ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
2dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
3dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
4ref|XM_480882.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
5ref|XM_480883.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
6gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 46 0.11
7ref|NM_190897.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
8ref|NM_190895.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
9emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 46 0.11
10gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 46 0.11
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
13dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
14dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
15dbj|AK111059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
16dbj|AK059758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.11
18gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.43
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
20dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.43
21dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
22dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
23dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.43
25gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.7
26gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.7
27gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.7
28emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.7
29emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.7
30emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
31emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 42 1.7
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
33gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.7
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.7
36dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.7
37dbj|AK104657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
38dbj|AK059739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
39gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.7
40gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genom... 40 6.7
41ref|XM_463110.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
42ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
43ref|NM_184593.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
44gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
45gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 40 6.7
46gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
47gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.7
48gb|AY626367.1| Edwardsiella ictaluri clone pBK195CD hypothetical... 40 6.7
49gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.7
50gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 40 6.7
51gb|AF152394.2| Mycobacterium avium hypothetical protein, beta-la... 40 6.7
52ref|XM_816837.1| Trypanosoma cruzi strain CL Brener serine/threo... 40 6.7
53gb|AC137988.2| Trypanosoma cruzi strain Brener chromosome 3 clon... 40 6.7
54emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.7
55emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.7
56emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 6.7
57emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 6.7
58emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 6.7
59gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 6.7
60emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.7
61emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 6.7
62emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 40 6.7
63gb|AE012451.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.7
64gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.7
65gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine rece... 40 6.7
66gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 40 6.7
67gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.7
68gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.7
69dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
70dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
71gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 40 6.7
72dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.7
73gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the ... 40 6.7
74gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequ... 40 6.7
75dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
76dbj|AK072943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
77dbj|AK067284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
78gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complet... 40 6.7
79gb|AY106757.1| Zea mays PCO140977 mRNA sequence 40 6.7
80gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.7
81dbj|AB089611.1| Serratia marcescens comF, bioH, ORFX, ORF1, ORF2... 40 6.7
82gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.7
83emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosyn... 40 6.7
84emb|AJ271430.1|SSP271430 Shanorella spirotricha 5.8S rRNA gene, ... 40 6.7
85gb|M68877.1|SMASMFEFG Serratia marcescens adhesin (smfE, smfF, a... 40 6.7
86dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthet... 40 6.7 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  222 bits (112), Expect = 8e-55
 Identities = 205/236 (86%)
 Strand = Plus / Minus

                                                                            
Query: 133      cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 192
                ||||| ||| || |||||| | |||||||||||||| ||| ||||||| ||  | || | 
Sbjct: 20638176 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 20638117

                                                                            
Query: 193      ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 252
                ||| || |||||| ||||||||   ||||||||| |||||||||||||||||||||||||
Sbjct: 20638116 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 20638057

                                                                            
Query: 253      cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 312
                |||||| ||||||||||| |||||||| ||||| ||||||||||  ||||||||||||||
Sbjct: 20638056 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 20637997

                                                                        
Query: 313      cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 368
                ||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||
Sbjct: 20637996 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 20637941



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 66/70 (94%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                            
Query: 413      tacctcgtcgtcggcaacgaggtgctcta-aacaaccagttctacgcgccgcacctggtg 471
                ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 20637899 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 20637840

                          
Query: 472      ccggccatgc 481
                || |||||||
Sbjct: 20637839 cccgccatgc 20637830
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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  222 bits (112), Expect = 8e-55
 Identities = 205/236 (86%)
 Strand = Plus / Minus

                                                                         
Query: 133   cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 192
             ||||| ||| || |||||| | |||||||||||||| ||| ||||||| ||  | || | 
Sbjct: 31787 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 31728

                                                                         
Query: 193   ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 252
             ||| || |||||| ||||||||   ||||||||| |||||||||||||||||||||||||
Sbjct: 31727 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 31668

                                                                         
Query: 253   cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 312
             |||||| ||||||||||| |||||||| ||||| ||||||||||  ||||||||||||||
Sbjct: 31667 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 31608

                                                                     
Query: 313   cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 368
             ||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||
Sbjct: 31607 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 31552



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 66/70 (94%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                         
Query: 413   tacctcgtcgtcggcaacgaggtgctcta-aacaaccagttctacgcgccgcacctggtg 471
             ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 31510 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 31451

                       
Query: 472   ccggccatgc 481
             || |||||||
Sbjct: 31450 cccgccatgc 31441
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0515E01
          Length = 140063

 Score =  222 bits (112), Expect = 8e-55
 Identities = 205/236 (86%)
 Strand = Plus / Minus

                                                                          
Query: 133    cgacctggggaacatcggcgtgtgccacggccgcgtgggcggcaacctgccggcccctga 192
              ||||| ||| || |||||| | |||||||||||||| ||| ||||||| ||  | || | 
Sbjct: 103834 cgacccgggcaagatcggcatttgccacggccgcgtcggcagcaaccttccacctccggc 103775

                                                                          
Query: 193    ggcggccgcggcgctgctgaggagtaacgggatcgccaaggcgcggctcttcctccccga 252
              ||| || |||||| ||||||||   ||||||||| |||||||||||||||||||||||||
Sbjct: 103774 ggccgcggcggcgttgctgaggcagaacgggatcaccaaggcgcggctcttcctccccga 103715

                                                                          
Query: 253    cccggccgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgcccaa 312
              |||||| ||||||||||| |||||||| ||||| ||||||||||  ||||||||||||||
Sbjct: 103714 cccggcggtgctcccggcgttcgccgccgccgggatcgacctcatggtcggcgtgcccaa 103655

                                                                      
Query: 313    cgagaacctcaccttcctctccgcgtccgggcccgacggcgcgctgcagtggctgc 368
              ||||||||||||||||||||||||  | ||||||||||||||||| | ||||||||
Sbjct: 103654 cgagaacctcaccttcctctccgccgcggggcccgacggcgcgctccggtggctgc 103599



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 66/70 (94%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                          
Query: 413    tacctcgtcgtcggcaacgaggtgctcta-aacaaccagttctacgcgccgcacctggtg 471
              ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 103557 tacctcgccgtcggcaacgaggtgctgtacaacaaccagttctacgcgccgcacctggtg 103498

                        
Query: 472    ccggccatgc 481
              || |||||||
Sbjct: 103497 cccgccatgc 103488
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>ref|XM_480882.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 264

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 112 gctcgccgcggcggccggcgccg 134
           |||||||||||||||||||||||
Sbjct: 45  gctcgccgcggcggccggcgccg 67
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>ref|XM_480883.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 982

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 112 gctcgccgcggcggccggcgccg 134
           |||||||||||||||||||||||
Sbjct: 60  gctcgccgcggcggccggcgccg 82
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 417     tcgtcgtcggcaacgaggtgctc 439
               |||||||||||||||||||||||
Sbjct: 3492463 tcgtcgtcggcaacgaggtgctc 3492441



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 112     gctcgccgcggcggccggcgccgac 136
               |||||||||| ||||||||||||||
Sbjct: 3223732 gctcgccgcgccggccggcgccgac 3223756
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>ref|NM_190897.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 105 cctcgctgctcgccgcggcggcc 127
           |||||||||||||||||||||||
Sbjct: 839 cctcgctgctcgccgcggcggcc 861
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>ref|NM_190895.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 297

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 105 cctcgctgctcgccgcggcggcc 127
           |||||||||||||||||||||||
Sbjct: 263 cctcgctgctcgccgcggcggcc 285
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 381     tcgccgcgggcccagtcgccggccggc 407
               ||||||| |||||||||||||||||||
Sbjct: 1482205 tcgccgccggcccagtcgccggccggc 1482231
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 58      cacagcggcagcggcgtcgccaa 80
               |||||||||||||||||||||||
Sbjct: 1950980 cacagcggcagcggcgtcgccaa 1950958



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     tcgccgcggcggccggcgcc 133
               ||||||||||||||||||||
Sbjct: 2936562 tcgccgcggcggccggcgcc 2936581
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 112     gctcgccgcggcggccggcgccg 134
               |||||||||||||||||||||||
Sbjct: 8405770 gctcgccgcggcggccggcgccg 8405792
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 105      cctcgctgctcgccgcggcggcc 127
                |||||||||||||||||||||||
Sbjct: 33702259 cctcgctgctcgccgcggcggcc 33702281



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 105      cctcgctgctcgccgcggcggcc 127
                |||||||||||||||||||||||
Sbjct: 33692691 cctcgctgctcgccgcggcggcc 33692713
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>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1217_D10
          Length = 103188

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 112   gctcgccgcggcggccggcgccg 134
             |||||||||||||||||||||||
Sbjct: 21487 gctcgccgcggcggccggcgccg 21509
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>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699H05
          Length = 144850

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   cctcgctgctcgccgcggcggcc 127
             |||||||||||||||||||||||
Sbjct: 55329 cctcgctgctcgccgcggcggcc 55351



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   cctcgctgctcgccgcggcggcc 127
             |||||||||||||||||||||||
Sbjct: 45761 cctcgctgctcgccgcggcggcc 45783
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>dbj|AK111059.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D05, full
           insert sequence
          Length = 555

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 105 cctcgctgctcgccgcggcggcc 127
           |||||||||||||||||||||||
Sbjct: 306 cctcgctgctcgccgcggcggcc 328
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>dbj|AK059758.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E06, full
           insert sequence
          Length = 980

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 112 gctcgccgcggcggccggcgccg 134
           |||||||||||||||||||||||
Sbjct: 60  gctcgccgcggcggccggcgccg 82
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 102     tggcctcgctgctcgccgcggcggccggcgccgac 136
               ||||| |||||| |||||||||||||| |||||||
Sbjct: 3451514 tggccgcgctgcgcgccgcggcggccgacgccgac 3451480



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     cgcggcggccggcgccgacc 137
               ||||||||||||||||||||
Sbjct: 4349097 cgcggcggccggcgccgacc 4349116



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 107     tcgctgctcgccgcggcggccggcgccg 134
               |||||||| ||||| |||||||||||||
Sbjct: 2188537 tcgctgctggccgccgcggccggcgccg 2188510



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     cgccgcggcggccggcgccg 134
               ||||||||||||||||||||
Sbjct: 1926791 cgccgcggcggccggcgccg 1926772
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>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0061D06, complete sequence
          Length = 172126

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 113   ctcgccgcggcggccggcgccg 134
             ||||||||||||||||||||||
Sbjct: 93417 ctcgccgcggcggccggcgccg 93396



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   tgctcgccgcggcggccggcg 131
             |||||||||||||||||||||
Sbjct: 75116 tgctcgccgcggcggccggcg 75096
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 113     ctcgccgcggcggccggcgccg 134
               ||||||||||||||||||||||
Sbjct: 9656260 ctcgccgcggcggccggcgccg 9656281



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 111     tgctcgccgcggcggccggcg 131
               |||||||||||||||||||||
Sbjct: 9674561 tgctcgccgcggcggccggcg 9674581
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 100     cctggcctcgctgctcgccgcggcggccggcgcc 133
               |||||||  |||||||||||||||||||| ||||
Sbjct: 3497311 cctggcccggctgctcgccgcggcggccgacgcc 3497344



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 112     gctcgccgcggcggccggcgccgacctgg 140
               |||||||||||||| ||| ||||||||||
Sbjct: 2444120 gctcgccgcggcgggcggtgccgacctgg 2444092



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    gctgctcgccgcggcggccggcgc 132
              ||||||||||||||| ||||||||
Sbjct: 127379 gctgctcgccgcggccgccggcgc 127356
to top
>dbj|AK104507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G07, full
           insert sequence
          Length = 938

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 ctcgccgcggcggccggcgccg 134
           ||||||||||||||||||||||
Sbjct: 49  ctcgccgcggcggccggcgccg 70
to top
>dbj|AK067288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100O03, full
           insert sequence
          Length = 896

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 ctcgccgcggcggccggcgccg 134
           ||||||||||||||||||||||
Sbjct: 64  ctcgccgcggcggccggcgccg 85
to top
>dbj|AK066677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071C10, full
           insert sequence
          Length = 954

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 ctcgccgcggcggccggcgccg 134
           ||||||||||||||||||||||
Sbjct: 53  ctcgccgcggcggccggcgccg 74
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 113     ctcgccgcggcggccggcgccg 134
               ||||||||||||||||||||||
Sbjct: 9727957 ctcgccgcggcggccggcgccg 9727978



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 111     tgctcgccgcggcggccggcg 131
               |||||||||||||||||||||
Sbjct: 9746258 tgctcgccgcggcggccggcg 9746278
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 294     tcaccgtcggcgtgcccaacg 314
               |||||||||||||||||||||
Sbjct: 2104246 tcaccgtcggcgtgcccaacg 2104226
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 342    ggcccgacggcgcgctgcagt 362
              |||||||||||||||||||||
Sbjct: 282976 ggcccgacggcgcgctgcagt 282956



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     tgctcgccgcggcggccggc 130
               ||||||||||||||||||||
Sbjct: 2262683 tgctcgccgcggcggccggc 2262664
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 379    gctcgccgcgggcccagtcgccggccggc 407
              ||||||||| |||||||||||||| ||||
Sbjct: 978407 gctcgccgccggcccagtcgccgggcggc 978379
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>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16
          Length = 348068

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   ccttcgccgcggccggcatcg 290
             |||||||||||||||||||||
Sbjct: 63971 ccttcgccgcggccggcatcg 63991
to top
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    tcgccgcggcggccggcgccg 134
              |||||||||||||||||||||
Sbjct: 277127 tcgccgcggcggccggcgccg 277147
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 342     ggcccgacggcgcgctgcagt 362
               |||||||||||||||||||||
Sbjct: 1608771 ggcccgacggcgcgctgcagt 1608751
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   ctgctcgccgcggcggccggcgccg 134
             ||||||||||||||||||| |||||
Sbjct: 48222 ctgctcgccgcggcggccgccgccg 48246
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 415     cctcgtcgtcggcaacgaggt 435
               |||||||||||||||||||||
Sbjct: 3565306 cctcgtcgtcggcaacgaggt 3565286
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 279     cggccggcatcgacctcaccg 299
               |||||||||||||||||||||
Sbjct: 1322952 cggccggcatcgacctcaccg 1322972
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     ctccgcgtccgggcccgacgg 351
               |||||||||||||||||||||
Sbjct: 7173179 ctccgcgtccgggcccgacgg 7173159



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     ctcccggccttcgccgcggc 282
               ||||||||||||||||||||
Sbjct: 4527298 ctcccggccttcgccgcggc 4527279
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 113     ctcgccgcggcggccggcgccgacc 137
               ||||||||||| |||||||||||||
Sbjct: 3550478 ctcgccgcggccgccggcgccgacc 3550454



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     ccgggcccgacggcgcgctgc 359
               |||||||||||||||||||||
Sbjct: 2154749 ccgggcccgacggcgcgctgc 2154729



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 417     tcgtcgtcggcaacgaggtgctct 440
               ||||||||||||||||||| ||||
Sbjct: 1973795 tcgtcgtcggcaacgaggtcctct 1973772



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 110     ctgctcgccgcggcggccggcgccgacc 137
               |||| |||||| ||||||||||||||||
Sbjct: 1836569 ctgcgcgccgccgcggccggcgccgacc 1836542



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     cgccgcggcggccggcgccg 134
               ||||||||||||||||||||
Sbjct: 1325837 cgccgcggcggccggcgccg 1325856
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 266     ccggccttcgccgcggccggcatcg 290
               |||| ||||||||||||||||||||
Sbjct: 5760544 ccggtcttcgccgcggccggcatcg 5760568
to top
>dbj|AK104657.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D03, full
           insert sequence
          Length = 1036

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 111 tgctcgccgcggcggccggcg 131
           |||||||||||||||||||||
Sbjct: 68  tgctcgccgcggcggccggcg 88
to top
>dbj|AK059739.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F02, full
           insert sequence
          Length = 1044

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 111 tgctcgccgcggcggccggcg 131
           |||||||||||||||||||||
Sbjct: 68  tgctcgccgcggcggccggcg 88
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 112     gctcgccgcggcggccggcgc 132
               |||||||||||||||||||||
Sbjct: 2008551 gctcgccgcggcggccggcgc 2008531
to top
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
              sequence
          Length = 157397

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cgccgcggcggccggcgccg 134
              ||||||||||||||||||||
Sbjct: 113593 cgccgcggcggccggcgccg 113612
to top
>ref|XM_463110.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 cgccgcggcggccggcgccg 134
           ||||||||||||||||||||
Sbjct: 216 cgccgcggcggccggcgccg 235
to top
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1631

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 413 tacctcgtcgtcggcaacgaggtgctct 440
           |||||| |||||||||||||||| ||||
Sbjct: 340 tacctcttcgtcggcaacgaggtcctct 367
to top
>ref|NM_184593.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cctgaggcggccgcggcgctgctg 211
           |||| |||||||||||||||||||
Sbjct: 783 cctgcggcggccgcggcgctgctg 760
to top
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14,
              complete sequence
          Length = 185623

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    cgtcggcaacgaggtgctct 440
              ||||||||||||||||||||
Sbjct: 110861 cgtcggcaacgaggtgctct 110842
to top
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 259   cgtgctcccggccttcgccgcggccggcatcgacctcaccgtcggcgtgccc 310
             ||||||||  ||||||||||   ||||  ||||| |||||||||||||||||
Sbjct: 64375 cgtgctccgcgccttcgccggctccggggtcgacttcaccgtcggcgtgccc 64324
to top
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
              complete sequence
          Length = 160142

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    cgtcggcaacgaggtgctct 440
              ||||||||||||||||||||
Sbjct: 150088 cgtcggcaacgaggtgctct 150069
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 258    ccgtgctcccggccttcgccgcgg 281
              |||||||| |||||||||||||||
Sbjct: 477992 ccgtgctcacggccttcgccgcgg 478015
to top
>gb|AY626367.1| Edwardsiella ictaluri clone pBK195CD hypothetical protein genes,
            complete cds; and hypothetical protein gene, partial cds
          Length = 5094

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  gctcgccgcggcggccggcg 131
            ||||||||||||||||||||
Sbjct: 3921 gctcgccgcggcggccggcg 3940
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 413      tacctcgtcgtcggcaacgaggtgctct 440
                |||||| |||||||||||||||| ||||
Sbjct: 35256954 tacctcttcgtcggcaacgaggtcctct 35256927



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      cgccgcggcggccggcgccg 134
                ||||||||||||||||||||
Sbjct: 22554553 cgccgcggcggccggcgccg 22554534



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 188      cctgaggcggccgcggcgctgctg 211
                |||| |||||||||||||||||||
Sbjct: 14376994 cctgcggcggccgcggcgctgctg 14377017
to top
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
              sequence
          Length = 156606

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 413    tacctcgtcgtcggcaacgaggtgctct 440
              |||||| |||||||||||||||| ||||
Sbjct: 135715 tacctcttcgtcggcaacgaggtcctct 135688
to top
>gb|AF152394.2| Mycobacterium avium hypothetical protein, beta-lactamase-like protein
            (bllp), F420-dependent glucose-6-phosphate dehydrogenase
            (fgd), phospotransacetylase (pta), acetate kinase (ack),
            and hypothetical proteins genes, complete cds; and
            unknown gene
          Length = 7849

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  cgcggcggccggcgccgacc 137
            ||||||||||||||||||||
Sbjct: 5909 cgcggcggccggcgccgacc 5928
to top
>ref|XM_816837.1| Trypanosoma cruzi strain CL Brener serine/threonine protein
            phosphatase (Tc00.1047053506529.380) partial mRNA
          Length = 2772

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ctcgtcgtcggcaacgaggt 435
            ||||||||||||||||||||
Sbjct: 2073 ctcgtcgtcggcaacgaggt 2054
to top
>gb|AC137988.2| Trypanosoma cruzi strain Brener chromosome 3 clone cosmids 1o17, 1m17,
             1b21, 2n11, complete sequence
          Length = 105864

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ctcgtcgtcggcaacgaggt 435
             ||||||||||||||||||||
Sbjct: 85051 ctcgtcgtcggcaacgaggt 85032
to top
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   gccgcggcggccggcgccga 135
             ||||||||||||||||||||
Sbjct: 58686 gccgcggcggccggcgccga 58667
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 99     tcctggcctcgctgctcgccgcggcggccggc 130
              |||||||||||||||| || |||| |||||||
Sbjct: 197032 tcctggcctcgctgctggcggcggtggccggc 197063
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   gccgcggcggccggcgccga 135
             ||||||||||||||||||||
Sbjct: 11490 gccgcggcggccggcgccga 11471
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 99     tcctggcctcgctgctcgccgcggcggccggc 130
              |||||||||||||||| || |||| |||||||
Sbjct: 321077 tcctggcctcgctgctggcggcggtggccggc 321108
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gccgcggcggccggcgccga 135
              ||||||||||||||||||||
Sbjct: 128691 gccgcggcggccggcgccga 128672
to top
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 64      ggcagcggcgtcgccaatgcgttt 87
               ||||||||||||| ||||||||||
Sbjct: 1447876 ggcagcggcgtcggcaatgcgttt 1447899
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   gccacggccgcgtgggcggc 175
             ||||||||||||||||||||
Sbjct: 59692 gccacggccgcgtgggcggc 59673
to top
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    gctgctcgccgcggcggccggcgc 132
              |||||||||| |||||||||||||
Sbjct: 213586 gctgctcgccccggcggccggcgc 213609
to top
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ctgctcgccgcggcggccgg 129
              ||||||||||||||||||||
Sbjct: 139729 ctgctcgccgcggcggccgg 139748
to top
>gb|AE012451.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 359
            of 460 of the complete genome
          Length = 10291

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 355  gctgcagtggctgcgctcgaacgg 378
            |||||||||||||||| |||||||
Sbjct: 5488 gctgcagtggctgcgcccgaacgg 5511
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 350     ggcgcgctgcagtggctgcg 369
               ||||||||||||||||||||
Sbjct: 1545010 ggcgcgctgcagtggctgcg 1545029
to top
>gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine receptor 1 (Cx3cr1), C-C
              motif chemokine receptor 8 (Ccr8), ribosomal protein SA
              (Rpsa), and myelin-associated oligodendrocytic basic
              protein (Mobp) genes, complete cds
          Length = 200011

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     tcctcctggcctcgctgctc 115
              ||||||||||||||||||||
Sbjct: 176191 tcctcctggcctcgctgctc 176210
to top
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    cctgaggcggccgcggcgctgctg 211
              |||| |||||||||||||||||||
Sbjct: 126223 cctgcggcggccgcggcgctgctg 126246
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 355    gctgcagtggctgcgctcgaacgg 378
              |||||||||||||||| |||||||
Sbjct: 996598 gctgcagtggctgcgcccgaacgg 996575
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     tgctcgccgcggcggccggc 130
               ||||||||||||||||||||
Sbjct: 1564351 tgctcgccgcggcggccggc 1564370
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 421      cgtcggcaacgaggtgctct 440
                ||||||||||||||||||||
Sbjct: 21557005 cgtcggcaacgaggtgctct 21556986
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 413      tacctcgtcgtcggcaacgaggtgctct 440
                |||||| |||||||||||||||| ||||
Sbjct: 35347026 tacctcttcgtcggcaacgaggtcctct 35346999



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      cgccgcggcggccggcgccg 134
                ||||||||||||||||||||
Sbjct: 22547582 cgccgcggcggccggcgccg 22547563



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 188      cctgaggcggccgcggcgctgctg 211
                |||| |||||||||||||||||||
Sbjct: 14371969 cctgcggcggccgcggcgctgctg 14371992
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
              sequence
          Length = 116443

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 413    tacctcgtcgtcggcaacgaggtgctct 440
              |||||| |||||||||||||||| ||||
Sbjct: 111500 tacctcttcgtcggcaacgaggtcctct 111527
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     ccttcgccgcggccggcatc 289
               ||||||||||||||||||||
Sbjct: 2928836 ccttcgccgcggccggcatc 2928817
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>gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the complete genome
          Length = 11487

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  cggcatcgacctcaccgtcg 302
            ||||||||||||||||||||
Sbjct: 5581 cggcatcgacctcaccgtcg 5562
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>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence
          Length = 35159

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 94    cgtcctcctggcctcgctgctcgccgcg 121
             ||||||||||||| |||||||| |||||
Sbjct: 21173 cgtcctcctggccgcgctgctctccgcg 21146
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>dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H05, full
           insert sequence
          Length = 1631

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 413 tacctcgtcgtcggcaacgaggtgctct 440
           |||||| |||||||||||||||| ||||
Sbjct: 340 tacctcttcgtcggcaacgaggtcctct 367
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>dbj|AK072943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148N05, full
           insert sequence
          Length = 2634

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 cgtcggcaacgaggtgctct 440
           ||||||||||||||||||||
Sbjct: 479 cgtcggcaacgaggtgctct 498
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>dbj|AK067284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100P21, full
           insert sequence
          Length = 2768

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 cgtcggcaacgaggtgctct 440
           ||||||||||||||||||||
Sbjct: 423 cgtcggcaacgaggtgctct 442
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>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence
          Length = 222792

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     tcctcctggcctcgctgctc 115
              ||||||||||||||||||||
Sbjct: 131692 tcctcctggcctcgctgctc 131711
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>gb|AY106757.1| Zea mays PCO140977 mRNA sequence
          Length = 450

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  cgtcctcctggcctcgctgc 113
           ||||||||||||||||||||
Sbjct: 220 cgtcctcctggcctcgctgc 239
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 250     cgacccggccgtgctcccggcctt 273
               ||||||||||||||||| ||||||
Sbjct: 1608682 cgacccggccgtgctccaggcctt 1608659
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>dbj|AB089611.1| Serratia marcescens comF, bioH, ORFX, ORF1, ORF2, feoB genes, partial
            and complete cds
          Length = 2837

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   cagcggcagcggcgtcgcca 79
            ||||||||||||||||||||
Sbjct: 1909 cagcggcagcggcgtcgcca 1928
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 114     tcgccgcggcggccggcgcc 133
               ||||||||||||||||||||
Sbjct: 2347352 tcgccgcggcggccggcgcc 2347333
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>emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosynthesis gene cluster,
            strain DSM 43868
          Length = 47238

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  cttcgccgcggccggcatcg 290
            ||||||||||||||||||||
Sbjct: 8053 cttcgccgcggccggcatcg 8072
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>emb|AJ271430.1|SSP271430 Shanorella spirotricha 5.8S rRNA gene, internal transcribed spacer
           1 (ITS1) and internal transcribed spacer 2 (ITS2),
           strain CBS 305.56
          Length = 617

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 68  gcggcgtcgccaatgcgtttcggc 91
           |||||||||||| |||||||||||
Sbjct: 474 gcggcgtcgccactgcgtttcggc 451
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>gb|M68877.1|SMASMFEFG Serratia marcescens adhesin (smfE, smfF, and smfG) genes, complete
            cds
          Length = 2251

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  ctggcctcgctgctcgccgc 120
            ||||||||||||||||||||
Sbjct: 1096 ctggcctcgctgctcgccgc 1077
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>dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthetic gene cluster
          Length = 24790

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ctcccggccttcgccgcggc 282
             ||||||||||||||||||||
Sbjct: 17368 ctcccggccttcgccgcggc 17387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,117,761
Number of Sequences: 3902068
Number of extensions: 3117761
Number of successful extensions: 82143
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73880
Number of HSP's gapped (non-prelim): 8257
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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