSLAPATTAAEQRRRRGGCAVAPSTAALGAAVTRGEARKAA 146 D A P A + S A A AA A +TAA AA T A KAA Sbjct: 11 DAKAVPAAAAPSTASDAAAAAAATAATAAAAAAATAATAAAAAAATAATAAKAA 64
>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein| (Mitogen-activated protein kinase 1-interacting protein 1) Length = 263 Score = 28.9 bits (63), Expect = 7.8 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 6 IPFPSLPSPSQAPHGPTSP 62 +PFP LP P+ AP P P Sbjct: 51 VPFPELPRPNSAPTDPVGP 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,710,740 Number of Sequences: 219361 Number of extensions: 986989 Number of successful extensions: 5352 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 4452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5296 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
