| Clone Name | bast78a09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13 | 47 | 2e-05 | 2 | REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Aller... | 44 | 1e-04 | 3 | Y3550_ARATH (Q9MA63) Protein At3g05500 | 42 | 3e-04 | 4 | SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa... | 40 | 0.001 | 5 | SRP_VITRI (Q9SW70) Stress-related protein | 38 | 0.007 | 6 | Y2778_ARATH (O82246) Protein At2g47780 | 35 | 0.062 | 7 | SRP_PHAVU (Q41112) Stress-related protein (PvSRP) | 34 | 0.081 | 8 | S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding prot... | 28 | 4.5 | 9 | S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding prot... | 28 | 4.5 | 10 | UL24_VZVD (P09288) Gene 35 protein | 27 | 10.0 |
|---|
>Y1A7_ORYSA (Q9FRA7) Hypothetical protein P0001A07.13| Length = 253 Score = 46.6 bits (109), Expect = 2e-05 Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Frame = +3 Query: 72 APTSFQKPPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPL 251 AP S +P + AE RLR L F YA A+ +GPL Sbjct: 8 APIS-NRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPL 66 Query: 252 RPGVDAVESAXRGVAG----RFHG 311 RPGVD VE + V G RFHG Sbjct: 67 RPGVDHVEGTVKAVVGPVYDRFHG 90
>REF_HEVBR (P15252) Rubber elongation factor protein (REF) (Allergen Hev b 1)| Length = 137 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +3 Query: 126 DSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVA 296 + +QQ + L+ LGF +Y A+D SGPL+PGVD +E + VA Sbjct: 4 EDNQQGQGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVA 60
>Y3550_ARATH (Q9MA63) Protein At3g05500| Length = 246 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = +3 Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVAG 299 E+ RL+ L F +YA A+D SGPL+PGV++VE A + V G Sbjct: 18 EKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVG 69
>SRPP_HEVBR (O82803) Small rubber particle protein (SRPP) (22 kDa rubber| particle protein) (22 kDa RPP) (Latex allergen Hev b 3) (27 kDa natural rubber allergen) Length = 204 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 132 SQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGV 293 +++ E RL+ L F LY A+D SGPL+PGVD +E+ + V Sbjct: 2 AEEVEEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTV 55
>SRP_VITRI (Q9SW70) Stress-related protein| Length = 248 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = +3 Query: 144 ERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAVESAXRGVAG 299 E RL+ L F LY A+++SGPL+PGV VE + V G Sbjct: 16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIG 67
>Y2778_ARATH (O82246) Protein At2g47780| Length = 235 Score = 34.7 bits (78), Expect = 0.062 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = +3 Query: 93 PPRSFDSRAMADSSQQAERPRLRRLGFXXXXXXXXXXXXXGLYALARDHSGPLRPGVDAV 272 PP S S ++ + + +L+ L F LY LA+D++GPL+ GV+ + Sbjct: 22 PPSSSSSPSLV--VEDDDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENI 79 Query: 273 ESAXRGV 293 E R V Sbjct: 80 EDCVRTV 86
>SRP_PHAVU (Q41112) Stress-related protein (PvSRP)| Length = 167 Score = 34.3 bits (77), Expect = 0.081 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 4/35 (11%) Frame = +3 Query: 216 LYALARDHSGPLRPGVDAVESAXRGVAG----RFH 308 LY+ A++ +GPL+PGV+ VE A + V RFH Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFH 40
>S10AE_MOUSE (Q9D2Q8) Protein S100-A14 (S100 calcium-binding protein A14) (S114)| Length = 104 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Frame = -3 Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53 S C LE IA N E G FW+L+G AKS + Sbjct: 60 SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96
>S10AE_BOVIN (Q3MHP3) Protein S100-A14 (S100 calcium-binding protein A14)| Length = 104 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 6/37 (16%) Frame = -3 Query: 145 SACWLESAIARESN------ERGGFWKLVGANAKSTR 53 S C LE IA N E G FW+L+G AKS + Sbjct: 60 SNCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVK 96
>UL24_VZVD (P09288) Gene 35 protein| Length = 258 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +1 Query: 64 SHLPPQASRNPPVRSIRERWR 126 SHL A PP+RS+RER R Sbjct: 177 SHLENVAEYTPPIRSVRERRR 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,670,877 Number of Sequences: 219361 Number of extensions: 503338 Number of successful extensions: 2073 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2071 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)