| Clone Name | bast77g03 |
|---|---|
| Clone Library Name | barley_pub |
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 78.2 bits (191), Expect = 9e-15 Identities = 34/41 (82%), Positives = 37/41 (90%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGSVS 452 W PATATWYG AEGDGS+GGACGYG+LVDV P KARVG+VS Sbjct: 40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVS 80
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 70.5 bits (171), Expect = 2e-12 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGSVS 452 W PA ATWYG GDGS GGACGYGTLVDV P+ ARVG+V+ Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 50.1 bits (118), Expect = 3e-06 Identities = 21/39 (53%), Positives = 24/39 (61%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446 W A TWYGD EG G+TGGACGYG V P + V + Sbjct: 34 WNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSA 72
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 45.8 bits (107), Expect = 5e-05 Identities = 20/42 (47%), Positives = 24/42 (57%) Frame = +3 Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446 D +W A +TWYG+ G GS GGACGYG V P V + Sbjct: 44 DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSA 85
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 44.7 bits (104), Expect = 1e-04 Identities = 20/36 (55%), Positives = 24/36 (66%) Frame = +3 Query: 339 ATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446 A TWYG+ G GSTGGACGYG+ V P+ A V + Sbjct: 36 AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSA 71
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 44.3 bits (103), Expect = 1e-04 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVD 416 WR A+AT+YGD G + GGACGYG + D Sbjct: 31 WRTASATFYGDDTGSATMGGACGYGNMYD 59
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = +3 Query: 327 EWRPATATWYGDAEGDGSTGGACGYGTLV 413 EWRPA AT+Y + GGACGYG LV Sbjct: 39 EWRPARATYYAATNPRDAVGGACGYGDLV 67
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/27 (62%), Positives = 19/27 (70%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 WR A AT+YGD G + GGACGYG L Sbjct: 37 WRYAHATFYGDETGGETMGGACGYGNL 63
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG+A+ G+ GGACGYG L Sbjct: 32 WINAHATFYGEADASGTMGGACGYGNL 58
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 39.7 bits (91), Expect = 0.004 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W+ A AT+YG ++ G+ GGACGYG L Sbjct: 36 WQNAHATFYGGSDASGTMGGACGYGNL 62
>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)| (AtEx17) (Ath-ExpAlpha-1.13) Length = 255 Score = 39.7 bits (91), Expect = 0.004 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410 V W A AT+YG ++ G+ GGACGYG L Sbjct: 24 VSAGWLQAHATFYGGSDASGTMGGACGYGNL 54
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 39.7 bits (91), Expect = 0.004 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG A+ G+ GGACGYG L Sbjct: 29 WVNARATFYGGADASGTMGGACGYGNL 55
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 39.7 bits (91), Expect = 0.004 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG ++ G+ GGACGYG L Sbjct: 31 WETAHATFYGGSDASGTMGGACGYGNL 57
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 39.7 bits (91), Expect = 0.004 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W+ A AT+YG ++ G+ GGACGYG L Sbjct: 31 WQNAHATFYGGSDASGTMGGACGYGNL 57
>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)| (Ath-ExpAlpha-1.3) Length = 248 Score = 39.7 bits (91), Expect = 0.004 Identities = 16/30 (53%), Positives = 20/30 (66%) Frame = +3 Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTL 410 D W A AT+YG ++ G+ GGACGYG L Sbjct: 22 DAGWVNAHATFYGGSDASGTMGGACGYGNL 51
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 39.3 bits (90), Expect = 0.005 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410 +D W A AT+YGD G + GACGYG L Sbjct: 48 LDTNWYDARATFYGDIHGGDTQQGACGYGNL 78
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 38.9 bits (89), Expect = 0.006 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W AT+YG A+ G+ GGACGYG L Sbjct: 32 WERGHATFYGGADASGTMGGACGYGNL 58
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 38.9 bits (89), Expect = 0.006 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W+ A AT+YG + G+ GGACGYG L Sbjct: 34 WQTAHATFYGGNDASGTMGGACGYGNL 60
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 38.5 bits (88), Expect = 0.008 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410 +D W A AT+YGD G + GACGYG L Sbjct: 54 LDPNWYDARATFYGDIHGGDTQQGACGYGNL 84
>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)| (AtEx25) (Ath-ExpAlpha-1.18) Length = 276 Score = 37.7 bits (86), Expect = 0.014 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410 +D W A AT+YGD G + GACGYG L Sbjct: 51 LDSSWYDARATFYGDIHGGETQQGACGYGDL 81
>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)| (Ath-ExpAlpha-1.17) Length = 269 Score = 37.7 bits (86), Expect = 0.014 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410 +D W A AT+YGD G + GACGYG L Sbjct: 44 LDSSWYDARATFYGDIHGGETQQGACGYGDL 74
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG + G+ GGACGYG L Sbjct: 27 WVNAHATFYGGGDASGTMGGACGYGNL 53
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG + G+ GGACGYG L Sbjct: 26 WINAHATFYGGGDASGTMGGACGYGNL 52
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W A AT+YG + G+ GGACGYG L Sbjct: 38 WINAHATFYGGGDASGTMGGACGYGNL 64
>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)| (Ath-ExpAlpha-1.11) Length = 253 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3 Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTL 410 D W+ AT+YG + G+ GGACGYG L Sbjct: 27 DGGWQGGHATFYGGEDASGTMGGACGYGNL 56
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 35.8 bits (81), Expect = 0.052 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +3 Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443 EW A +TWYG G G GGACGY VD P G Sbjct: 42 EWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTG 81
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 35.4 bits (80), Expect = 0.067 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +3 Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443 +W A +TWYG G G GGACGY VD P G Sbjct: 40 KWLDAKSTWYGKPTGAGPKDNGGACGYKN-VDKAPFNGMTG 79
>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)| (Ath-ExpAlpha-1.23) Length = 256 Score = 35.4 bits (80), Expect = 0.067 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 2/30 (6%) Frame = +3 Query: 327 EWRPATATWYGDAEGDGS--TGGACGYGTL 410 +W+ ATAT D +G S TGGACGYG L Sbjct: 27 DWKIATATLSRDRDGSSSVATGGACGYGDL 56
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 35.0 bits (79), Expect = 0.088 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +3 Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443 +W A +TWYG G G GGACGY VD P G Sbjct: 46 KWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKAPFNGMTG 85
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 35.0 bits (79), Expect = 0.088 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 318 VDVEWRPATATWYGDAEGDGST-GGACGYGTL 410 +D W A A +YGD G G+ GACGYG L Sbjct: 35 LDTAWYDARAAYYGDIHGGGTELEGACGYGDL 66
>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)| (Ath-ExpAlpha-1.14) Length = 252 Score = 34.7 bits (78), Expect = 0.11 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 345 ATWYGDAEGDGSTGGACGYGTL 410 AT+YG ++ G+ GGACGYG L Sbjct: 31 ATFYGGSDASGTMGGACGYGDL 52
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +3 Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443 +W A +TWYG G G GGACGY VD P G Sbjct: 40 KWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTG 79
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410 W AT+YGD G + GACGYG L Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDL 116
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 32.7 bits (73), Expect = 0.44 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +3 Query: 327 EWRPATATWYGDAEGDGS--TGGACG 398 +W A ATWYG G G+ GGACG Sbjct: 42 KWLTARATWYGQPNGAGAPDNGGACG 67
>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)| (Expansin S2) (Ath-ExpAlpha-1.24) Length = 252 Score = 31.2 bits (69), Expect = 1.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 330 WRPATATWYGDAEGDGSTGGACGY 401 W A AT+YG + S GGACGY Sbjct: 27 WIRAHATYYGVNDSPASLGGACGY 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,279,876 Number of Sequences: 219361 Number of extensions: 383577 Number of successful extensions: 1647 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1551 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1641 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)