| Clone Name | bast77h09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z98204.1|HVEXTEN Hordeum vulgare mRNA for putative extensin Length = 1352 Score = 533 bits (269), Expect = e-148 Identities = 272/273 (99%) Strand = Plus / Plus Query: 188 aagcacgagaagccacccaaggggcacaagccccctcaccaccaccaccacgccaagcca 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 aagcacgagaagccacccaaggggcacaagccccctcaccaccaccaccacgccaagcca 133 Query: 248 ccggtcggctcccacgcgccgcccacctacagccccccgacggctaagcctacccctccg 307 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ccggtcggctcccaagcgccgcccacctacagccccccgacggctaagcctacccctccg 193 Query: 308 gcccctaaacctgcaccacccacctacgcccccatcccgaagccgccgaagccatctcct 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gcccctaaacctgcaccacccacctacgcccccatcccgaagccgccgaagccatctcct 253 Query: 368 ccggcgtaccaccctacgcccaagcctgcacctcccacgtacaaaccaccaacccagcct 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 ccggcgtaccaccctacgcccaagcctgcacctcccacgtacaaaccaccaacccagcct 313 Query: 428 aagccctcgccgccggcgtacaagccagccccc 460 ||||||||||||||||||||||||||||||||| Sbjct: 314 aagccctcgccgccggcgtacaagccagccccc 346 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 433 ctcgccgccggcgtacaagccagc 456 |||||||||||||||||||||||| Sbjct: 517 ctcgccgccggcgtacaagccagc 540 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 433 ctcgccgccggcgtacaagccagccccc 460 ||||||||||||||||||||| |||||| Sbjct: 484 ctcgccgccggcgtacaagcctgccccc 511 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 ggcagcggctacggcggcggg 151 ||||||||||||||||||||| Sbjct: 17 ggcagcggctacggcggcggg 37 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 ccgccggcgtacaagccagccccc 460 ||||| |||||||||||||||||| Sbjct: 422 ccgcccgcgtacaagccagccccc 445 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 437 ccgccggcgtacaagccagccccc 460 ||||| |||||||||||||||||| Sbjct: 356 ccgcctgcgtacaagccagccccc 379
>ref|XM_472448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 184 gagaagccacccaaggagcacaagcc 209 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 1 atgggtggcaaggccgctctcctgatggccct 32
>gb|AY694819.1| Podocoryne carnea nanos 2 (nos2) mRNA, complete cds Length = 1002 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 acaagccccctcaccaccaccaccac 238 ||||||||| |||||||||||||||| Sbjct: 561 acaagccccttcaccaccaccaccac 586
>ref|XM_882648.1| PREDICTED: Bos taurus similar to Zinc finger protein 358, transcript variant 2 (LOC505837), mRNA Length = 2529 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 gaggcccaggccggcagcggctacggcggc 148 ||||||||||||||||||||| ||||||| Sbjct: 2041 gaggcccaggccggcagcggcagcggcggc 2012
>ref|XM_582193.2| PREDICTED: Bos taurus similar to Zinc finger protein 358, transcript variant 1 (LOC505837), mRNA Length = 2613 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 119 gaggcccaggccggcagcggctacggcggc 148 ||||||||||||||||||||| ||||||| Sbjct: 2125 gaggcccaggccggcagcggcagcggcggc 2096
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccacg 239 |||||||||||||||||||||| Sbjct: 24503 ccccctcaccaccaccaccacg 24482
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 216 agccccctcaccaccaccaccacgccaagc 245 ||||||| ||||||||||||||| |||||| Sbjct: 167006 agcccccccaccaccaccaccaccccaagc 167035
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence Length = 221930 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 gccccctcaccaccaccaccac 238 |||||||||||||||||||||| Sbjct: 142649 gccccctcaccaccaccaccac 142670
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 agccccctcaccaccaccaccacgccaagc 245 ||||||| ||||||||||||||| |||||| Sbjct: 147588 agcccccccaccaccaccaccaccccaagc 147559
>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete sequence Length = 160903 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 gccccctcaccaccaccaccac 238 |||||||||||||||||||||| Sbjct: 144608 gccccctcaccaccaccaccac 144629
>emb|X61280.1|OSHPRGP O.sativa gene for hydroxyproline-rich glycoprotein Length = 2647 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 1243 gagaagccacccaaggagcacaagcc 1268
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccaccacg 239 |||||||||||||||||||||| Sbjct: 143353 ccccctcaccaccaccaccacg 143374
>gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence Length = 215278 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 gccccctcaccaccaccaccac 238 |||||||||||||||||||||| Sbjct: 17659 gccccctcaccaccaccaccac 17680
>gb|AC150980.20| Medicago truncatula clone mth2-165j9, complete sequence Length = 119548 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 cctcaccaccaccaccacgcca 242 |||||||||||||||||||||| Sbjct: 111333 cctcaccaccaccaccacgcca 111354
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 20717188 gagaagccacccaaggagcacaagcc 20717213 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 20717005 atgggtggcaaggccgctctcctgatggccct 20717036
>ref|XM_310750.2| Anopheles gambiae str. PEST ENSANGP00000010164 (ENSANGG00000007675), partial mRNA Length = 2805 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 gccccctcaccaccaccaccac 238 |||||||||||||||||||||| Sbjct: 2645 gccccctcaccaccaccaccac 2624
>dbj|AK102919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114B14, full insert sequence Length = 1797 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 263 gagaagccacccaaggagcacaagcc 288 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 80 atgggtggcaaggccgctctcctgatggccct 111
>dbj|AK073912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H14, full insert sequence Length = 2655 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 265 gagaagccacccaaggagcacaagcc 290 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 82 atgggtggcaaggccgctctcctgatggccct 113
>dbj|AK064039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C11, full insert sequence Length = 1397 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 264 gagaagccacccaaggagcacaagcc 289 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 81 atgggtggcaaggccgctctcctgatggccct 112
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gagaagccacccaaggggcacaagcc 219 |||||||||||||||| ||||||||| Sbjct: 63339 gagaagccacccaaggagcacaagcc 63364 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 65 atgggtggcaaagccgccctcctggtggccct 96 ||||||||||| ||||| |||||| ||||||| Sbjct: 63156 atgggtggcaaggccgctctcctgatggccct 63187
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence Length = 153492 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 agccccctcaccaccaccaccacgccaagc 245 ||||||| ||||||||||||||| |||||| Sbjct: 82201 agcccccccaccaccaccaccaccccaagc 82172
>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete sequences Length = 190102 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 gcacaagccccctcaccaccaccacc 236 |||| ||||||||||||||||||||| Sbjct: 75982 gcaccagccccctcaccaccaccacc 76007
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 144683 ccccctcaccaccaccaccac 144663
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 358760 ccccctcaccaccaccaccac 358780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 158652 cccctcaccaccaccaccac 158671
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 159405 ccccctcaccaccaccaccac 159425
>gb|AC093349.6| Mus musculus chromosome 19, clone RP23-16C14, complete sequence Length = 227274 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 217525 ccccctcaccaccaccaccac 217505
>ref|XM_582073.2| PREDICTED: Bos taurus similar to mucolipin 1 (LOC505738), mRNA Length = 3083 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 agccccctcaccaccaccacc 236 ||||||||||||||||||||| Sbjct: 1558 agccccctcaccaccaccacc 1578
>gb|AC144945.4| Mus musculus BAC clone RP23-334D20 from chromosome 19, complete sequence Length = 233962 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 100147 ccccctcaccaccaccaccac 100127
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 892081 ccccctcaccaccaccaccac 892061
>gb|AC079405.4| Homo sapiens BAC clone RP11-1150H5 from 7, complete sequence Length = 58815 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 52932 ccccctcaccaccaccaccac 52912
>gb|AY273788.1| Leishmania major aromatic amino acid hydroxylase-like (AAAHL) gene, complete cds Length = 4981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 1892 ccccctcaccaccaccaccac 1912
>emb|Z71260.1|CEF15C11 Caenorhabditis elegans Cosmid F15C11, complete sequence Length = 24688 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccacg 239 ||||||||||||||||||||| Sbjct: 13620 cccctcaccaccaccaccacg 13640
>emb|CR376824.10| Zebrafish DNA sequence from clone DKEY-9P24 in linkage group 23, complete sequence Length = 235026 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 tcaccaccaccaccacgccaa 243 ||||||||||||||||||||| Sbjct: 169683 tcaccaccaccaccacgccaa 169663
>gb|AC145983.2| Pan troglodytes BAC clone RP43-17E6 from 7, complete sequence Length = 167523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 54747 ccccctcaccaccaccaccac 54767
>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a novel gene, complete sequence Length = 171251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 aagccccctcaccaccaccac 235 ||||||||||||||||||||| Sbjct: 92242 aagccccctcaccaccaccac 92222
>emb|AL953883.5| Human DNA sequence from clone RP11-246P17 on chromosome 9, complete sequence Length = 102894 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 aagccccctcaccaccaccac 235 ||||||||||||||||||||| Sbjct: 15265 aagccccctcaccaccaccac 15245
>emb|AL451043.14| Human DNA sequence from clone RP11-301M17 on chromosome 1 Contains two novel pseudogenes (MGC48637), the 3' end of a novel gene and four CpG islands, complete sequence Length = 52389 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 caagccccctcaccaccaccaccac 238 |||||||| |||||||||||||||| Sbjct: 44895 caagccccatcaccaccaccaccac 44919
>emb|AL354874.14| Human DNA sequence from clone RP11-38P6 on chromosome 9 Contains a novel gene, complete sequence Length = 88826 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccac 235 ||||||||||||||||||||| Sbjct: 9082 aagccccctcaccaccaccac 9102
>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3' end of novel protein similar to contactin associated protein-like 3 (CNTNAP3) and a pseudogene similar to part of vomeronasal 2 family, complete sequence Length = 208233 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccac 235 ||||||||||||||||||||| Sbjct: 171628 aagccccctcaccaccaccac 171648
>emb|AL049742.8|HSDJ565E6 Human DNA sequence from clone RP4-565E6 on chromosome 1 Contains a novel gene, a novel pseudogene, a profilin 1 (PFN1) pseudogene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 117434 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 caagccccctcaccaccaccaccac 238 |||||||| |||||||||||||||| Sbjct: 103557 caagccccatcaccaccaccaccac 103533
>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence Length = 174676 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 36211 ccccctcaccaccaccaccac 36191
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cggctcccacgcgccgcccac 273 ||||||||||||||||||||| Sbjct: 39263 cggctcccacgcgccgcccac 39243
>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete sequence Length = 82726 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 29895 ccccctcaccaccaccaccac 29875
>gb|AC137783.3| Homo sapiens chromosome 16 clone RP11-124P23, complete sequence Length = 198742 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 caagccccctcaccaccaccaccac 238 |||||||| |||||||||||||||| Sbjct: 93190 caagccccatcaccaccaccaccac 93166
>gb|AC136634.2| Homo sapiens chromosome 16 clone RP11-95C20, complete sequence Length = 176981 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 caagccccctcaccaccaccaccac 238 |||||||| |||||||||||||||| Sbjct: 165732 caagccccatcaccaccaccaccac 165708
>gb|AC104838.3| Homo sapiens chromosome 1 clone RP4-671I22, complete sequence Length = 143280 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 caagccccctcaccaccaccaccac 238 |||||||| |||||||||||||||| Sbjct: 82818 caagccccatcaccaccaccaccac 82842
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 gccgccctcctggtggccctc 97 ||||||||||||||||||||| Sbjct: 1510326 gccgccctcctggtggccctc 1510346
>gb|AC113245.12| Mus musculus chromosome 7, clone RP23-175D5, complete sequence Length = 213428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccac 238 ||||||||||||||||||||| Sbjct: 159603 ccccctcaccaccaccaccac 159583
>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccac 235 ||||||||||||||||||||| Sbjct: 73454 aagccccctcaccaccaccac 73474
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccaccac 238 ||||||| |||||||||||||||| Sbjct: 157170 aagccccttcaccaccaccaccac 157193
>gb|AC163684.5| Mus musculus BAC clone RP23-8N10 from chromosome 13, complete sequence Length = 234717 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccaccac 238 ||||||| |||||||||||||||| Sbjct: 95698 aagccccttcaccaccaccaccac 95721
>gb|AC161363.7| Mus musculus BAC clone RP24-554L15 from chromosome 6, complete sequence Length = 209193 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 119890 cccctcaccaccaccaccac 119909
>ref|XM_483597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 208 caccaccaccaccacgccaa 227
>ref|XM_507313.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1521_G02.20 mRNA Length = 1643 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 220 caccaccaccaccacgccaa 239
>ref|XM_477419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 843 ccaggccggcagcggctacg 862
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 341239 ccccctcaccaccaccacca 341258
>gb|AF165138.1| Homo sapiens PAC B39I12 derived from chromosome 21p11.2, complete sequence Length = 127999 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 9085 ccccctcaccaccaccacca 9066
>gb|AC128239.4| Rattus norvegicus 4 BAC CH230-514E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 187607 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 159887 cccctcaccaccaccaccac 159906
>gb|AC149683.2| Bos taurus BAC CH240-493H15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 176832 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 132659 cccctcaccaccaccaccac 132678
>ref|XM_428298.1| PREDICTED: Gallus gallus similar to immunoglobulin-like receptor CHIR-B4 precursor (LOC430747), partial mRNA Length = 944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 873 cccctcaccaccaccaccac 854
>ref|XM_368949.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00295.4) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 477 cccctcaccaccaccaccac 458
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 84452 ccaggccggcagcggctacg 84471
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 5956 ccccctcaccaccaccacca 5937
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 59984 cccctcaccaccaccaccac 60003
>ref|NM_011202.2| Mus musculus protein tyrosine phosphatase, non-receptor type 11 (Ptpn11), mRNA Length = 5557 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 3469 ctcccacgtacacaccaccaaccc 3446
>gb|AC090889.3| Canis familiaris clone RP81-156O18, complete sequence Length = 146276 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 95159 cccctcaccaccaccaccac 95178
>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence Length = 191050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 100526 cccctcaccaccaccaccac 100507
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 24389505 ccaggccggcagcggctacg 24389486
>gb|BC003980.1| Mus musculus protein tyrosine phosphatase, non-receptor type 11, mRNA (cDNA clone IMAGE:3490108), complete cds Length = 2552 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 464 ctcccacgtacacaccaccaaccc 441
>emb|AL021531.1|FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin and PAX6 genes Length = 45565 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 5964 ccccctcaccaccaccacca 5945
>ref|XM_852690.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 2 (LOC475637), mRNA Length = 8508 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 592 cccctcaccaccaccaccac 611
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence Length = 159693 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 15913 ctcccacgtacacaccaccaaccc 15890
>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence Length = 159785 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 18678 ccccctcaccaccaccacca 18697
>emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, complete sequence Length = 165027 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 66561 ccccctcaccaccaccacca 66542
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 212834 cccctcaccaccaccaccac 212815
>gb|AC121918.3| Mus musculus BAC clone RP24-195D23 from chromosome 2, complete sequence Length = 179270 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 45907 ccccctcaccaccaccacca 45926
>gb|AC122196.2| Mus musculus BAC clone RP23-50P5 from 5, complete sequence Length = 151406 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 17693 cccctcaccaccaccaccac 17674
>ref|NM_019318.1| Rattus norvegicus v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (Maf), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcaccaccaccaccacgcca 242 |||||||||||||||||||| Sbjct: 722 tcaccaccaccaccacgcca 741
>emb|AL163206.2|HS21C006 Homo sapiens chromosome 21 segment HS21C006 Length = 340000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 165107 ccccctcaccaccaccacca 165088
>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence Length = 206016 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 55177 cccctcaccaccaccaccac 55196
>emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on chromosome 1, complete sequence Length = 166258 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 acaagccccctcaccaccaccacc 236 |||||||||| ||||||||||||| Sbjct: 162270 acaagcccccccaccaccaccacc 162247
>ref|XM_501526.1| Yarrowia lipolytica CLIB122, YALI0C06644g predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 1201 ccaccaccaccacgccaagc 1182
>emb|AL359435.7| Human DNA sequence from clone RP11-530J24 on chromosome 1, complete sequence Length = 156947 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 58187 cccctcaccaccaccaccac 58206
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 722320 ccaccaccaccacgccaagc 722339
>emb|AL161436.12| Human DNA sequence from clone RP11-377N20 on chromosome 6 Contains part of a novel gene, complete sequence Length = 124814 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tcaccaccaccaccacgcca 242 |||||||||||||||||||| Sbjct: 12075 tcaccaccaccaccacgcca 12056 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tcaccaccaccaccacgcca 242 |||||||||||||||||||| Sbjct: 11979 tcaccaccaccaccacgcca 11960
>emb|AL137790.4| Human DNA sequence from clone RP5-1003J2 on chromosome 1p12-13.3 Contains 3' end of the gene LOC284462, the KCNC4 gene for a potassium voltage-gated channel from the Shaw-related subfamily member 4, the 3' end of a novel transcript and a CpG island, complete sequence Length = 127409 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 aagccccctcaccaccaccaccac 238 |||||||| ||||||||||||||| Sbjct: 92304 aagcccccgcaccaccaccaccac 92281
>gb|BC057398.1| Mus musculus protein tyrosine phosphatase, non-receptor type 11, mRNA (cDNA clone MGC:62275 IMAGE:6409640), complete cds Length = 5557 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 3469 ctcccacgtacacaccaccaaccc 3446
>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete sequence Length = 200566 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 117325 cccctcaccaccaccaccac 117344 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 64180 cccctcaccaccaccaccac 64161
>emb|CR318611.4| Zebrafish DNA sequence from clone DKEY-199F5 in linkage group 16, complete sequence Length = 162349 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 86498 caccaccaccaccacgccaa 86479
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 98062 ccccctcaccaccaccacca 98043
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 723519 ccaccaccaccacgccaagc 723538
>gb|AC109600.2| Homo sapiens chromosome 16 clone RP11-7O14, complete sequence Length = 142464 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccacgcc 241 |||||||||||||||| ||||||| Sbjct: 87126 ccccctcaccaccaccgccacgcc 87103
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 156145 cccctcaccaccaccaccac 156126
>gb|AC023823.7| Homo sapiens chromosome 16 clone RP11-163K4, complete sequence Length = 155180 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccaccacgcc 241 |||||||||||||||| ||||||| Sbjct: 49172 ccccctcaccaccaccgccacgcc 49149
>dbj|AK135991.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420444H06 product:protein tyrosine phosphatase, non-receptor type 11, full insert sequence Length = 2591 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 523 ctcccacgtacacaccaccaaccc 500
>dbj|AK147354.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1019E14 product:protein tyrosine phosphatase, non-receptor type 11, full insert sequence Length = 7443 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 5370 ctcccacgtacacaccaccaaccc 5347
>gb|AC017096.8| Homo sapiens BAC clone RP11-530J6 from 2, complete sequence Length = 132063 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agccccctcaccaccaccac 235 |||||||||||||||||||| Sbjct: 50963 agccccctcaccaccaccac 50982
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gccctcctggtggccctcctggtc 103 ||||||||||||||||||| |||| Sbjct: 1271930 gccctcctggtggccctccgggtc 1271907
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 ggccggcagcggctacggcggcgg 150 ||||||| |||||||||||||||| Sbjct: 5395806 ggccggcggcggctacggcggcgg 5395783
>emb|BX936427.7| Zebrafish DNA sequence from clone DKEY-48H11 in linkage group 7, complete sequence Length = 65674 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 58224 caccaccaccaccacgccaa 58243
>gb|AC121565.4| Mus musculus BAC clone RP23-223J11 from chromosome 6, complete sequence Length = 170000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 92238 cccctcaccaccaccaccac 92219
>gb|AC011712.6|AC011712 Homo sapiens chromosome 18, clone RP11-188I24, complete sequence Length = 145165 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 69315 ccccctcaccaccaccacca 69296
>gb|AF151075.1|AF151075 Homo sapiens HSPC241 mRNA, complete cds Length = 684 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caccacccacctacgcccccatcc 344 |||| ||||||||||||||||||| Sbjct: 25 caccgcccacctacgcccccatcc 2
>dbj|AK037691.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130038C11 product:unclassifiable, full insert sequence Length = 3488 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 aagccccctcaccaccaccaccac 238 |||||||||| ||||||||||||| Sbjct: 540 aagccccctccccaccaccaccac 563
>gb|AC091501.1|AC091501 Drosophila melanogaster, chromosome 2R, region 53D-53E, BAC clone BACR36P23, complete sequence Length = 198390 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 accacccacctacgccccca 341 |||||||||||||||||||| Sbjct: 115154 accacccacctacgccccca 115173
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcccacgcgccgcccacct 275 |||||||||||||||||||| Sbjct: 26484856 ctcccacgcgccgcccacct 26484837 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 26327249 ccaggccggcagcggctacg 26327230
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 17742942 ccccctcaccaccaccacca 17742923
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 27156578 caccaccaccaccacgccaa 27156597
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 10261397 ccaggccggcagcggctacg 10261416
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 24306974 ccaggccggcagcggctacg 24306955
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 37956072 cccctcaccaccaccaccac 37956053 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 32114123 caccaccaccaccacgccaa 32114104
>gb|AY935713.1| Spinacia oleracea gibberellin 2-oxidase 3 mRNA, complete cds Length = 1242 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 218 cccctcaccaccaccaccac 237
>gb|AC157528.2| Pan troglodytes BAC clone CH251-422M6 from chromosome unknown, complete sequence Length = 154857 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 129372 cccctcaccaccaccaccac 129391
>gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome 13, complete sequence Length = 144172 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctcctggtggccctcctggt 102 |||||||||||||||||||| Sbjct: 14297 ctcctggtggccctcctggt 14316
>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence Length = 203842 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 111126 cccctcaccaccaccaccac 111145
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 155937 caccaccaccaccacgccaa 155918
>gb|AC161620.5| Pan troglodytes BAC clone CH251-232H7 from chromosome unknown, complete sequence Length = 204271 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 89711 cccctcaccaccaccaccac 89730
>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete sequence Length = 181549 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 3225 cccctcaccaccaccaccac 3244
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 37016 cccctcaccaccaccaccac 36997
>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22 Length = 127365 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 120134 ccaggccggcagcggctacg 120153
>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1029H08 Length = 137050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 83316 ccaggccggcagcggctacg 83335
>dbj|BS000010.1| Pan troglodytes chromosome 22 clone:PTB-095F11, map 22, complete sequences Length = 177250 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 7241 ccccctcaccaccaccacca 7222
>dbj|BS000009.1| Pan troglodytes chromosome 22 clone:PTB-118J15, map 22, complete sequences Length = 199914 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 182683 ccccctcaccaccaccacca 182664
>emb|AL935306.6| Zebrafish DNA sequence from clone DKEY-65O9, complete sequence Length = 207183 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 177150 cccctcaccaccaccaccac 177131
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 57611 caccaccaccaccacgccaa 57630
>emb|X67151.1|HVBEPL H.vulgare bepl mRNA for ADP-glucose pyrophosphorylase Length = 2025 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 53 cccctcaccaccaccaccac 72
>gb|AF130247.2|AF130247 Homo sapiens clone 31B5 chromosome 21 map 21q11.2, complete sequence Length = 88869 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 60417 ccccctcaccaccaccacca 60398
>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full insert sequence Length = 2348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 251 cccctcaccaccaccaccac 232
>dbj|AK074001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074I09, full insert sequence Length = 1643 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 220 caccaccaccaccacgccaa 239
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ggcagcggctacggcggcgg 150 |||||||||||||||||||| Sbjct: 1643968 ggcagcggctacggcggcgg 1643949
>dbj|AK064378.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-D09, full insert sequence Length = 1631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 208 caccaccaccaccacgccaa 227
>gb|AF079325.1|AF079325 Homo sapiens nucleophosmin/nucleoplasmin3 (NPM3) gene, complete cds and FGF8 gene exon 1 Length = 8510 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 1878 cccctcaccaccaccaccac 1859
>gb|AC113178.10| Mus musculus chromosome 15, clone RP23-395K11, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 aagccccctcaccaccaccaccac 238 |||||||||| ||||||||||||| Sbjct: 64309 aagccccctccccaccaccaccac 64286
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 19234 ccaggccggcagcggctacg 19215
>gb|AE003806.3| Drosophila melanogaster chromosome 2R, section 44 of 73 of the complete sequence Length = 271179 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 accacccacctacgccccca 341 |||||||||||||||||||| Sbjct: 210698 accacccacctacgccccca 210717
>emb|AL929020.10| Mouse DNA sequence from clone RP23-291L24 on chromosome 2, complete sequence Length = 158398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 47689 ccccctcaccaccaccacca 47708
>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence Length = 174714 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 155963 cccctcaccaccaccaccac 155944
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cccaggccggcagcggctac 142 |||||||||||||||||||| Sbjct: 707939 cccaggccggcagcggctac 707958
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 116403 ccccctcaccaccaccacca 116422
>gb|AC130103.4| Rattus norvegicus BAC CH230-41L20 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224716 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tcaccaccaccaccacgccaagcc 246 ||||||||||||||| |||||||| Sbjct: 208282 tcaccaccaccaccaagccaagcc 208305
>gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, complete sequence Length = 177428 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ctcccacgtacaaaccaccaaccc 422 |||||||||||| ||||||||||| Sbjct: 72785 ctcccacgtacacaccaccaaccc 72808
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ccccctcaccaccaccacca 237 |||||||||||||||||||| Sbjct: 17752195 ccccctcaccaccaccacca 17752176
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcccacgcgccgcccacct 275 |||||||||||||||||||| Sbjct: 26413025 ctcccacgcgccgcccacct 26413006 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 26255418 ccaggccggcagcggctacg 26255399
>gb|AC004289.1|AC004289 Drosophila melanogaster DNA sequence (P1 DS03646 (D170)), complete sequence Length = 81625 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 accacccacctacgccccca 341 |||||||||||||||||||| Sbjct: 9639 accacccacctacgccccca 9658
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 91233 ccaggccggcagcggctacg 91214
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccaggccggcagcggctacg 143 |||||||||||||||||||| Sbjct: 41522 ccaggccggcagcggctacg 41503
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ctcccacgcgccgcccacct 275 |||||||||||||||||||| Sbjct: 57220 ctcccacgcgccgcccacct 57239
>emb|AL954724.9| Zebrafish DNA sequence from clone CH211-265P12, complete sequence Length = 136892 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 caccaccaccaccacgccaa 243 |||||||||||||||||||| Sbjct: 76817 caccaccaccaccacgccaa 76836
>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete sequence Length = 196737 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctcctggtggccctcctggt 102 |||||||||||||||||||| Sbjct: 24146 ctcctggtggccctcctggt 24165
>gb|AC002406.1|AC002406 Mouse chromosome X BAC B178A13 (Research Genetics mouse BAC library) complete sequence Length = 194985 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 190231 cccctcaccaccaccaccac 190212
>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence Length = 219234 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 136778 cccctcaccaccaccaccac 136797
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 891480 ccaccaccaccacgccaagc 891499
>gb|U56242.1|RNU56242 Rattus norvegicus transcription factor Maf2 mRNA, complete cds Length = 1944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tcaccaccaccaccacgcca 242 |||||||||||||||||||| Sbjct: 722 tcaccaccaccaccacgcca 741
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 2492 cccctcaccaccaccaccac 2511
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 131547 cccctcaccaccaccaccac 131528
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 574003 ccaccaccaccacgccaagc 574022
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 684438 ccaccaccaccacgccaagc 684457
>gb|M36066.1|ECOKDPDE E.coli transmembrane protein (kdpD) and cytoplasmic protein (kdpE) genes, complete cds Length = 3600 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ccaccaccaccacgccaagc 245 |||||||||||||||||||| Sbjct: 1458 ccaccaccaccacgccaagc 1439
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cccctcaccaccaccaccac 238 |||||||||||||||||||| Sbjct: 52348 cccctcaccaccaccaccac 52329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,906,590 Number of Sequences: 3902068 Number of extensions: 2906590 Number of successful extensions: 205899 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 203931 Number of HSP's gapped (non-prelim): 1968 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)