>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)|
          Length = 641

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 23/50 (46%), Positives = 26/50 (52%)
 Frame = +2

Query: 35  SHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVG 184
           SHA G+SA +S  +APP A    Q   QA P  GPP       P LRP G
Sbjct: 378 SHADGSSAASSQQQAPPQAVPPSQ--IQAPPMPGPPPLGPPPAPPLRPPG 425



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCL-RPVGTS 190
           PPP   P    G      P R PPPA           P   PP  P + RP L  P+G +
Sbjct: 470 PPPGPPPGLPPGPPPRGPPPRLPPPA-----------PPGIPPPRPGMMRPPLVPPLGPA 518

Query: 191 P 193
           P
Sbjct: 519 P 519

>PML_HUMAN (P29590) Probable transcription factor PML (Tripartite motif|
           protein 19) (RING finger protein 71)
          Length = 882

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
 Frame = +2

Query: 2   QRTTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCL-CQACPDSGP-----PCHPSLAR 163
           Q  T PP  TPS     S   SP    P +   FQ L CQ C          PC  +L  
Sbjct: 19  QEPTMPPPETPSEGRQPSPSPSPTERAPASEEEFQFLRCQQCQAEAKCPKLLPCLHTLCS 78

Query: 164 PCLRPVG 184
            CL   G
Sbjct: 79  GCLEASG 85

>PACC_ASPFU (Q4WY67) pH-response transcription factor pacC/RIM101|
          Length = 676

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +2

Query: 8   TTPPPVHTPSHAHGASAFASP-LRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVG 184
           +TPP   T + A   +A ++P     PP+  +  CL Q C +  P         C R VG
Sbjct: 48  STPPASVTATAAAATAAVSAPQANGTPPSDEQLSCLWQGCSEKCPSAEALYDHICERHVG 107

>PRIA_LENED (Q01200) Protein priA precursor|
          Length = 258

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 9/65 (13%)
 Frame = +2

Query: 11  TPPPVHTPSHAHGASAFASP----LRAPPPACSR-----FQCLCQACPDSGPPCHPSLAR 163
           T  P  TPS AH  S   SP       PPP CS         LC  C  S P    S  +
Sbjct: 98  TSTPTPTPSSAHHTSTHTSPSSTPTSTPPPQCSNGWDWISSLLC--CTPSSPSKPSSTPK 155

Query: 164 PCLRP 178
           P   P
Sbjct: 156 PSATP 160

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
 Frame = +2

Query: 14   PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQA--CPDSGPPCHPSLARPCLRPVG 184
            PPP + P    G      P RA  P C    C+C    CP S P C P     C +  G
Sbjct: 5398 PPPCNRP----GFVTVTRP-RAENPCCPETVCVCNTTTCPQSLPVCPPGQESICTQEEG 5451

>UNG_PHOLL (Q7N1U8) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 226

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 20  PVHTPSHAHGASAFASP-LRAPPPACSRFQCLCQACPDSGPPCHPSL 157
           P H P+ AHG S    P + APP   + ++ L    PD   P H  L
Sbjct: 65  PYHGPNQAHGLSFSVQPGIPAPPSLVNMYKELASDIPDFQHPNHGCL 111

>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.1)
           (Cav3.1c) (NBR13)
          Length = 2377

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
 Frame = +2

Query: 5   RTTPPPVHTPSHAHGASAFASPL-----RAPPPACSRFQCLCQACPDSGPPCHPSLARP 166
           R   PP  +PS A G +  +  +      +PPP   + + L +    SGPP   SL  P
Sbjct: 567 RCQAPPPRSPSEASGRTVGSGKVYPTVHTSPPPETLKEKALVEVAASSGPPTLTSLNIP 625

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +2

Query: 8   TTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRP 178
           +TPPP   P     A+A  +P   PPPA        Q  P    P  P +A P ++P
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPA------PLQIAPGVLHPAPPPIAPPLVQP 396

>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +2

Query: 8   TTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRP 178
           +TPPP   P     A+A  +P   PPPA        Q  P    P  P +A P ++P
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPA------PLQIAPGVLHPAPPPIAPPLVQP 396

>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCL-RPVGTS 190
           PPP   P    G      P R PPPA           P   PP  P + RP L  P+G +
Sbjct: 470 PPPGPPPGLPPGPPPRGPPPRLPPPA-----------PPGIPPPRPGMMRPPLVPPLGPA 518

Query: 191 P 193
           P
Sbjct: 519 P 519

>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding|
           protein SNP70) (Npw38-binding protein) (NpwBP)
          Length = 641

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCL-RPVGTS 190
           PPP   P    G      P R PPPA           P   PP  P + RP L  P+G +
Sbjct: 470 PPPGPPPGLPPGPPPRGPPPRLPPPA-----------PPGIPPPRPGMMRPPLVPPLGPA 518

Query: 191 P 193
           P
Sbjct: 519 P 519



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +2

Query: 35  SHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVG 184
           SH+ G S  +S  +APP +    Q   QA P  GPP       P LRP G
Sbjct: 378 SHSDGTSTASSQQQAPPQSVPPSQ--IQAPPMPGPPPLGPPPAPPLRPPG 425

>S23IP_HUMAN (Q9Y6Y8) SEC23-interacting protein (p125)|
          Length = 1000

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLR----PV 181
           P P + P      S+ A+P  APP          Q C   GPP HP  + P ++    P 
Sbjct: 176 PQPGYNPYRHTPGSSRANPYIAPPQL--------QQCQTPGPPAHPPPSGPPVQMYQMPP 227

Query: 182 GTSP 193
           G+ P
Sbjct: 228 GSLP 231

>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACS--RFQCLCQACPDSGPPCHP 151
           PPP   P+ +  AS    P R P  +CS  R  CLC      G  C P
Sbjct: 29  PPPGSPPAPSLRASLPLEPPRCPLRSCSLPRSACLCSRNSAPGSCCRP 76

>BBR1_SCHCO (P78741) Pheromone B beta 1 receptor|
          Length = 541

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRP 178
           PPP H P  AH + + A P R  PPA   +       P +  P  P   RP   P
Sbjct: 474 PPPTHMPDEAHISPSHAVPSR--PPAFPPYPFARDMRPAASEPMSP---RPITYP 523

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
           (ALL1-related protein)
          Length = 5262

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +2

Query: 5   RTTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVG 184
           R +PPP  +P          SP+ +PPP  SR   L      S PP    L+ P L P+G
Sbjct: 625 RLSPPPEDSPMSPPPEE---SPM-SPPPEVSRLSPLPVVSRLSPPPEESPLSPPALSPLG 680

>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1|
           B)
          Length = 153

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
 Frame = +2

Query: 14  PPPVH--TPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCL 172
           P P H   P   H  +      +AP P   +    C   P +  PCHP +  PCL
Sbjct: 70  PEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCH--PKAPEPCHPKVPEPCL 122

>V18K_MLVAB (P03400) 18 kDa protein|
          Length = 163

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 77  APPPACSRFQCLCQACPDSGPPCHPSLARPCL 172
           AP  A S   C C+     GP CH  +  P L
Sbjct: 61  APRSAWSALPCPCRTTSSDGPSCHQGMGAPVL 92

>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +2

Query: 5   RTTPPPVHTPSHAHGASAFASPL-----RAPPPACSRFQCLCQACPDSGPPCHPSLARP 166
           R   PP   PS A G +  +  +      +PPP   + + L +  P  GPP   S   P
Sbjct: 567 RCQAPPPRCPSEASGRTVGSGKVYPTVHTSPPPEILKDKALVEVAPSPGPPTLTSFNIP 625

>SOS2_HUMAN (Q07890) Son of sevenless homolog 2 (SOS-2)|
          Length = 1332

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +2

Query: 5    RTTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPP 142
            R  PPP   P       AF  PL +PPP   R        PD+ PP
Sbjct: 1178 RQPPPPKVKPRVPVPTGAFDGPLHSPPPPPPR-----DPLPDTPPP 1218

>PIGO_HUMAN (Q8TEQ8) Phosphatidylinositol-glycan biosynthesis, class O protein|
           (PIG-O)
          Length = 1089

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = +2

Query: 8   TTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVGT 187
           TT PP H         A+A  L      C+R   L   CP+  P CH S   P L P+ +
Sbjct: 610 TTNPPRHN-------GAYALRLGIGLLLCTRLAGLFHRCPEETPVCHSS---PWLSPLAS 659

>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)|
           (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2)
          Length = 223

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/55 (34%), Positives = 21/55 (38%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRP 178
           PPPVH P   H       P+  PPP C          P   P  HP    PC +P
Sbjct: 61  PPPVHLPPPVH----VPPPVHLPPPPC--HYPTQPPRPQPHPQPHPC---PCQQP 106

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/51 (35%), Positives = 19/51 (37%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARP 166
           PPP  +PS          P   PPPAC       Q  P   PP  P  A P
Sbjct: 99  PPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQ--PKPAPPPEPKPAPP 147

>PRGR_RAT (Q63449) Progesterone receptor (PR)|
          Length = 923

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 11/71 (15%)
 Frame = +2

Query: 14  PPPVHTPSHAHGASAFASPLRAPPPACSR---FQCLCQACPDSGP--------PCHPSLA 160
           P P   P    G +A A+P  A  P  S     +C+      + P        PC P  A
Sbjct: 420 PRPPRAPPSRPGEAAVAAPSAAVSPVSSSGSALECILYKAEGAPPTQGSFAPLPCKPPAA 479

Query: 161 RPCLRPVGTSP 193
             CL P  + P
Sbjct: 480 SSCLLPRDSLP 490

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
 Frame = +2

Query: 5   RTTPPPVHTPSHAHGASAFASPLR---APPPACSRFQCLCQACPDSGPPCHPSLARP 166
           R  PPP   P H+ G      P R   APPP  SR      A P   PP  P +  P
Sbjct: 284 RGGPPPPPPPPHSSGPP--PPPARGRGAPPPPPSRAP---TAAPPPPPPSRPGVGAP 335

>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +2

Query: 20  PVHTPSHAHGASA--FASPLRAPPPACSRFQCLCQACPDSGPPCHPSLAR 163
           P  TP  A  A     ASP RAPPP  S      +A P   PP   S  R
Sbjct: 34  PARTPPQASPARTPPQASPARAPPPQASP----ARASPARAPPSRSSSGR 79

>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)|
          Length = 2012

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 10   HPTSSSHPLTCPWRLRLCFPSPR 78
            HPT S+H LT  WRL    P+PR
Sbjct: 1756 HPTISAHTLTTDWRL----PTPR 1774

>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein|
          Length = 1259

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 17  PPVHTPSHAHGASAFASPLRAPPP 88
           P +  P+H+H  + FA P   PPP
Sbjct: 446 PTLQPPAHSHHPNMFAPPTALPPP 469

>URE1_PROMM (Q7V3V2) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 574

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 23  VHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVGT 187
           + TP   HG   FA+  +A  P+C  F  L QA  ++  P    L R C+  + T
Sbjct: 472 IPTPGPVHGRPMFAAFGKALAPSCLTF--LSQAAIETDLPNKLGLQRACIPVLNT 524

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 8    TTPPPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQACPDSGPPCHPSLARPCLRPVG 184
            +TPPP  TP  A      A   RA P A +R      +   +G P  P+ A P +R  G
Sbjct: 855  STPPPTPTPPSAPS----AGQTRAMPLAANR------STDAAGDPAEPTAALPIIRSDG 903

>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)|
          Length = 251

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
 Frame = +2

Query: 17  PPVHTPSHAHGASAFASPLRAPPPACSRFQCLCQ---ACPDSGPPCHPSLARPCLRPVGT 187
           P  H+P +  G     S  +       R  C  Q   AC D GPP  P    P   P G 
Sbjct: 30  PSDHSPGYYAGGQRRESSFQPEAGFGRRAACTVQRYAACRDPGPPPPPPPPPPPPPPPGL 89

Query: 188 SP 193
           SP
Sbjct: 90  SP 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,035,796
Number of Sequences: 219361
Number of extensions: 1075028
Number of successful extensions: 4589
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4542
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)