ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13 47 2e-05
2REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Aller... 44 1e-04
3Y3550_ARATH (Q9MA63) Protein At3g05500 42 3e-04
4SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa... 40 0.001
5SRP_VITRI (Q9SW70) Stress-related protein 38 0.007
6Y2778_ARATH (O82246) Protein At2g47780 35 0.062
7SRP_PHAVU (Q41112) Stress-related protein (PvSRP) 34 0.081
8S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding prot... 28 4.5
9S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding prot... 28 4.5
10UL24_VZVD (P09288) Gene 35 protein 27 10.0

>Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13|
          Length = 253

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
 Frame = +3

Query: 72  APTSFQKPPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPL 251
           AP S  +P          +    AE  RLR L F               YA A+  +GPL
Sbjct: 8   APIS-NRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPL 66

Query: 252 RPGVDAVESAXRGVAG----RFHG 311
           RPGVD VE   + V G    RFHG
Sbjct: 67  RPGVDHVEGTVKAVVGPVYDRFHG 90



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>REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Allergen Hev b 1)|
          Length = 137

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +3

Query: 126 DSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVA 296
           + +QQ +   L+ LGF              +Y  A+D SGPL+PGVD +E   + VA
Sbjct: 4   EDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVA 60



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>Y3550_ARATH (Q9MA63) Protein At3g05500|
          Length = 246

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVAG 299
           E+ RL+ L F              +YA A+D SGPL+PGV++VE A + V G
Sbjct: 18  EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVG 69



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>SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa rubber|
           particle protein) (22 kDa RPP) (Latex allergen Hev b 3)
           (27 kDa natural rubber allergen)
          Length = 204

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 132 SQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGV 293
           +++ E  RL+ L F              LY  A+D SGPL+PGVD +E+  + V
Sbjct: 2   AEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTV 55



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>SRP_VITRI (Q9SW70) Stress-related protein|
          Length = 248

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVAG 299
           E  RL+ L F              LY  A+++SGPL+PGV  VE   + V G
Sbjct: 16  EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIG 67



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>Y2778_ARATH (O82246) Protein At2g47780|
          Length = 235

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 93  PPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAV 272
           PP S  S ++    +  +  +L+ L F              LY LA+D++GPL+ GV+ +
Sbjct: 22  PPSSSSSPSLV--VEDDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENI 79

Query: 273 ESAXRGV 293
           E   R V
Sbjct: 80  EDCVRTV 86



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>SRP_PHAVU (Q41112) Stress-related protein (PvSRP)|
          Length = 167

 Score = 34.3 bits (77), Expect = 0.081
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
 Frame = +3

Query: 216 LYALARDHSGPLRPGVDAVESAXRGVAG----RFH 308
           LY+ A++ +GPL+PGV+ VE A + V      RFH
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFH 40



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>S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding protein A14) (S114)|
          Length = 104

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = -3

Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53
           S C LE  IA   N      E G FW+L+G  AKS +
Sbjct: 60  SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96



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>S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding protein A14)|
          Length = 104

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = -3

Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53
           S C LE  IA   N      E G FW+L+G  AKS +
Sbjct: 60  SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96



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>UL24_VZVD (P09288) Gene 35 protein|
          Length = 258

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  SHLPPQASRNPPVRSIRERWR 126
           SHL   A   PP+RS+RER R
Sbjct: 177 SHLENVAEYTPPIRSVRERRR 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,670,877
Number of Sequences: 219361
Number of extensions: 503338
Number of successful extensions: 2073
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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