ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78a05 |
|---|---|
| Clone Library Name | barley_pub |
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 92.4 bits (228), Expect = 6e-19 Identities = 42/63 (66%), Positives = 48/63 (76%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M+IQCD CE A ATV+CCADEAALC +CD++IHAANKLASKHQRL L RCD Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLN--SLSTKFPRCD 58 Query: 490 VCQ 498 +CQ Sbjct: 59 ICQ 61 Score = 47.0 bits (110), Expect = 3e-05 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +1 Query: 319 QCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQR 441 +CD C+ AA + C D A LC CD IH AN ++ HQR Sbjct: 56 RCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 89.0 bits (219), Expect = 7e-18 Identities = 40/62 (64%), Positives = 48/62 (77%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M+IQCD CE A AT++CCADEAALCA+CDV++HAANKLASKHQRL L+ CD Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLD--SLSTKFPPCD 58 Query: 490 VC 495 +C Sbjct: 59 IC 60 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/40 (45%), Positives = 21/40 (52%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQR 441 CD C AA + C D A LC CD HA N ++ HQR Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQR 96
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 87.8 bits (216), Expect = 2e-17 Identities = 39/63 (61%), Positives = 47/63 (74%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M+IQC+ CE A ATV+CCADEAALC CD +IHAANKLA KHQR+PL + +CD Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL--SASASSIPKCD 58 Query: 490 VCQ 498 +CQ Sbjct: 59 ICQ 61 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = +1 Query: 319 QCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 +CD C+ A+ C D A LC +CDV IH N S HQR L Sbjct: 56 KCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLL 99
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 67.0 bits (162), Expect = 3e-11 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLP-LEXXXXXXXLXRC 486 M+I+CD C+ A+V C ADEA+LC CD Q+H ANKLASKH R L C Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60 Query: 487 DVCQ 498 D+CQ Sbjct: 61 DICQ 64 Score = 45.1 bits (105), Expect = 1e-04 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 CD C+ A + C D A LC CD IHAAN+ KH R L Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 62.0 bits (149), Expect = 9e-10 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 C+ CE A A V C AD AALC CD IH+AN LAS+H+R+P+E Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVE 104 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = +1 Query: 295 GKAAAMRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXX 474 G AA R CDAC+ A V C D A LC CD +IH+ ++H+R+ + Sbjct: 14 GWGAAAR-SCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWV-------- 60 Query: 475 LXRCDVCQGQP 507 C+VC+ P Sbjct: 61 ---CEVCEQAP 68
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 61.6 bits (148), Expect = 1e-09 Identities = 25/41 (60%), Positives = 31/41 (75%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRL 444 CD C AA TV C AD A LC+ CD Q+HAAN+LAS+H+R+ Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERV 52 Score = 55.8 bits (133), Expect = 7e-08 Identities = 23/43 (53%), Positives = 30/43 (69%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C +CE A A C AD A+LC CD +IH+AN LA +HQR+P+ Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 60.5 bits (145), Expect = 3e-09 Identities = 29/62 (46%), Positives = 38/62 (61%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 CD+C+ AAT+ C AD A LC CD +IH ANKLAS+H+R+ L C+VC+ Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL-----------CEVCEQ 56 Query: 502 QP 507 P Sbjct: 57 AP 58 Score = 55.5 bits (132), Expect = 9e-08 Identities = 23/43 (53%), Positives = 30/43 (69%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C+ CE A A V C AD AALC CD IH+AN L+ +H+R+P+ Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 58.5 bits (140), Expect = 1e-08 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 CD C AA TV C AD A LC CD ++HAAN++AS+H+R+ + C C+ Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV-----------CQSCES 64 Query: 502 QP 507 P Sbjct: 65 AP 66 Score = 58.2 bits (139), Expect = 1e-08 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C +CE A A +C AD A+LC CD +IH+AN LA +HQR+P+ Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 57.8 bits (138), Expect = 2e-08 Identities = 22/43 (51%), Positives = 33/43 (76%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C++CE A A +C AD+A+LC CD ++H+AN LA +HQR+P+ Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105 Score = 56.2 bits (134), Expect = 5e-08 Identities = 25/62 (40%), Positives = 35/62 (56%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 CD C A TV C AD A LC CD Q+H+AN++AS+H+R+ + C+ C+ Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV-----------CESCER 68 Query: 502 QP 507 P Sbjct: 69 AP 70
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 56.2 bits (134), Expect = 5e-08 Identities = 24/43 (55%), Positives = 30/43 (69%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C+ CE A A V C AD AALC CD IH+AN LA +H+R+P+ Sbjct: 49 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPV 91 Score = 56.2 bits (134), Expect = 5e-08 Identities = 26/62 (41%), Positives = 36/62 (58%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 CD+C+ A A + C D A LC CD ++HAANKLAS+H R+ + C+VC+ Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM-----------CEVCEQ 54 Query: 502 QP 507 P Sbjct: 55 AP 56
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 53.1 bits (126), Expect = 4e-07 Identities = 27/64 (42%), Positives = 32/64 (50%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 CD C+ + A V C AD A LC CD Q+H AN+L +KH R L CD C Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL-----------CDSCNE 61 Query: 502 QPPS 513 P S Sbjct: 62 SPSS 65 Score = 37.4 bits (85), Expect = 0.025 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CD+C + +++ C + + LC CD Q H A+ +S H R P E Sbjct: 56 CDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFE 97
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 52.0 bits (123), Expect = 1e-06 Identities = 24/62 (38%), Positives = 32/62 (51%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 C+ C+ A V C AD A LC CD ++H+AN L+ +H R L CD C+ Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL-----------CDSCKN 62 Query: 502 QP 507 QP Sbjct: 63 QP 64
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/71 (36%), Positives = 35/71 (49%) Frame = +1 Query: 301 AAAMRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLX 480 +++ R+ CD C A + C AD A LC CD Q+H AN L+ KH R + Sbjct: 2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------- 51 Query: 481 RCDVCQGQPPS 513 CD C +P S Sbjct: 52 -CDNCGNEPVS 61 Score = 35.0 bits (79), Expect = 0.12 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CD C +V C D LC CD +H + ++ H R +E Sbjct: 52 CDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVE 95
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M +CD C A + C +D A LC CDV +H+AN L+ +H R L C+ Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL-----------CE 49 Query: 490 VCQGQP 507 C QP Sbjct: 50 KCSLQP 55
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 48.5 bits (114), Expect = 1e-05 Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%) Frame = +1 Query: 322 CDAC-EGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CDAC + + A+ C AD+A LC CD IH+AN LA +H+R+ L+ Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQ 66
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CD+C A C AD+A LC CD +H+AN LA +H+R+ L+ Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLK 60
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CD+C A C AD+A LC CD +H+AN LA +H+R+ L+ Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLK 60
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 47.0 bits (110), Expect = 3e-05 Identities = 23/66 (34%), Positives = 33/66 (50%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M +CD C + A + C +D A LC CDV +H+AN L+ +H R + C+ Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI-----------CE 49 Query: 490 VCQGQP 507 C QP Sbjct: 50 KCFSQP 55
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/68 (33%), Positives = 31/68 (45%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M CD C + V C +D A LC CD +H+AN L+ +H R + C+ Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV-----------CE 49 Query: 490 VCQGQPPS 513 C QP S Sbjct: 50 RCNAQPAS 57 Score = 29.3 bits (64), Expect = 6.7 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = +1 Query: 298 KAAAMRIQCDACEGAAATVVCCADEAALCARCDVQIH-AANKLASKHQR 441 K + + C+ C A+V C + +LC CD H N + H + Sbjct: 40 KRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = +1 Query: 316 IQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVC 495 + C+ C A + C AD A LC CD +H+AN L+ KH R + CD C Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI-----------CDNC 58 Query: 496 QGQPPS 513 +P S Sbjct: 59 SKEPVS 64 Score = 36.2 bits (82), Expect = 0.055 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLE 453 CD C +V C D LC CD +H + ++ H+R +E Sbjct: 55 CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVE 98
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 45.1 bits (105), Expect = 1e-04 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +1 Query: 310 MRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCD 489 M CD C + V C +D A LC CD +H+AN L+ +H R + C+ Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV-----------CE 49 Query: 490 VCQGQP 507 C QP Sbjct: 50 RCNAQP 55 Score = 30.0 bits (66), Expect = 3.9 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +1 Query: 298 KAAAMRIQCDACEGAAATVVCCADEAALCARCDVQIH 408 K + + C+ C ATV C + +LC CD H Sbjct: 40 KRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGH 76
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 44.3 bits (103), Expect = 2e-04 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = +1 Query: 322 CDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 C+ C A C +D+A LC CD +H+AN +A+KH+R+ L Sbjct: 15 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 57
>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog| Length = 539 Score = 39.7 bits (91), Expect = 0.005 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +1 Query: 298 KAAAMRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 K + ++CD A + C ++ LC RC H+ N L SKH+R+PL Sbjct: 100 KERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPL 149
>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (Fragment) Length = 554 Score = 36.2 bits (82), Expect = 0.055 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +1 Query: 316 IQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 I+CD E A+V C LC+ C H+ LA KH+R+PL Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 148
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 35.8 bits (81), Expect = 0.071 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = +1 Query: 295 GKAAAMRIQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 G + I+CD E A+V C LC+ C H+ LA KH+R+PL Sbjct: 118 GTSGESIIRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPL 168
>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (RING finger protein 46) Length = 574 Score = 35.8 bits (81), Expect = 0.071 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +1 Query: 316 IQCDACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPL 450 I+CD E A+V C LC+ C H+ LA KH+R+PL Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 168
>AGRN_CHICK (P31696) Agrin (Fragment)| Length = 1955 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/58 (25%), Positives = 26/58 (44%) Frame = +1 Query: 328 ACEGAAATVVCCADEAALCARCDVQIHAANKLASKHQRLPLEXXXXXXXLXRCDVCQG 501 +C G A ++VC +D + CD+ HA +K + ++ CD C+G Sbjct: 159 SCSGVAESIVCGSDGKDYRSECDLNKHACDKQENVFKKFD----------GACDPCKG 206
>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING| finger protein) Length = 710 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 298 KAAAMRIQCDACEGA--AATVVCCADEAALCARCDVQIHAANKLASKHQRLP 447 KAAA++ C CE A ATV+C + C C ++ H +KH+ +P Sbjct: 162 KAAALK--CQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 211
>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)| Length = 710 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 298 KAAAMRIQCDACEGA--AATVVCCADEAALCARCDVQIHAANKLASKHQRLP 447 KAAA++ C CE A ATV+C + C C ++ H +KH+ +P Sbjct: 162 KAAALK--CQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 211
>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9| Length = 817 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +1 Query: 298 KAAAMRIQCDACEGA--AATVVCCADEAALCARCDVQIHAANKLASKHQRLP 447 KAAA++ C CE A ATV+C + C C ++ H +KH+ +P Sbjct: 162 KAAALK--CQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 211
>GLUQ_BIFLO (Q8G4X3) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 379 Score = 28.9 bits (63), Expect = 8.7 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 159 RINRGDVHTRELPVDERASAVRRRLVPDD 73 R+ RGD H+ + + E A+ ++R VPDD Sbjct: 146 RLVRGDQHSIRIAMPESAAGEKQRTVPDD 174
>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4| precursor (LTBP-4) Length = 1666 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +3 Query: 9 PNQIPGRGERSLPERERARDTSHQGPAVA*PQRPSRPQEAPACARRRDLYAARFSP 176 P G S P+ + + PA P+RPS P++ P + RR+ Y +P Sbjct: 1177 PRAPAGTFPGSQPQAPASPSLPARPPAPPPPRRPSPPRQGPVSSGRRECYFDTAAP 1232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,496,472 Number of Sequences: 219361 Number of extensions: 845033 Number of successful extensions: 2455 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2455 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
