ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP... 78 9e-15
2EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP... 70 2e-12
3EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5... 50 3e-06
4EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2... 46 5e-05
5EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4... 45 1e-04
6EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-... 44 1e-04
7EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-... 41 0.002
8EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX... 40 0.002
9EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX... 40 0.002
10EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX... 40 0.004
11EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXP... 40 0.004
12EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP... 40 0.004
13EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX... 40 0.004
14EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX... 40 0.004
15EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-... 40 0.004
16EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXP... 39 0.005
17EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX... 39 0.006
18EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-... 39 0.006
19EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXP... 39 0.008
20EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXP... 38 0.014
21EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-... 38 0.014
22EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX... 38 0.014
23EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-... 38 0.014
24EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX... 38 0.014
25EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX... 38 0.014
26MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Ho... 36 0.052
27MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I)... 35 0.067
28EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-... 35 0.067
29MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Ph... 35 0.088
30EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXP... 35 0.088
31EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-... 35 0.11
32MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I) 34 0.15
33EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-... 34 0.20
34EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen... 33 0.44
35EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-... 31 1.3

>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGSVS 452
           W PATATWYG AEGDGS+GGACGYG+LVDV P KARVG+VS
Sbjct: 40  WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVS 80



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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGSVS 452
           W PA ATWYG   GDGS GGACGYGTLVDV P+ ARVG+V+
Sbjct: 36  WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVN 76



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>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 21/39 (53%), Positives = 24/39 (61%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446
           W  A  TWYGD EG G+TGGACGYG  V   P +  V +
Sbjct: 34  WNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSA 72



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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +3

Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446
           D +W  A +TWYG+  G GS GGACGYG  V   P    V +
Sbjct: 44  DSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSA 85



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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 20/36 (55%), Positives = 24/36 (66%)
 Frame = +3

Query: 339 ATATWYGDAEGDGSTGGACGYGTLVDVVPMKARVGS 446
           A  TWYG+  G GSTGGACGYG+ V   P+ A V +
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSA 71



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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTLVD 416
           WR A+AT+YGD  G  + GGACGYG + D
Sbjct: 31  WRTASATFYGDDTGSATMGGACGYGNMYD 59



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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDGSTGGACGYGTLV 413
           EWRPA AT+Y       + GGACGYG LV
Sbjct: 39  EWRPARATYYAATNPRDAVGGACGYGDLV 67



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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           WR A AT+YGD  G  + GGACGYG L
Sbjct: 37  WRYAHATFYGDETGGETMGGACGYGNL 63



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>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG+A+  G+ GGACGYG L
Sbjct: 32  WINAHATFYGEADASGTMGGACGYGNL 58



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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W+ A AT+YG ++  G+ GGACGYG L
Sbjct: 36  WQNAHATFYGGSDASGTMGGACGYGNL 62



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>EXP17_ARATH (Q9ZSI1) Putative alpha-expansin 17 precursor (AtEXPA17) (At-EXP17)|
           (AtEx17) (Ath-ExpAlpha-1.13)
          Length = 255

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           V   W  A AT+YG ++  G+ GGACGYG L
Sbjct: 24  VSAGWLQAHATFYGGSDASGTMGGACGYGNL 54



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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG A+  G+ GGACGYG L
Sbjct: 29  WVNARATFYGGADASGTMGGACGYGNL 55



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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG ++  G+ GGACGYG L
Sbjct: 31  WETAHATFYGGSDASGTMGGACGYGNL 57



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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W+ A AT+YG ++  G+ GGACGYG L
Sbjct: 31  WQNAHATFYGGSDASGTMGGACGYGNL 57



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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           D  W  A AT+YG ++  G+ GGACGYG L
Sbjct: 22  DAGWVNAHATFYGGSDASGTMGGACGYGNL 51



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>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)|
           (AtEx22) (Ath-ExpAlpha-1.15)
          Length = 273

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           +D  W  A AT+YGD  G  +  GACGYG L
Sbjct: 48  LDTNWYDARATFYGDIHGGDTQQGACGYGNL 78



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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W    AT+YG A+  G+ GGACGYG L
Sbjct: 32  WERGHATFYGGADASGTMGGACGYGNL 58



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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W+ A AT+YG  +  G+ GGACGYG L
Sbjct: 34  WQTAHATFYGGNDASGTMGGACGYGNL 60



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>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)|
           (AtEx26) (Ath-ExpAlpha-1.16)
          Length = 279

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           +D  W  A AT+YGD  G  +  GACGYG L
Sbjct: 54  LDPNWYDARATFYGDIHGGDTQQGACGYGNL 84



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>EXP25_ARATH (Q9FL77) Putative alpha-expansin 25 precursor (AtEXPA25) (At-EXP25)|
           (AtEx25) (Ath-ExpAlpha-1.18)
          Length = 276

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           +D  W  A AT+YGD  G  +  GACGYG L
Sbjct: 51  LDSSWYDARATFYGDIHGGETQQGACGYGDL 81



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>EXP23_ARATH (Q9FL79) Alpha-expansin 23 precursor (AtEXPA23) (At-EXP23) (AtEx23)|
           (Ath-ExpAlpha-1.17)
          Length = 269

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           +D  W  A AT+YGD  G  +  GACGYG L
Sbjct: 44  LDSSWYDARATFYGDIHGGETQQGACGYGDL 74



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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG  +  G+ GGACGYG L
Sbjct: 27  WVNAHATFYGGGDASGTMGGACGYGNL 53



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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG  +  G+ GGACGYG L
Sbjct: 26  WINAHATFYGGGDASGTMGGACGYGNL 52



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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W  A AT+YG  +  G+ GGACGYG L
Sbjct: 38  WINAHATFYGGGDASGTMGGACGYGNL 64



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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 321 DVEWRPATATWYGDAEGDGSTGGACGYGTL 410
           D  W+   AT+YG  +  G+ GGACGYG L
Sbjct: 27  DGGWQGGHATFYGGEDASGTMGGACGYGNL 56



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>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l|
           1.0101 and 1.0102)
          Length = 265

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443
           EW  A +TWYG   G G    GGACGY   VD  P     G
Sbjct: 42  EWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTG 81



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>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443
           +W  A +TWYG   G G    GGACGY   VD  P     G
Sbjct: 40  KWLDAKSTWYGKPTGAGPKDNGGACGYKN-VDKAPFNGMTG 79



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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDGS--TGGACGYGTL 410
           +W+ ATAT   D +G  S  TGGACGYG L
Sbjct: 27  DWKIATATLSRDRDGSSSVATGGACGYGDL 56



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>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)|
          Length = 269

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443
           +W  A +TWYG   G G    GGACGY   VD  P     G
Sbjct: 46  KWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKAPFNGMTG 85



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>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)|
           (AtEx21) (Ath-ExpAlpha-1.20)
          Length = 256

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 318 VDVEWRPATATWYGDAEGDGST-GGACGYGTL 410
           +D  W  A A +YGD  G G+   GACGYG L
Sbjct: 35  LDTAWYDARAAYYGDIHGGGTELEGACGYGDL 66



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>EXP11_ARATH (Q9LNU3) Alpha-expansin 11 precursor (AtEXPA11) (At-EXP11) (AtEx11)|
           (Ath-ExpAlpha-1.14)
          Length = 252

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 ATWYGDAEGDGSTGGACGYGTL 410
           AT+YG ++  G+ GGACGYG L
Sbjct: 31  ATFYGGSDASGTMGGACGYGDL 52



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>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)|
          Length = 263

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDG--STGGACGYGTLVDVVPMKARVG 443
           +W  A +TWYG   G G    GGACGY   VD  P     G
Sbjct: 40  KWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTG 79



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>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)|
           (Ath-ExpAlpha-1.19)
          Length = 312

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGYGTL 410
           W    AT+YGD  G  +  GACGYG L
Sbjct: 90  WGHGRATFYGDINGGETQQGACGYGDL 116



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>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 327 EWRPATATWYGDAEGDGS--TGGACG 398
           +W  A ATWYG   G G+   GGACG
Sbjct: 42  KWLTARATWYGQPNGAGAPDNGGACG 67



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>EXP12_ARATH (Q9LDJ3) Alpha-expansin 12 precursor (AtEXPA12) (At-EXP12) (AtEx12)|
           (Expansin S2) (Ath-ExpAlpha-1.24)
          Length = 252

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 330 WRPATATWYGDAEGDGSTGGACGY 401
           W  A AT+YG  +   S GGACGY
Sbjct: 27  WIRAHATYYGVNDSPASLGGACGY 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,279,876
Number of Sequences: 219361
Number of extensions: 383577
Number of successful extensions: 1647
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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