ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78a05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 246 bits (124), Expect = 6e-62 Identities = 139/144 (96%) Strand = Plus / Minus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 79595 catgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcgga 79536 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 79535 cgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 79476 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||||||||||||||||| Sbjct: 79475 caagcaccagcgcctcccgctcga 79452
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 246 bits (124), Expect = 6e-62 Identities = 139/144 (96%) Strand = Plus / Minus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 24624450 catgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcgga 24624391 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 24624390 cgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 24624331 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||||||||||||||||| Sbjct: 24624330 caagcaccagcgcctcccgctcga 24624307 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 6871448 gagggcgccgcggcggcggc 6871429
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 246 bits (124), Expect = 6e-62 Identities = 139/144 (96%) Strand = Plus / Minus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 63244 catgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcgga 63185 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 63184 cgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 63125 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||||||||||||||||| Sbjct: 63124 caagcaccagcgcctcccgctcga 63101
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 246 bits (124), Expect = 6e-62 Identities = 139/144 (96%) Strand = Plus / Minus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 13973 catgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcgga 13914 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 13913 cgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 13854 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||||||||||||||||| Sbjct: 13853 caagcaccagcgcctcccgctcga 13830
>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:E10707 Length = 987 Score = 246 bits (124), Expect = 6e-62 Identities = 139/144 (96%) Strand = Plus / Plus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 22 catgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcgga 81 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 82 cgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 141 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||||||||||||||||| Sbjct: 142 caagcaccagcgcctcccgctcga 165
>ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 244 bits (123), Expect = 2e-61 Identities = 138/143 (96%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 1 atgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggac 60 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 61 gaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccagc 120 Query: 430 aagcaccagcgcctcccgctcga 452 ||||||||||||||||||||||| Sbjct: 121 aagcaccagcgcctcccgctcga 143
>gb|AY109441.1| Zea mays CL359_1 mRNA sequence Length = 1551 Score = 222 bits (112), Expect = 9e-55 Identities = 139/148 (93%) Strand = Plus / Plus Query: 307 gccatgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcg 366 ||||||| |||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct: 91 gccatgaagatccagtgcgacgcgtgcgagggcgcggctgccaccgtggtgtgctgcgcc 150 Query: 367 gacgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggcc 426 |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 151 gacgaggccgcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 210 Query: 427 agcaagcaccagcgcctcccgctcgagg 454 |||||||||||||||||||||||||||| Sbjct: 211 agcaagcaccagcgcctcccgctcgagg 238
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA sequence Length = 1225 Score = 198 bits (100), Expect = 1e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 309 catgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcgga 368 ||||| ||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 76 catgaagatccagtgcgactcgtgcggcgtcgcggcggccacggtggtgtgctgcgcgga 135 Query: 369 cgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccag 428 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct: 136 cgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgctaacaagctcgccag 195 Query: 429 caagcaccagcgcctcccgctcga 452 |||||||||| | ||||||||||| Sbjct: 196 caagcaccagaggctcccgctcga 219
>ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 245 aagcaccagcggctgccgctggagg 269 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 282 ggctcccgcgctgcgacgtgtgccagg 308
>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25 mRNA Length = 1078 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 245 aagcaccagcggctgccgctggagg 269 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 282 ggctcccgcgctgcgacgtgtgccagg 308
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 23778769 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 23778828 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 23778829 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 23778888 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 23778889 aagcaccagcggctgccgctggagg 23778913 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 23778926 ggctcccgcgctgcgacgtgtgccagg 23778952
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 435 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 494 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 495 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 554 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 555 aagcaccagcggctgccgctggagg 579 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 592 ggctcccgcgctgcgacgtgtgccagg 618
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 89353 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 89412 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 89413 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 89472 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 89473 aagcaccagcggctgccgctggagg 89497 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 89510 ggctcccgcgctgcgacgtgtgccagg 89536
>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full insert sequence Length = 1065 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 245 aagcaccagcggctgccgctggagg 269 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 282 ggctcccgcgctgcgacgtgtgccagg 308
>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full insert sequence Length = 1078 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 245 aagcaccagcggctgccgctggagg 269 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 282 ggctcccgcgctgcgacgtgtgccagg 308
>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1577 Length = 1197 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 120 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 179 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 |||||||||||||||||| ||||||||| || | ||||| || |||||||||||| | Sbjct: 180 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 239 Query: 430 aagcaccagcgcctcccgctcgagg 454 ||||||||||| || ||||| |||| Sbjct: 240 aagcaccagcggctgccgctggagg 264 Score = 48.1 bits (24), Expect = 0.029 Identities = 26/27 (96%) Strand = Plus / Plus Query: 473 ggctccngcgctgcgacgtgtgccagg 499 |||||| |||||||||||||||||||| Sbjct: 277 ggctcccgcgctgcgacgtgtgccagg 303
>ref|XM_550653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 63 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 183 aagcaccagcg 193
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 2694546 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 2694605 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 2694606 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 2694665 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 2694666 aagcaccagcg 2694676 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gccagcaagcaccagcgcctcccgctcg 451 ||||||||||||| ||||||||||||| Sbjct: 29680496 gccagcaagcaccgccgcctcccgctcg 29680523
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 149887 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 149946 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 149947 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 150006 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 150007 aagcaccagcg 150017
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 106293 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 106352 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 106353 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 106412 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 106413 aagcaccagcg 106423
>dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D01, full insert sequence Length = 1339 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 63 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 183 aagcaccagcg 193
>dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E21, full insert sequence Length = 1450 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 96 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 155 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 156 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 215 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 216 aagcaccagcg 226
>dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R2931 Length = 1418 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 310 atgaggatccagtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggac 369 |||| |||||||||| ||||||||| | |||| |||| |||| |||||||||| ||| Sbjct: 71 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 130 Query: 370 gaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaacaagctggccagc 429 ||||| ||||| ||| || ||||||| | || | ||||||||||||||||| ||| | Sbjct: 131 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 190 Query: 430 aagcaccagcg 440 ||||||||||| Sbjct: 191 aagcaccagcg 201
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 63.9 bits (32), Expect = 5e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 327 cgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgctgtgcgc 386 ||||||||||| |||| |||| |||| | |||||||| ||||| || || || ||||| Sbjct: 18 cgcgtgcgaggcggcggaggcgcgggtgctctgctgcgccgacgacgccgccctctgcgc 77 Query: 387 gcgctgcgacgtgcagatccacgccgccaacaagctggccagcaagcaccagcgcctccc 446 |||||||||| | || |||||||||||||| || ||| |||||||||| |||||||| Sbjct: 78 gcgctgcgacctccacgtccacgccgccaaccgcctcgccggcaagcaccaccgcctccc 137
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 327 cgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgctgtgcgc 386 ||||||||||| |||| |||| |||| | |||||||| ||||| || || || ||||| Sbjct: 5638844 cgcgtgcgaggcggcggaggcgcgggtgctctgctgcgccgacgacgccgccctctgcgc 5638903 Query: 387 gcgctgcgacgtgcagatccacgccgccaacaagctggccagcaagcaccagcgcctccc 446 |||||||||| | || |||||||||||||| || ||| |||||||||| |||||||| Sbjct: 5638904 gcgctgcgacctccacgtccacgccgccaaccgcctcgccggcaagcaccaccgcctccc 5638963 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ggcgcggcggcgacggtggtg 357 ||||||||||||||||||||| Sbjct: 37654218 ggcgcggcggcgacggtggtg 37654238 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 36254809 cgagggcgccgcggcggcggc 36254789 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 7884906 cgagggcgccgcggcggcggc 7884926
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 63.9 bits (32), Expect = 5e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 327 cgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgctgtgcgc 386 ||||||||||| |||| |||| |||| | |||||||| ||||| || || || ||||| Sbjct: 104317 cgcgtgcgaggcggcggaggcgcgggtgctctgctgcgccgacgacgccgccctctgcgc 104376 Query: 387 gcgctgcgacgtgcagatccacgccgccaacaagctggccagcaagcaccagcgcctccc 446 |||||||||| | || |||||||||||||| || ||| |||||||||| |||||||| Sbjct: 104377 gcgctgcgacctccacgtccacgccgccaaccgcctcgccggcaagcaccaccgcctccc 104436
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 321 gtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgct 380 |||||||||||||||| |||| |||| ||||| |||||||||| |||||||| ||||| Sbjct: 5698863 gtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgct 5698922 Query: 381 gtgcgcgcgctgcgacg 397 ||| |||||||||| Sbjct: 5698923 ctgccgccgctgcgacg 5698939
>dbj|AK067820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117D12, full insert sequence Length = 793 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 321 gtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgct 380 |||||||||||||||| |||| |||| ||||| |||||||||| |||||||| ||||| Sbjct: 76 gtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgct 135 Query: 381 gtgcgcgcgctgcgacg 397 ||| |||||||||| Sbjct: 136 ctgccgccgctgcgacg 152
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 321 gtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgct 380 |||||||||||||||| |||| |||| ||||| |||||||||| |||||||| ||||| Sbjct: 5698856 gtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgct 5698915 Query: 381 gtgcgcgcgctgcgacg 397 ||| |||||||||| Sbjct: 5698916 ctgccgccgctgcgacg 5698932
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 321 gtgcgacgcgtgcgagggcgcggcggcgacggtggtgtgctgcgcggacgaggcggcgct 380 |||||||||||||||| |||| |||| ||||| |||||||||| |||||||| ||||| Sbjct: 53386 gtgcgacgcgtgcgagcaggcggaggcggcggtgctgtgctgcgccgacgaggccgcgct 53445 Query: 381 gtgcgcgcgctgcgacg 397 ||| |||||||||| Sbjct: 53446 ctgccgccgctgcgacg 53462
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 358 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaac 417 |||||||| |||||||| || |||||||||||||||||| | ||||||||||||||| Sbjct: 134852 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 134911
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 358 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaac 417 |||||||| |||||||| || |||||||||||||||||| | ||||||||||||||| Sbjct: 6433113 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 6433172 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 371 aggcggcgctgtgcgcgcgctgcgacgtg 399 ||||||||||| |||||||| |||||||| Sbjct: 28784766 aggcggcgctgggcgcgcgcggcgacgtg 28784794 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gcgagggcgcggcggcgacgg 352 ||||||||||||||||||||| Sbjct: 1381270 gcgagggcgcggcggcgacgg 1381290
>dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C11, full insert sequence Length = 2055 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 358 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtgcagatccacgccgccaac 417 |||||||| |||||||| || |||||||||||||||||| | ||||||||||||||| Sbjct: 281 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 340
>gb|M91814.1|BLYGLU2X Barley beta-1,3-glucanase (GLU2) gene, exons 1-2 Length = 2301 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 22 ccggccgcggcgagcgctccctgc 45 |||||||||||||||||||||||| Sbjct: 1326 ccggccgcggcgagcgctccctgc 1303
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 340 gcggcggcgacggtggtgtgctgcgcg 366 ||||||||||||| ||||||||||||| Sbjct: 110034 gcggcggcgacggcggtgtgctgcgcg 110060
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 324 cgacgcgtgcgagggcgcggcggcgac 350 ||||||| ||||||||||||||||||| Sbjct: 2530191 cgacgcgggcgagggcgcggcggcgac 2530165 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttcccggccgcggcgagcgc 38 |||||||||||||||||||| Sbjct: 4397487 ttcccggccgcggcgagcgc 4397506 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 3229932 gagggcgccgcggcggcggc 3229913
>ref|NM_209108.1| Eremothecium gossypii ADL340Wp (ADL340W), mRNA Length = 882 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 340 gcggcggcgacggtggtgtgctgcgcg 366 ||||||||||||| ||||||||||||| Sbjct: 287 gcggcggcgacggcggtgtgctgcgcg 313
>emb|AJ243504.1|LPE243504 Lolium perenne mRNA for pollen allergen (5C gene) Length = 1215 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtggtg 357 |||||||||||||||||||||| Sbjct: 726 gggcgcggcggcgacggtggtg 705
>ref|NM_170524.1| Drosophila melanogaster warts CG12072-RA (wts), mRNA Length = 5771 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 992 gccaaatcaaattcccggccgc 1013
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 113010 gccaaatcaaattcccggccgc 112989
>gb|BT004830.1| Drosophila melanogaster SD19495 full insert cDNA Length = 4874 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 5 gccaaatcaaattcccggccgc 26
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 129665 gccaaatcaaattcccggccgc 129644
>gb|L39837.1|DROWARTS Drosophila melanogaster tumor supressor (warts) mRNA exons 1-8, complete cds Length = 5360 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 995 gccaaatcaaattcccggccgc 1016
>gb|U29608.1|DMU29608 Drosophila melanogaster large tumor suppressor (lats) mRNA, long transcript, complete cds Length = 5720 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 gccaaatcaaattcccggccgc 29 |||||||||||||||||||||| Sbjct: 959 gccaaatcaaattcccggccgc 980
>ref|XM_475549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gcgagggcgcggcggcgacgg 352 ||||||||||||||||||||| Sbjct: 760 gcgagggcgcggcggcgacgg 740
>ref|XM_475953.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 371 aggcggcgctgtgcgcgcgctgcgacgtg 399 ||||||||||| |||||||| |||||||| Sbjct: 899 aggcggcgctgggcgcgcgcggcgacgtg 927
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 371 aggcggcgctgtgcgcgcgctgcgacgtg 399 ||||||||||| |||||||| |||||||| Sbjct: 103479 aggcggcgctgggcgcgcgcggcgacgtg 103507
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gcgagggcgcggcggcgacgg 352 ||||||||||||||||||||| Sbjct: 42932 gcgagggcgcggcggcgacgg 42952
>emb|AJ720554.1| Gallus gallus mRNA for hypothetical protein, clone 20c20 Length = 3269 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 agcaccagcgcctcccgctcg 451 ||||||||||||||||||||| Sbjct: 238 agcaccagcgcctcccgctcg 218
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 ggcgcggcggcgacggtggtg 357 ||||||||||||||||||||| Sbjct: 114692 ggcgcggcggcgacggtggtg 114712
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 4686 cgagggcgccgcggcggcggc 4666
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 79852 cgagggcgccgcggcggcggc 79872
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 131822 cgagggcgccgcggcggcggc 131802
>dbj|AK121602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041A14, full insert sequence Length = 2731 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ggcgcggcggcgacggtggtg 357 ||||||||||||||||||||| Sbjct: 277 ggcgcggcggcgacggtggtg 257
>dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G02, full insert sequence Length = 1482 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 371 aggcggcgctgtgcgcgcgctgcgacgtg 399 ||||||||||| |||||||| |||||||| Sbjct: 933 aggcggcgctgggcgcgcgcggcgacgtg 961
>dbj|AK071686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109M13, full insert sequence Length = 1466 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 182 cgagggcgccgcggcggcggc 202
>dbj|AK070434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051F22, full insert sequence Length = 1465 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcggc 470 ||||||||||||||||||||| Sbjct: 196 cgagggcgccgcggcggcggc 216
>dbj|AK067351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101G04, full insert sequence Length = 1379 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ggcgcggcggcgacggtggtg 357 ||||||||||||||||||||| Sbjct: 271 ggcgcggcggcgacggtggtg 251
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 371 aggcggcgctgtgcgcgcgctgcgacgtg 399 ||||||||||| |||||||| |||||||| Sbjct: 88701 aggcggcgctgggcgcgcgcggcgacgtg 88673
>ref|XM_483014.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 1046 gagggcgccgcggcggcggc 1027
>ref|XM_474813.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2388 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 112 gagggcgccgcggcggcggc 131
>ref|XM_478592.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2109 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 483 gggcgccgcggcggcggcag 502
>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence Length = 257924 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 aagctggccagcaagcacca 437 |||||||||||||||||||| Sbjct: 192115 aagctggccagcaagcacca 192134
>gb|AY022830.1| Oryza sativa microsatellite MRG5155 containing (CGC)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 136 gagggcgccgcggcggcggc 117
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tcccgctcgagggcgccgcg 462 |||||||||||||||||||| Sbjct: 651120 tcccgctcgagggcgccgcg 651101
>gb|AF067947.2| Caenorhabditis elegans cosmid T10B5, complete sequence Length = 40837 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 gcctgagcttagcttgagcc 256 |||||||||||||||||||| Sbjct: 14216 gcctgagcttagcttgagcc 14235
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcgg 469 |||||||||||||||||||| Sbjct: 3846145 cgagggcgccgcggcggcgg 3846164
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccctgccagagcgcgagcga 59 |||||||||||||||||||| Sbjct: 1066922 ccctgccagagcgcgagcga 1066941
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 1190767 gggcgcggcggcgacggtgg 1190748
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggaaggcagctgccatgagg 315 |||||||||||||||||||| Sbjct: 5671 ggaaggcagctgccatgagg 5690
>gb|AC006396.1| Homo sapiens PAC clone RP4-733H1 from 7, complete sequence Length = 81854 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agagacactagtcatcaggg 82 |||||||||||||||||||| Sbjct: 38902 agagacactagtcatcaggg 38921
>gb|AY258323.1| Rubella virus strain BRD-II, complete genome Length = 9778 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 8203 ggcgccgcggcggcggcagg 8184
>gb|AY258322.1| Rubella virus strain BR1, complete genome Length = 9778 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 8203 ggcgccgcggcggcggcagg 8184
>gb|AC105304.24| Mus musculus strain C57BL/6J clone rp23-71k5 map 17, complete sequence Length = 229816 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ggaaggcagctgccatgagg 315 |||||||||||||||||||| Sbjct: 120307 ggaaggcagctgccatgagg 120288
>emb|BX119904.4| Human DNA sequence from clone RP11-232D9 on chromosome X Contains two pseudogenes similar to part of solute carrier family 6 (neurotransmitter transporter) member 14 (SLC6A14) and a novel gene, complete sequence Length = 178704 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gaagcctgagcttagcttga 253 |||||||||||||||||||| Sbjct: 58386 gaagcctgagcttagcttga 58405
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cgctcgagggcgccgcggcg 465 |||||||||||||||||||| Sbjct: 3974134 cgctcgagggcgccgcggcg 3974115
>emb|Z97875.1|HL52ALLER Holcus lanatus mRNA for group V grass pollen allergen Length = 977 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 567 gggcgcggcggcgacggtgg 548
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcgg 469 |||||||||||||||||||| Sbjct: 43019 cgagggcgccgcggcggcgg 43038
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 2506704 gggcgcggcggcgacggtgg 2506685
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 cgagggcgccgcggcggcgg 469 |||||||||||||||||||| Sbjct: 56897 cgagggcgccgcggcggcgg 56916
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 149776 gagggcgccgcggcggcggc 149757
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 34319 gagggcgccgcggcggcggc 34300
>dbj|AK124765.1| Homo sapiens cDNA FLJ42775 fis, clone BRAWH3004530 Length = 5353 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gggaaggcagctgccatgag 314 |||||||||||||||||||| Sbjct: 4774 gggaaggcagctgccatgag 4793
>ref|NM_003403.3| Homo sapiens YY1 transcription factor (YY1), mRNA Length = 2592 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gggcgccgcggcggcggcagggct 476 |||||||||||||||||| ||||| Sbjct: 328 gggcgccgcggcggcggcggggct 305
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 acgccgccaacaagctggcc 426 |||||||||||||||||||| Sbjct: 2775543 acgccgccaacaagctggcc 2775524
>gb|AC152070.4| Pan troglodytes BAC clone RP43-135N21 from chromosome 7, complete sequence Length = 162075 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agagacactagtcatcaggg 82 |||||||||||||||||||| Sbjct: 11488 agagacactagtcatcaggg 11469
>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence Length = 145242 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 40565 gggcgccgcggcggcggcag 40546
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 256217 gggcgcggcggcgacggtgg 256236
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 23873616 gagggcgccgcggcggcggc 23873635
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 21325032 gggcgccgcggcggcggcag 21325051
>gb|AY968221.1| Rubella virus strain RVI/MYS/01 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 1692 ggcgccgcggcggcggcagg 1673
>gb|AY968217.1| Rubella virus strain RVI/PAN/99 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 1692 ggcgccgcggcggcggcagg 1673
>gb|AY968214.1| Rubella virus strain RVI/TOKOYO.JPN/90 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 1692 ggcgccgcggcggcggcagg 1673
>gb|AY968210.1| Rubella virus strain RVI/SHANDONG.CHN/02 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 1692 ggcgccgcggcggcggcagg 1673
>gb|AY968206.1| Rubella virus strain RVI/CAL.USA/97 structural protein gene, complete cds Length = 3192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggcgccgcggcggcggcagg 473 |||||||||||||||||||| Sbjct: 1692 ggcgccgcggcggcggcagg 1673
>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence Length = 162931 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gggaaggcagctgccatgag 314 |||||||||||||||||||| Sbjct: 159090 gggaaggcagctgccatgag 159071
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 65320 gagggcgccgcggcggcggc 65339
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gccagcaagcaccagcgcctcccgctcg 451 ||||||||||||| ||||||||||||| Sbjct: 53610 gccagcaagcaccgccgcctcccgctcg 53637
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gccagcaagcaccagcgcctcccgctcg 451 ||||||||||||| ||||||||||||| Sbjct: 124081 gccagcaagcaccgccgcctcccgctcg 124108
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 45200 gggcgccgcggcggcggcag 45219
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 111317 gggcgccgcggcggcggcag 111336
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 6767 gagggcgccgcggcggcggc 6786
>dbj|AK111650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130K01, full insert sequence Length = 2340 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gggcgccgcggcggcggcag 472 |||||||||||||||||||| Sbjct: 524 gggcgccgcggcggcggcag 543
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gggaaggcagctgccatgag 314 |||||||||||||||||||| Sbjct: 30547 gggaaggcagctgccatgag 30528
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gggaaggcagctgccatgag 314 |||||||||||||||||||| Sbjct: 27739 gggaaggcagctgccatgag 27720
>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full insert sequence Length = 1380 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gccagcaagcaccagcgcctcccgctcg 451 ||||||||||||| ||||||||||||| Sbjct: 295 gccagcaagcaccgccgcctcccgctcg 322
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gtgcagatccacgccgccaa 416 |||||||||||||||||||| Sbjct: 525617 gtgcagatccacgccgccaa 525598
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gagggcgccgcggcggcggc 470 |||||||||||||||||||| Sbjct: 67267 gagggcgccgcggcggcggc 67248
>emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-638I2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180688 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gggcgccgcggcggcggcagggct 476 |||||||||||||||||| ||||| Sbjct: 47064 gggcgccgcggcggcggcggggct 47041
>gb|AF128442.1|AF128442 Lolium perenne pollen allergen Lol p VA precursor, mRNA, complete cds Length = 1229 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 765 gggcgcggcggcgacggtgg 746
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 gccgcggcggcggcagggct 476 |||||||||||||||||||| Sbjct: 3829594 gccgcggcggcggcagggct 3829613
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gggcgcggcggcgacggtgg 355 |||||||||||||||||||| Sbjct: 2302831 gggcgcggcggcgacggtgg 2302812
>gb|AC090121.37| Mus musculus strain C57BL/6J chromosome 16 clone rp23-141k23, complete sequence Length = 188804 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gctggccagcaagcaccagc 439 |||||||||||||||||||| Sbjct: 51616 gctggccagcaagcaccagc 51635
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a, complete sequence Length = 54726 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 atccacgccgccaacaagct 422 |||||||||||||||||||| Sbjct: 29438 atccacgccgccaacaagct 29457
>emb|AL772387.13| Mouse DNA sequence from clone RP23-133B16 on chromosome 2, complete sequence Length = 195412 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 agctggccagcaagcaccag 438 |||||||||||||||||||| Sbjct: 159998 agctggccagcaagcaccag 159979
>emb|Z14077.1|HSYY1NFE1 H.sapiens mRNA for YY1/NF-E1 protein Length = 1659 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gggcgccgcggcggcggcagggct 476 |||||||||||||||||| ||||| Sbjct: 104 gggcgccgcggcggcggcggggct 81
>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1479 Length = 1223 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 424 gccagcaagcaccagcgcctcccgctcg 451 ||||||||||||| ||||||||||||| Sbjct: 138 gccagcaagcaccgccgcctcccgctcg 165 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,667,993 Number of Sequences: 3902068 Number of extensions: 3667993 Number of successful extensions: 92228 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87797 Number of HSP's gapped (non-prelim): 4428 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
