ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y875_SYNY3 (P73555) Hypothetical protein sll0875 43 4e-04
2KPRS3_ORYSA (Q8S2E5) Ribose-phosphate pyrophosphokinase 3 (EC 2.... 29 6.6

>Y875_SYNY3 (P73555) Hypothetical protein sll0875|
          Length = 258

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +2

Query: 368 YVLGTLTWRAFGPRGYLLVAAYFVVGTAVT 457
           +VLG + W A G RGYL+V AYF VG+AVT
Sbjct: 49  WVLGVIIWAALGWRGYLVVLAYFFVGSAVT 78



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>KPRS3_ORYSA (Q8S2E5) Ribose-phosphate pyrophosphokinase 3 (EC 2.7.6.1)|
           (Phosphoribosyl pyrophosphate synthetase 3)
          Length = 409

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 136 PAPGPSPDRCFAAPVPRPSA 195
           P+P PSP   FA P PR SA
Sbjct: 28  PSPSPSPASAFARPSPRASA 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.130    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,361,791
Number of Sequences: 219361
Number of extensions: 394741
Number of successful extensions: 1466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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