ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189197.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 46.1 bits (23), Expect = 0.012 Identities = 26/27 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccac 63 |||||||| |||||||||||||||||| Sbjct: 33 cctcgtcctccgccgcctcctctccac 59
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.012 Identities = 26/27 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctccac 63 |||||||| |||||||||||||||||| Sbjct: 11066753 cctcgtcctccgccgcctcctctccac 11066727 Score = 44.1 bits (22), Expect = 0.046 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccaccgc 66 |||| ||| ||||||||||||||||||||| Sbjct: 9224375 cctcctcctccgccgcctcctctccaccgc 9224404 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 24480692 ccgccgcctcctctccaccg 24480711 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 40042317 ccgccgccgcctcctctcc 40042299 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 9343925 ccgccgccgcctcctctcc 9343907 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 3786439 ccgccgccgcctcctctcc 3786421
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 46.1 bits (23), Expect = 0.012 Identities = 26/27 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctccac 63 |||||||| |||||||||||||||||| Sbjct: 95635 cctcgtcctccgccgcctcctctccac 95609
>dbj|AK073246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005A18, full insert sequence Length = 2211 Score = 46.1 bits (23), Expect = 0.012 Identities = 26/27 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccac 63 |||||||| |||||||||||||||||| Sbjct: 93 cctcgtcctccgccgcctcctctccac 119
>dbj|AK066192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054P19, full insert sequence Length = 1979 Score = 46.1 bits (23), Expect = 0.012 Identities = 26/27 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccac 63 |||||||| |||||||||||||||||| Sbjct: 99 cctcgtcctccgccgcctcctctccac 125
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 44.1 bits (22), Expect = 0.046 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccacc 64 |||||||||||||||||||||| Sbjct: 26999 ccgccgccgcctcctctccacc 27020 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 61114 ccgccgccgcctcctctcc 61132
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 44.1 bits (22), Expect = 0.046 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccacc 64 |||||||||||||||||||||| Sbjct: 131709 ccgccgccgcctcctctccacc 131730
>emb|Z93929.1|HS272E8 Human DNA sequence from clone RP1-272E8 on chromosome Xp22.13-22.31 Contains a pseudogene similar to MDM2-Like P53-binding protein, the 5' end of the RAI2 gene for retinoic acid induced 2 and one CpG island, complete sequence Length = 117968 Score = 44.1 bits (22), Expect = 0.046 Identities = 25/26 (96%) Strand = Plus / Minus Query: 33 tgtccctcgtccgccgccgcctcctc 58 |||||||| ||||||||||||||||| Sbjct: 9382 tgtccctcctccgccgccgcctcctc 9357
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 44.1 bits (22), Expect = 0.046 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctc 58 |||||||||||||||||||||| Sbjct: 1445531 cctcgtccgccgccgcctcctc 1445552
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.046 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccacc 64 |||||||||||||||||||||| Sbjct: 9255054 ccgccgccgcctcctctccacc 9255075 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 3664865 tccgccgccgcctcctctcc 3664884 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 27309245 ccgccgccgcctcctctcc 27309263 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcct 57 |||||| |||||||||||||||| Sbjct: 15020554 tccctcctccgccgccgcctcct 15020532 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 12894041 ccgccgcctcctctccacc 12894059 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 9289169 ccgccgccgcctcctctcc 9289187
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 44.1 bits (22), Expect = 0.046 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccaccgc 66 |||| ||| ||||||||||||||||||||| Sbjct: 969 cctcctcctccgccgcctcctctccaccgc 998 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 120519 ccgccgccgcctcctctcc 120501
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 44.1 bits (22), Expect = 0.046 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccaccgc 66 |||| ||| ||||||||||||||||||||| Sbjct: 124757 cctcctcctccgccgcctcctctccaccgc 124786
>dbj|AK102391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092E15, full insert sequence Length = 2778 Score = 44.1 bits (22), Expect = 0.046 Identities = 28/30 (93%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctccaccgc 66 |||| ||| ||||||||||||||||||||| Sbjct: 164 cctcctcctccgccgcctcctctccaccgc 193
>gb|AY172976.1| Zea mays SET domain protein 123 mRNA, complete cds Length = 1176 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||| |||||||||||||| Sbjct: 25 tccgccgccgtctcctctccaccgc 49
>ref|XM_471149.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 |||| |||||||||||||||||||| Sbjct: 45 cctcctccgccgccgcctcctctcc 69
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.18 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccaccgc 66 ||||||||||||||||||||| Sbjct: 8088557 ccgccgcctcctctccaccgc 8088537 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgcag 68 |||||||||||||||| |||||| Sbjct: 5838608 ccgccgcctcctctccgccgcag 5838630
>gb|AC126242.3| Mus musculus BAC clone RP24-249E21 from chromosome 10, complete sequence Length = 177581 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 30732 cctcgtccgccgccgccgcctctcc 30708
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 |||| |||||||||||||||||||| Sbjct: 148760 cctcctccgccgccgcctcctctcc 148784
>dbj|AK147830.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270057H11 product:mitogen-activated protein kinase kinase kinase 7 interacting protein 2, full insert sequence Length = 2005 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 104 cctcgtccgccgccgccgcctctcc 80
>dbj|AK089164.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630001D19 product:SIMILAR TO TAK1-BINDING PROTEIN 2, KIAA0733 PROTEIN homolog [Mus musculus], full insert sequence Length = 2038 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 293 cctcgtccgccgccgccgcctctcc 269
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 |||| |||||||||||||||||||| Sbjct: 1853492 cctcctccgccgccgcctcctctcc 1853516 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 33263497 ccgccgccgcctcctctcc 33263515 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 ||||| ||||||||||||||||| Sbjct: 29525875 ccctcctccgccgccgcctcctc 29525897 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 23399730 ccgccgccgcctcctctcc 23399712 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcct 54 ||||||||||||||||||| Sbjct: 407032 ccctcgtccgccgccgcct 407050
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||||||||||| |||||| Sbjct: 13748507 tccgccgccgcctcctctgcaccgc 13748483 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 3447100 ccgccgccgcctcccctccaccgc 3447123 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 21765487 cgtccgccgccgcctcctc 21765469
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.18 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccaccgc 66 ||||||||||||||||||||| Sbjct: 8086392 ccgccgcctcctctccaccgc 8086372 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgcag 68 |||||||||||||||| |||||| Sbjct: 5837821 ccgccgcctcctctccgccgcag 5837843
>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186215 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 24979 cctcgtccgccgccgccgcctctcc 25003
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 42.1 bits (21), Expect = 0.18 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccaccgc 66 ||||||||||||||||||||| Sbjct: 19987 ccgccgcctcctctccaccgc 19967
>ref|XM_574265.1| PREDICTED: Rattus norvegicus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (predicted) (Map3k7ip2_predicted), mRNA Length = 4059 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 56 cctcgtccgccgccgccgcctctcc 32
>gb|AC027659.1| Oryza sativa (japonica cultivar-group) BAC nbxb0015J03 chromosome 10, complete sequence Length = 172742 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||||||||||| |||||| Sbjct: 75036 tccgccgccgcctcctctgcaccgc 75012
>dbj|AK120111.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024I20, full insert sequence Length = 2594 Score = 42.1 bits (21), Expect = 0.18 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgc 66 ||||||||||||||||||||| Sbjct: 122 ccgccgcctcctctccaccgc 142
>dbj|AK111981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E07, full insert sequence Length = 1237 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||||||||||| |||||| Sbjct: 59 tccgccgccgcctcctctgcaccgc 83
>dbj|AK111906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058P06, full insert sequence Length = 1233 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||||||||||| |||||| Sbjct: 57 tccgccgccgcctcctctgcaccgc 81
>dbj|AK073753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069J06, full insert sequence Length = 991 Score = 42.1 bits (21), Expect = 0.18 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgc 66 ||||||||||||||||||||| Sbjct: 122 ccgccgcctcctctccaccgc 142
>dbj|AK070089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041J01, full insert sequence Length = 1108 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 |||| |||||||||||||||||||| Sbjct: 101 cctcctccgccgccgcctcctctcc 125
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctccaccgc 66 |||||||||||||||||| |||||| Sbjct: 13755849 tccgccgccgcctcctctgcaccgc 13755825 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 3447021 ccgccgccgcctcccctccaccgc 3447044 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 21777150 cgtccgccgccgcctcctc 21777132
>gb|AC092856.26| Mus musculus strain C57BL/6J chromosome 10 clone rp23-7p15, complete sequence Length = 221799 Score = 42.1 bits (21), Expect = 0.18 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctctcc 61 ||||||||||||||||| ||||||| Sbjct: 172215 cctcgtccgccgccgccgcctctcc 172239
>ref|NM_194927.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNAa0034B05.12), mRNA Length = 1140 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 36 ccgccgccgcctcccctccaccgc 59
>ref|XM_464467.1| Oryza sativa (japonica cultivar-group), mRNA Length = 264 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 42 tccctcttccgccgccgcctcctc 19
>ref|XM_464466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2270 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 11 tccctcttccgccgccgcctcctc 34
>ref|NM_192798.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 33 ccgccgcctcctctccaccg 52
>ref|XM_479028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4485 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 57 ccgccgcctcctcctctccaccgc 80
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 158085 tccgccgccgcctcctctcc 158066
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 16034 ccgccgcctcctcctctccaccgc 16057
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 38229 ccgccgccgcctcccctccaccgc 38252
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aatgtccctcgtccgccgccgcct 54 ||||| |||||||||||||||||| Sbjct: 153289 aatgttcctcgtccgccgccgcct 153312
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 87212 tccgccgccgcctcctctcc 87231
>gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0016O23, complete sequence Length = 149400 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 68844 ccgccgcctcctctccaccg 68863
>emb|AL354685.17| Human DNA sequence from clone RP13-75G22 on chromosome Xq21.33-22.2 Contains the gene for a novel protein similar to envelope protein (LOC139302), a pseuodgene similar to part of NCK-associated protein 1 (NCKAP1) and a CpG island, complete sequence Length = 155166 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ttctctgcattcccaaatgt 35 |||||||||||||||||||| Sbjct: 131815 ttctctgcattcccaaatgt 131796
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 68850 ccgccgcctcctcctctccaccgc 68873
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 103884 ccgccgccgcctcccctccaccgc 103907
>gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, complete sequence Length = 95865 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctgcattcccaaatgtccct 39 |||||||||||||||||||| Sbjct: 28453 ctgcattcccaaatgtccct 28434
>gb|AC011394.5| Homo sapiens chromosome 5 clone CTB-179K12, complete sequence Length = 86973 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gatctcttctctgcattcccaaat 33 ||||| |||||||||||||||||| Sbjct: 8575 gatctattctctgcattcccaaat 8552
>gb|AC026407.4| Homo sapiens chromosome 5 clone CTC-370J7, complete sequence Length = 155344 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gatctcttctctgcattcccaaat 33 ||||| |||||||||||||||||| Sbjct: 37158 gatctattctctgcattcccaaat 37181
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 23880029 ccgccgcctcctctccaccg 23880048 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 5281365 ccgccgcctcctcctctccaccgc 5281342 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 25291630 ccgccgcctcctctccacc 25291648 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 1446499 ccctcgaccgccgccgcctcctc 1446521
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 24408800 ccgccgcctcctcctctccaccgc 24408777 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 25461721 ccgccgcctcctctccacc 25461739 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 24567696 ccgccgccgcctcctctcc 24567714 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 7342487 ccgccgccgcctcctctcc 7342505 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 2552001 ccgccgcctcctctccacc 2552019 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctc 60 ||||||||||||||||||| Sbjct: 699173 tccgccgccgcctcctctc 699155
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 5468073 tccgccgccgcctcctctcc 5468054 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 5380152 tccctcttccgccgccgcctcctc 5380129 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccg 65 |||||||||| |||||||||||| Sbjct: 22093316 ccgccgccgcatcctctccaccg 22093294 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 21331424 cgtccgccgccgcctcctc 21331442 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 5645909 ccgccgccgcctcctctcc 5645891
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctct 59 ||||||||| |||||||||||||| Sbjct: 1111305 ccctcgtccaccgccgcctcctct 1111328
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 121654 tccgccgccgcctcctctcc 121635 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 33733 tccctcttccgccgccgcctcctc 33710
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 61076 ccgccgcctcctctccaccg 61095
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 12808 tccgccgccgcctcctctcc 12789
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 34667 ccgccgcctcctcctctccaccgc 34644
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 106455 tccctcttccgccgccgcctcctc 106432
>dbj|AK120340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060N21, full insert sequence Length = 6226 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 38 tccgccgccgcctcctctcc 19
>dbj|AK106311.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D04, full insert sequence Length = 1685 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 122 tccgccgccgcctcctctcc 103
>dbj|AK105298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H04, full insert sequence Length = 1271 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 46 tccgccgccgcctcctctcc 65
>dbj|AK101490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042I09, full insert sequence Length = 1336 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 47 ccgccgcctcctctccaccg 66
>dbj|AK100873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126C15, full insert sequence Length = 1535 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 190 ccgccgcctcctcctctccaccgc 213
>dbj|AK073342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030D14, full insert sequence Length = 2057 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctcc 61 |||||||||||||||||||| Sbjct: 162 tccgccgccgcctcctctcc 143
>dbj|AK070930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074M13, full insert sequence Length = 1311 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||||||||| ||||||||| Sbjct: 90 ccgccgccgcctcccctccaccgc 113
>dbj|AK069688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034A08, full insert sequence Length = 1493 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 165 ccgccgcctcctcctctccaccgc 188
>dbj|AK066028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H11, full insert sequence Length = 2270 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 tccctcgtccgccgccgcctcctc 58 |||||| ||||||||||||||||| Sbjct: 11 tccctcttccgccgccgcctcctc 34
>dbj|AK063911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A07, full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 67 ccgccgcctcctctccaccg 86
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 0.72 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccg 65 |||||||||||||||||||| Sbjct: 24191698 ccgccgcctcctctccaccg 24191717 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccgc 66 |||||||| ||||||||||||||| Sbjct: 5347842 ccgccgcctcctcctctccaccgc 5347819 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 25610300 ccgccgcctcctctccacc 25610318 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 1444220 ccctcgaccgccgccgcctcctc 1444242
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctct 59 ||||||||| |||||||||||||| Sbjct: 784664 ccctcgtccaccgccgcctcctct 784687
>dbj|AB064549.1| Thermus thermophilus recJ gene for single-stranded DNA specific exonuclease RecJ, complete cds Length = 2001 Score = 40.1 bits (20), Expect = 0.72 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctct 59 ||||||||| |||||||||||||| Sbjct: 1883 ccctcgtccaccgccgcctcctct 1906
>gb|AC102739.7| Mus musculus chromosome 5, clone RP24-309H3, complete sequence Length = 191542 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 gatctcttctctgcattcc 28 ||||||||||||||||||| Sbjct: 112065 gatctcttctctgcattcc 112083
>ref|NM_188049.1| Oryza sativa (japonica cultivar-group), Ozsa8469 predicted mRNA Length = 978 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 188 ccgccgccgcctcctctcc 170
>ref|XM_481590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 605 ccgccgccgcctcctctcc 587
>ref|XM_474147.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1611 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 525 ccgccgccgcctcctctcc 507
>ref|XM_466023.1| Oryza sativa (japonica cultivar-group), mRNA Length = 759 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 ccctcgtccgccgccgcctcctc 58 ||||||||||||||||| ||||| Sbjct: 129 ccctcgtccgccgccgcgtcctc 107
>ref|XM_466261.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 29 cgtccgccgccgcctcctc 47
>ref|XM_450867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 155 ccgccgccgcctcctctcc 137
>ref|NM_197774.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027P10.21), mRNA Length = 1011 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 586 cgtccgccgccgcctcctc 568
>ref|XM_517479.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC461537), mRNA Length = 3432 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 285 ccgccgccgcctcctctcc 303
>ref|NM_189960.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 663 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 160 ccgccgccgcctcctctcc 178
>ref|NM_189830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 351 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 70 ccgccgcctcctctccacc 88
>ref|XM_479065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3665 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 214 ccgccgccgcctcctctcc 232
>ref|NM_194114.2| Oryza sativa (japonica cultivar-group), mRNA Length = 859 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctc 60 ||||||||||||||||||| Sbjct: 567 tccgccgccgcctcctctc 585
>ref|XM_473669.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 ccctcgtccgccgccgcctcctc 58 ||||| ||||||||||||||||| Sbjct: 308 ccctcctccgccgccgcctcctc 286
>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0076A09, complete sequence Length = 157010 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 35 tccctcgtccgccgccgcctcct 57 |||||| |||||||||||||||| Sbjct: 49304 tccctcctccgccgccgcctcct 49282
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ctcgtccgccgccgcctcc 56 ||||||||||||||||||| Sbjct: 1184576 ctcgtccgccgccgcctcc 1184558
>ref|XM_588257.2| PREDICTED: Bos taurus similar to LysM, putative peptidoglycan-binding, domain containing 2 (LOC511013), mRNA Length = 1180 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||||||||||||| |||||||| Sbjct: 387 cctcgtccgccgccacctcctct 365
>ref|XM_583769.2| PREDICTED: Bos taurus arginine vasopressin receptor 1B (AVPR1B), mRNA Length = 2664 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctccacc 64 |||||||| |||||||||||||| Sbjct: 342 tccgccgctgcctcctctccacc 364
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 184213 ccgccgccgcctcctctcc 184231
>ref|XM_414401.1| PREDICTED: Gallus gallus similar to protein kinase (EC 2.7.1.37), cAMP-dependent, type II-alpha regulatory chain - bovine (LOC416063), mRNA Length = 2030 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 632 ccgccgccgcctcctctcc 614
>ref|XM_417102.1| PREDICTED: Gallus gallus similar to neurobeachin (LOC418906), mRNA Length = 7080 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 511 cgtccgccgccgcctcctc 493
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 21702 ccgccgccgcctcctctcc 21720
>ref|NM_009234.5| Mus musculus SRY-box containing gene 11 (Sox11), mRNA Length = 7497 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 120 ccgccgccgcctcctctcc 138
>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence Length = 175034 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 10616 tgcattcccaaatgtccct 10598
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 1999447 ccgccgccgcctcctctcc 1999465
>ref|NM_009574.2| Mus musculus Zic finger protein of the cerebellum 2 (Zic2), mRNA Length = 2445 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 5 cctcctccgccgccgcctcctct 27
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 54587 ccgccgcctcctctccacc 54605
>gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, complete sequence Length = 181148 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 143688 tgcattcccaaatgtccct 143670
>ref|XM_848208.1| PREDICTED: Canis familiaris similar to inhibitor of DNA binding 4 (LOC610666), mRNA Length = 360 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 ctcgtccgccgccgcctcc 56 ||||||||||||||||||| Sbjct: 174 ctcgtccgccgccgcctcc 156
>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029P13, complete sequence Length = 158506 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 18643 ccgccgcctcctctccacc 18661
>gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, complete sequence Length = 188603 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 54257 tgcattcccaaatgtccct 54275
>gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, complete sequence Length = 165128 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 106085 tgcattcccaaatgtccct 106067
>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence Length = 212954 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 176044 tgcattcccaaatgtccct 176026
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgcag 68 |||||||||||||||| |||||| Sbjct: 67438 ccgccgcctcctctccgccgcag 67460
>emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chromosome 10, complete sequence Length = 158093 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ttctctgcattcccaaatg 34 ||||||||||||||||||| Sbjct: 147503 ttctctgcattcccaaatg 147521
>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0051D10, complete sequence Length = 140272 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 54112 ccgccgcctcctctccacc 54094
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 65294 ccctcgaccgccgccgcctcctc 65316
>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence Length = 204130 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 gtgagatctcttctctgca 24 ||||||||||||||||||| Sbjct: 123408 gtgagatctcttctctgca 123426
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 17816 cctcctccgccgccgcctcctct 17794
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 265784 ccctcggccgccgccgcctcctc 265806
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 117051 ccgccgccgcctcctctcc 117033
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 35758 ccgccgccgcctcctctcc 35776
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 ||||| ||||||||||||||||| Sbjct: 28564 ccctcctccgccgccgcctcctc 28586
>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 169138 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 109634 cctcctccgccgccgcctcctct 109612
>gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chromosome y, complete sequence Length = 200911 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 36880 tgcattcccaaatgtccct 36898
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 12529693 tgcattcccaaatgtccct 12529675 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 11885133 tgcattcccaaatgtccct 11885151 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 2336070 tgcattcccaaatgtccct 2336052 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 1713225 tgcattcccaaatgtccct 1713243
>dbj|AB194415.1| Drosophila parabipectinata CG5835, CG11779, nos, CG5558 genes for hypothetical proteins, partial and complete cds Length = 17580 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 10844 ccgccgccgcctcctctcc 10862
>ref|NM_141104.1| Drosophila melanogaster CG14564-RA (CG14564), mRNA Length = 825 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 688 cctcctccgccgccgcctcctct 666
>gb|AC005414.2| Homo sapiens 12p13.3 PAC RPCI4-696F19 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 109370 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 ctcttctctgcattcccaa 31 ||||||||||||||||||| Sbjct: 44621 ctcttctctgcattcccaa 44603
>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence Length = 159969 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 ||||| ||||||||||||||||| Sbjct: 148467 ccctcctccgccgccgcctcctc 148489
>dbj|AK146514.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920019F16 product:SRY-box containing gene 11, full insert sequence Length = 2877 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 86 ccgccgccgcctcctctcc 104
>dbj|AK165693.1| Mus musculus 14 days embryo lung cDNA, RIKEN full-length enriched library, clone:G630001I15 product:SRY-box containing gene 11, full insert sequence Length = 2824 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 121 ccgccgccgcctcctctcc 139
>gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromosome y, complete sequence Length = 212330 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 51089 tgcattcccaaatgtccct 51071
>gb|AC159213.3| Pan troglodytes BAC clone CH251-624P14 from chromosome y, complete sequence Length = 192983 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 187761 tgcattcccaaatgtccct 187743
>dbj|AK165005.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130116M20 product:SRY-box containing gene 11, full insert sequence Length = 2829 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 127 ccgccgccgcctcctctcc 145
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 80170 cgtccgccgccgcctcctc 80152
>dbj|AK081871.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130083M11 product:unclassifiable, full insert sequence Length = 2074 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 gatctcttctctgcattcc 28 ||||||||||||||||||| Sbjct: 272 gatctcttctctgcattcc 290
>dbj|AK051032.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030057J08 product:Zic family member 2 (odd-paired homolog, Drosophila), full insert sequence Length = 2617 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 58 cctcctccgccgccgcctcctct 80
>tpg|BK001484.1| TPA: TPA_exp: Mus musculus SRY-box containing protein (Sox11) mRNA, complete cds Length = 7497 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 120 ccgccgccgcctcctctcc 138
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 22055818 ccctcgaccgccgccgcctcctc 22055840
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 22050604 cgtccgccgccgcctcctc 22050622 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 13351587 ccgccgccgcctcctctcc 13351569 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 9716257 ccctcgaccgccgccgcctcctc 9716279
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 23332350 ccgccgccgcctcctctcc 23332368 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 14013369 ccgccgccgcctcctctcc 14013387
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 28764670 ccgccgccgcctcctctcc 28764652 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 19746924 ccgccgccgcctcctctcc 19746942 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 6478718 ccgccgcctcctctccacc 6478700 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 2994813 ccgccgccgcctcctctcc 2994795
>gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromosome y, complete sequence Length = 176384 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 117322 tgcattcccaaatgtccct 117304
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 133768 ccgccgccgcctcctctcc 133750
>gb|AC007742.4|AC007742 Homo sapiens BAC clone RP11-357E16 from Y, complete sequence Length = 199174 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 36815 tgcattcccaaatgtccct 36833
>gb|AC007241.3|AC007241 Homo sapiens BAC clone RP11-157F24 from Y, complete sequence Length = 161868 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 4819 tgcattcccaaatgtccct 4801
>gb|AC055711.18| Homo sapiens 3 BAC RP11-67E18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154850 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 tctcttctctgcattccca 30 ||||||||||||||||||| Sbjct: 141134 tctcttctctgcattccca 141152
>gb|AC137719.5| Homo sapiens chromosome 8, clone RP11-260I22, complete sequence Length = 171164 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 51983 tgcattcccaaatgtccct 51965
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0693B08 Length = 140812 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 14252 ccgccgccgcctcctctcc 14234
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctc 60 ||||||||||||||||||| Sbjct: 37704 tccgccgccgcctcctctc 37686
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 116981 ccgccgcctcctctccacc 116999
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctccaccg 65 |||||||||| |||||||||||| Sbjct: 67215 ccgccgccgcatcctctccaccg 67193
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 14187 ccgccgccgcctcctctcc 14205
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 131701 ccgccgccgcctcctctcc 131719
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 3859153 cgtccgccgccgcctcctc 3859135
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 59981 ccgccgccgcctcctctcc 59963
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 82762 ccgccgccgcctcctctcc 82744
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 72445 ccgccgccgcctcctctcc 72427
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 13969 ccgccgccgcctcctctcc 13987
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 131380 ccgccgccgcctcctctcc 131398
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 165236 ccgccgccgcctcctctcc 165218
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 92668 cgtccgccgccgcctcctc 92686
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 145662 ccgccgcctcctctccacc 145644
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 69168 ccgccgccgcctcctctcc 69186
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 23763 ccgccgccgcctcctctcc 23781
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tccgccgccgcctcctctc 60 ||||||||||||||||||| Sbjct: 18980 tccgccgccgcctcctctc 18962
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 154811 ccgccgcctcctctccacc 154829
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 85438 ccgccgcctcctctccacc 85456
>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025E03 Length = 156806 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 22931 ccgccgccgcctcctctcc 22913
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 156354 ccctcgaccgccgccgcctcctc 156376
>dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0435E12 Length = 143188 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 113959 cgtccgccgccgcctcctc 113977
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 73645 ccgccgccgcctcctctcc 73627
>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048E12 Length = 152543 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 45260 ccgccgccgcctcctctcc 45278
>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full insert sequence Length = 2166 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 46 ccgccgcctcctctccaccgcag 68 |||||||||||||||| |||||| Sbjct: 173 ccgccgcctcctctccgccgcag 195
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 60990 ccgccgccgcctcctctcc 61008
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 553 cgtccgccgccgcctcctc 535
>dbj|AK103202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122C11, full insert sequence Length = 582 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 37 ccgccgccgcctcctctcc 19
>dbj|AK100000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N21, full insert sequence Length = 3666 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 214 ccgccgccgcctcctctcc 232
>dbj|AK073121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012A01, full insert sequence Length = 859 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 tccgccgccgcctcctctc 60 ||||||||||||||||||| Sbjct: 567 tccgccgccgcctcctctc 585
>dbj|AK072487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131J20, full insert sequence Length = 1418 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 701 cgtccgccgccgcctcctc 683
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 729441 tgcattcccaaatgtccct 729423 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 144380 tgcattcccaaatgtccct 144398
>gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chromosome y, complete sequence Length = 201209 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 163781 tgcattcccaaatgtccct 163799
>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence Length = 159766 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 80187 cctcctccgccgccgcctcctct 80165
>dbj|AK060319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F04, full insert sequence Length = 1648 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 70 ccctcgaccgccgccgcctcctc 92
>tpe|BN000213.1|SSC000213 TPA: TPA_inf: Sus scrofa mRNA for putative 6-16 protein (6-16 gene) Length = 586 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 ctcctctccaccgcaggtg 71 ||||||||||||||||||| Sbjct: 98 ctcctctccaccgcaggtg 80
>emb|CR760960.2| Xenopus tropicalis finished cDNA, clone TEgg019e05 Length = 1300 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 ccgccgcctcctctccacc 64 ||||||||||||||||||| Sbjct: 134 ccgccgcctcctctccacc 116
>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete sequence Length = 294272 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 177353 cctcctccgccgccgcctcctct 177331
>gb|AC159014.2| Pan troglodytes BAC clone CH251-852A24 from chromosome y, complete sequence Length = 203162 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tgcattcccaaatgtccct 39 ||||||||||||||||||| Sbjct: 184927 tgcattcccaaatgtccct 184909
>dbj|D70848.2|MUSZIC2P1 Mus musculus mRNA for Zic2 protein, complete cds Length = 2445 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 cctcgtccgccgccgcctcctct 59 |||| |||||||||||||||||| Sbjct: 5 cctcctccgccgccgcctcctct 27
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 cttctctgcattcccaaat 33 ||||||||||||||||||| Sbjct: 3790557 cttctctgcattcccaaat 3790539
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete sequence Length = 196552 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 155590 ccgccgccgcctcctctcc 155572
>dbj|AB046453.1| Nannochloris sp. SAG 251-2 gene for actin, partial cds Length = 714 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 cgtccgccgccgcctcctc 58 ||||||||||||||||||| Sbjct: 329 cgtccgccgccgcctcctc 347
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 21984163 ccctcgaccgccgccgcctcctc 21984185
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23, complete sequence Length = 115972 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcct 54 ||||||||||||||||||| Sbjct: 91691 ccctcgtccgccgccgcct 91709
>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69648 Score = 38.2 bits (19), Expect = 2.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcctcctc 58 |||||| |||||||||||||||| Sbjct: 26020 ccctcgaccgccgccgcctcctc 26042
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 146146 ccgccgccgcctcctctcc 146164
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13, complete sequence Length = 130249 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 ccctcgtccgccgccgcct 54 ||||||||||||||||||| Sbjct: 45784 ccctcgtccgccgccgcct 45802
>gb|BC078643.1| Mus musculus SRY-box containing gene 11, mRNA (cDNA clone MGC:78354 IMAGE:30144974), complete cds Length = 2022 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 117 ccgccgccgcctcctctcc 135
>gb|AF009414.1|AF009414 Mus musculus SOX11 (Sox11) mRNA, complete cds Length = 2896 Score = 38.2 bits (19), Expect = 2.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ccgccgccgcctcctctcc 61 ||||||||||||||||||| Sbjct: 104 ccgccgccgcctcctctcc 122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,108,476 Number of Sequences: 3902068 Number of extensions: 1108476 Number of successful extensions: 123988 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115685 Number of HSP's gapped (non-prelim): 8228 length of query: 72 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 51 effective length of database: 17,151,101,840 effective search space: 874706193840 effective search space used: 874706193840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
