ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77g03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 198 bits (100), Expect = 1e-47 Identities = 133/144 (92%) Strand = Plus / Plus Query: 311 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 370 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 123 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 182 Query: 371 cgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtggtgccgatgaa 430 ||||||||||||||| || ||||| ||||| || ||||||||||||||||||||||||| Sbjct: 183 cgacggcagcaccggcggggcgtgtgggtatggatcgctggtggacgtggtgccgatgaa 242 Query: 431 ggcgagggtggggtcggtgagccc 454 |||| ||||||||||||||||||| Sbjct: 243 ggcgcgggtggggtcggtgagccc 266 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 245 ctccgccgcgttcttgctcgacggcgggaagtc 277 ||||||| |||||||| |||||||||||||||| Sbjct: 72 ctccgcctcgttcttgttcgacggcgggaagtc 104
>gb|AF391110.1| Oryza sativa beta-expansin OsEXPB17 (EXPB17) gene, partial cds Length = 4529 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 311 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 370 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 2241 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 2300 Query: 371 cgacggcagcaccgg 385 ||||||||||||||| Sbjct: 2301 cgacggcagcaccgg 2315 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 406 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagccc 454 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3526 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagccc 3574 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 245 ctccgccgcgttcttgctcgacggcgggaagtc 277 ||||||| |||||||| |||||||||||||||| Sbjct: 2190 ctccgcctcgttcttgttcgacggcgggaagtc 2222
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 311 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 370 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 27998 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 28057 Query: 371 cgacggcagcaccgg 385 ||||||||||||||| Sbjct: 28058 cgacggcagcaccgg 28072 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 406 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagccc 454 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 29283 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagccc 29331 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 245 ctccgccgcgttcttgctcgacggcgggaagtc 277 ||||||| |||||||| |||||||||||||||| Sbjct: 27947 ctccgcctcgttcttgttcgacggcgggaagtc 27979
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 311 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 370 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 26491111 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 26491170 Query: 371 cgacggcagcaccgg 385 ||||||||||||||| Sbjct: 26491171 cgacggcagcaccgg 26491185 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 406 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagccc 454 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 26492396 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagccc 26492444 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 245 ctccgccgcgttcttgctcgacggcgggaagtc 277 ||||||| |||||||| |||||||||||||||| Sbjct: 26491060 ctccgcctcgttcttgttcgacggcgggaagtc 26491092
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Plus Query: 311 ggcggctgtcgacgtggagtggcggccggccaccgcgacgtggtacggcgacgccgaggg 370 |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 131751 ggcggcggtcgacatggagtggcggccggcgaccgcgacgtggtacggcgacgccgaagg 131810 Query: 371 cgacggcagcaccgg 385 ||||||||||||||| Sbjct: 131811 cgacggcagcaccgg 131825 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 406 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagccc 454 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133036 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagccc 133084 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 245 ctccgccgcgttcttgctcgacggcgggaagtc 277 ||||||| |||||||| |||||||||||||||| Sbjct: 131700 ctccgcctcgttcttgttcgacggcgggaagtc 131732
>ref|XM_466967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 105 bits (53), Expect = 1e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 326 ggagtggcggccggccaccgcgacgtggtacggcgacgccgagggcgacggcagcaccgg 385 |||||||| |||||||| || || ||||||||| ||| || |||||||||||| ||| Sbjct: 129 ggagtggcacccggccacggccacctggtacggcagcgctgacggcgacggcagcgacgg 188 Query: 386 gggagcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtc 445 || ||||| || ||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 189 cggcgcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgc 248 Query: 446 ggtgagccc 454 ||||||||| Sbjct: 249 ggtgagccc 257
>dbj|AK107184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H07, full insert sequence Length = 1414 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 406 cgctggtggacgtggtgccgatgaaggcgagggtggggtcggtgagccc 454 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 201 cgctggtggacgtggtgccgatgaaggcgcgggtggggtcggtgagccc 249
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 390 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 449 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 25672495 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 25672554 Query: 450 agccc 454 ||||| Sbjct: 25672555 agccc 25672559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 2486632 ccctctcgcgccgccgccgcc 2486652 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgcc 203 |||||||||||||||||||| Sbjct: 1655430 ctccctctcgcgccgccgcc 1655411
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 390 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 449 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 142542 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 142601 Query: 450 agccc 454 ||||| Sbjct: 142602 agccc 142606
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 390 gcgtgcgggtacgggacgctggtggacgtggtgccgatgaaggcgagggtggggtcggtg 449 ||||| || ||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct: 75171 gcgtgtggatacgggacgctggtggacgtggtgccgatgaagacgcgggtgggcgcggtg 75230 Query: 450 agccc 454 ||||| Sbjct: 75231 agccc 75235
>dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1909 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 250 ccgcgttcttgctcgacggcggga 273 |||||||||||||||||||||||| Sbjct: 241 ccgcgttcttgctcgacggcggga 264
>gb|AC104631.2| Drosophila melanogaster clone BACR35D19, complete sequence Length = 166908 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 caaggccaagggcaacggcaagg 312 ||||||||||||||||||||||| Sbjct: 88072 caaggccaagggcaacggcaagg 88050
>ref|NM_134588.1| Drosophila melanogaster CG1503-RA (CG1503), mRNA Length = 1235 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 caaggccaagggcaacggcaagg 312 ||||||||||||||||||||||| Sbjct: 353 caaggccaagggcaacggcaagg 375
>gb|BT004894.1| Drosophila melanogaster LD44327 full insert cDNA Length = 1214 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 caaggccaagggcaacggcaagg 312 ||||||||||||||||||||||| Sbjct: 314 caaggccaagggcaacggcaagg 336
>gb|AE003569.4| Drosophila melanogaster chromosome X, section 70 of 74 of the complete sequence Length = 283558 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 caaggccaagggcaacggcaagg 312 ||||||||||||||||||||||| Sbjct: 184304 caaggccaagggcaacggcaagg 184282
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 285 aagggcaaggccaagggcaacggcaa 310 |||||||||| ||||||||||||||| Sbjct: 2801749 aagggcaagggcaagggcaacggcaa 2801724
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccgc 205 |||||||||||||||||||||| Sbjct: 1020381 ctccctctcgcgccgccgccgc 1020360
>dbj|AB183715.1| Leymus chinensis LcBADH1 mRNA for betaine aldehyde dehydrogenase, partial cds Length = 2108 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 gcgttcttgctcgacggcggga 273 |||||||||||||||||||||| Sbjct: 163 gcgttcttgctcgacggcggga 184
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 187 cctctcgcgccgccgccgcccccttggcgc 216 |||| ||||||||||||||| ||||||||| Sbjct: 1282779 cctcgcgcgccgccgccgccaccttggcgc 1282808
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccgc 205 |||||||||||||||||||||| Sbjct: 110778 ctccctctcgcgccgccgccgc 110757
>ref|NM_127640.1| Arabidopsis thaliana ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) AT2G20750 (ATEXPB1) mRNA, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 gccgagggcgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtg 419 |||||||| |||||||||| ||| ||||| || || ||||| || ||||||||||| Sbjct: 215 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtg 271
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 2181 gctctgctgcattctgctgct 2161
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 1532 gctctgctgcattctgctgct 1512
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 946 gctctgctgcattctgctgct 966
>ref|NM_013435.1| Homo sapiens retina and anterior neural fold homeobox (RAX), mRNA Length = 1775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 cctctcgcgccgccgccgccc 207 ||||||||||||||||||||| Sbjct: 1073 cctctcgcgccgccgccgccc 1093
>gb|AC141886.3| Mus musculus BAC clone RP24-87G24 from chromosome 7, complete sequence Length = 173677 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 gaagggcaaggccaagggcaacggcaagg 312 ||||||||||| ||||||||| ||||||| Sbjct: 20965 gaagggcaagggcaagggcaagggcaagg 20993
>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 284 gaagggcaaggccaagggcaacggcaagg 312 ||||||||||| ||||||||| ||||||| Sbjct: 148554 gaagggcaagggcaagggcaagggcaagg 148526
>emb|AJ566331.1|FSY566331 Ficus sycomorus microsatellite DNA, clone FIGT06C09 Length = 275 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 gaagggcaaggccaagggcaacggcaagg 312 ||||||||||| ||||||||| ||||||| Sbjct: 137 gaagggcaagggcaagggcaagggcaagg 165
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 gaagggcaaggccaagggcaacggcaagg 312 ||||||||||| ||||||||| ||||||| Sbjct: 193408 gaagggcaagggcaagggcaagggcaagg 193436
>gb|BC051901.1| Homo sapiens retina and anterior neural fold homeobox, mRNA (cDNA clone IMAGE:6139916), complete cds Length = 2947 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 cctctcgcgccgccgccgccc 207 ||||||||||||||||||||| Sbjct: 808 cctctcgcgccgccgccgccc 828
>ref|NM_001029870.1| Homo sapiens similar to RIKEN cDNA 5730467H21 (LOC345079), mRNA Length = 2921 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ggctccctctcgcgccgccgccgcc 206 |||||| |||||||||||||||||| Sbjct: 386 ggctccttctcgcgccgccgccgcc 362
>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence Length = 187669 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 cgcgccgccgccgcccccttggcgc 216 |||||||| |||||||||||||||| Sbjct: 150408 cgcgccgcagccgcccccttggcgc 150432
>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence Length = 195609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 cctctcgcgccgccgccgccc 207 ||||||||||||||||||||| Sbjct: 134959 cctctcgcgccgccgccgccc 134939
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 ctccctctcgcgccgccgccgcccc 208 |||||||||||||||||| |||||| Sbjct: 25436915 ctccctctcgcgccgccgtcgcccc 25436939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 21571413 gctctgctgcattctgctgct 21571433
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccg 204 ||||||||||||||||||||| Sbjct: 17947035 ctccctctcgcgccgccgccg 17947015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 4717979 ccctctcgcgccgccgccgcc 4717999 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gctccctctcgcgccgccgccgcc 206 ||||| |||||||||||||||||| Sbjct: 17391468 gctccttctcgcgccgccgccgcc 17391445
>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence Length = 176662 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ggctccctctcgcgccgccgccgcc 206 |||||| |||||||||||||||||| Sbjct: 49222 ggctccttctcgcgccgccgccgcc 49246
>gb|BT005024.1| Arabidopsis thaliana clone U20717 putative beta-expansin pollen allergen protein (At2g20750) mRNA, complete cds Length = 847 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 gccgagggcgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtg 419 |||||||| |||||||||| ||| ||||| || || ||||| || ||||||||||| Sbjct: 151 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtg 207
>gb|AC107308.7| Homo sapiens 12 BAC RP11-677M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 98485 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 cgcgccgccgccgcccccttggcgc 216 |||||||| |||||||||||||||| Sbjct: 69635 cgcgccgcagccgcccccttggcgc 69659
>gb|BT003932.1| Arabidopsis thaliana clone RAFL15-12-F16 (R20717) putative beta-expansin pollen allergen protein (At2g20750) mRNA, complete cds Length = 1124 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 gccgagggcgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtg 419 |||||||| |||||||||| ||| ||||| || || ||||| || ||||||||||| Sbjct: 213 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtg 269
>gb|AY084478.1| Arabidopsis thaliana clone 109135 mRNA, complete sequence Length = 1137 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 gccgagggcgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtg 419 |||||||| |||||||||| ||| ||||| || || ||||| || ||||||||||| Sbjct: 215 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtg 271
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccg 204 ||||||||||||||||||||| Sbjct: 13341 ctccctctcgcgccgccgccg 13321
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccg 204 ||||||||||||||||||||| Sbjct: 152224 ctccctctcgcgccgccgccg 152204
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 80578 ccctctcgcgccgccgccgcc 80598
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 102553 ccctctcgcgccgccgccgcc 102573
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 ctccctctcgcgccgccgccgcccc 208 |||||||||||||||||| |||||| Sbjct: 68231 ctccctctcgcgccgccgtcgcccc 68255
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 31587 gctctgctgcattctgctgct 31607
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 1532 gctctgctgcattctgctgct 1512
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 2181 gctctgctgcattctgctgct 2161
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full insert sequence Length = 1432 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gctctgctgcattctgctgct 235 ||||||||||||||||||||| Sbjct: 947 gctctgctgcattctgctgct 967
>gb|AF115392.1|AF115392 Homo sapiens retinal homeobox protein RX mRNA, complete cds Length = 1775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 cctctcgcgccgccgccgccc 207 ||||||||||||||||||||| Sbjct: 1073 cctctcgcgccgccgccgccc 1093
>emb|AJ323733.1|HSA323733 Homo sapiens genomic sequence surrounding NotI site, clone NB6-170C Length = 946 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 cgcgccgccgccgcccccttggcgc 216 |||||||| |||||||||||||||| Sbjct: 132 cgcgccgcagccgcccccttggcgc 108
>emb|AJ328162.1|HSA328162 Homo sapiens genomic sequence surrounding NotI site, clone NL6-IN16R Length = 602 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 cgcgccgccgccgcccccttggcgc 216 |||||||| |||||||||||||||| Sbjct: 132 cgcgccgcagccgcccccttggcgc 108
>dbj|AK072143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F03, full insert sequence Length = 3267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 ctccctctcgcgccgccgccg 204 ||||||||||||||||||||| Sbjct: 119 ctccctctcgcgccgccgccg 139
>dbj|AK064385.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E07, full insert sequence Length = 2120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 145 ccctctcgcgccgccgccgcc 165
>dbj|AK060106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C04, full insert sequence Length = 941 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccctctcgcgccgccgccgcc 206 ||||||||||||||||||||| Sbjct: 170 ccctctcgcgccgccgccgcc 190
>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 204230 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 284 gaagggcaaggccaagggcaacggcaagg 312 ||||||||||| ||||||||| ||||||| Sbjct: 194714 gaagggcaagggcaagggcaagggcaagg 194742
>gb|U95967.1|ATU95967 Arabidopsis thaliana beta-expansin mRNA, partial cds Length = 1037 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 gccgagggcgacggcagcaccgggggagcgtgcgggtacgggacgctggtggacgtg 419 |||||||| |||||||||| ||| ||||| || || ||||| || ||||||||||| Sbjct: 117 gccgagggagacggcagcagcggaggagcttgtggttacggatcgttggtggacgtg 173
>gb|L41044.1|HUMHMGIC01 Homo sapiens high-mobility group phosphoprotein (HMGI-C) gene, exons 1-3, complete cds Length = 16727 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 cgcgccgccgccgcccccttggcgc 216 |||||||| |||||||||||||||| Sbjct: 3537 cgcgccgcagccgcccccttggcgc 3561
>ref|NM_127432.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA binding / helicase/ nucleic acid binding AT2G18760 mRNA, complete cds Length = 3564 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 caagcccaacgccaatggct 185 |||||||||||||||||||| Sbjct: 3298 caagcccaacgccaatggct 3279
>ref|NM_193223.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3864 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctctcgcgccgccgccgcc 206 |||||||||||||||||||| Sbjct: 25 cctctcgcgccgccgccgcc 6
>gb|AC004036.1| Homo sapiens chromosome 16, cosmid clone 400D1 (LANL), complete sequence Length = 40179 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 cccctctgaccaccggggcctggg 68 ||||||||||||| |||||||||| Sbjct: 24143 cccctctgaccacgggggcctggg 24120
>gb|AC102714.16| Mus musculus chromosome 5, clone RP24-298D13, complete sequence Length = 165774 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ctcgcgccgccgccgccccc 209 |||||||||||||||||||| Sbjct: 111486 ctcgcgccgccgccgccccc 111505
>ref|XM_882545.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 17 (CACNA1G), mRNA Length = 7849 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6538 ggagtggccccaaaaggaggaggc 6515
>ref|XM_882541.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 16 (CACNA1G), mRNA Length = 7864 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6553 ggagtggccccaaaaggaggaggc 6530
>ref|XM_882533.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 15 (CACNA1G), mRNA Length = 7795 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6484 ggagtggccccaaaaggaggaggc 6461
>ref|XM_882528.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 14 (CACNA1G), mRNA Length = 7918 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6607 ggagtggccccaaaaggaggaggc 6584
>ref|XM_882520.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 13 (CACNA1G), mRNA Length = 7885 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6574 ggagtggccccaaaaggaggaggc 6551
>ref|XM_586243.2| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 1 (CACNA1G), mRNA Length = 7984 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6673 ggagtggccccaaaaggaggaggc 6650
>ref|XM_882504.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 12 (CACNA1G), mRNA Length = 7434 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6123 ggagtggccccaaaaggaggaggc 6100
>ref|XM_869265.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 2 (CACNA1G), mRNA Length = 8197 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6886 ggagtggccccaaaaggaggaggc 6863
>ref|XM_882489.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 11 (CACNA1G), mRNA Length = 8128 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6817 ggagtggccccaaaaggaggaggc 6794
>ref|XM_882483.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 10 (CACNA1G), mRNA Length = 8095 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6784 ggagtggccccaaaaggaggaggc 6761
>ref|XM_882474.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 9 (CACNA1G), mRNA Length = 7575 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6264 ggagtggccccaaaaggaggaggc 6241
>ref|XM_882466.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 8 (CACNA1G), mRNA Length = 7960 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6649 ggagtggccccaaaaggaggaggc 6626
>ref|XM_882458.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 7 (CACNA1G), mRNA Length = 8062 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6751 ggagtggccccaaaaggaggaggc 6728
>ref|XM_882453.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 6 (CACNA1G), mRNA Length = 8029 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6718 ggagtggccccaaaaggaggaggc 6695
>ref|XM_882423.1| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1G subunit, transcript variant 3 (CACNA1G), mRNA Length = 7816 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ggagaggccccaaaaggaggaggc 116 |||| ||||||||||||||||||| Sbjct: 6505 ggagtggccccaaaaggaggaggc 6482
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgaagggcaaggccaagggc 302 |||||||||||||||||||| Sbjct: 5528800 cgaagggcaaggccaagggc 5528819
>gb|AY188952.1| Hordeum brevisubulatum betaine aldehyde dehydrogenase (BADH) mRNA, complete cds Length = 1776 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gttcttgctcgacggcggga 273 |||||||||||||||||||| Sbjct: 259 gttcttgctcgacggcggga 278
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggaagtcggcggcgaagggc 290 |||||||||||||||||||| Sbjct: 82434 ggaagtcggcggcgaagggc 82415
>gb|AC092117.4| Homo sapiens chromosome 16 clone CTD-2270P14, complete sequence Length = 211606 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cccctctgaccaccggggcctggg 68 ||||||||||||| |||||||||| Sbjct: 102439 cccctctgaccacgggggcctggg 102462
>ref|NM_013021.1| Rattus norvegicus retinal degeneration, slow (Rds), mRNA Length = 1562 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 tggcgctctgctgcattctgctgc 234 |||||||||||||| ||||||||| Sbjct: 466 tggcgctctgctgctttctgctgc 489
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 gcgccgccgccgcccccttggcgc 216 ||||||||||||||||||| |||| Sbjct: 20554 gcgccgccgccgcccccttagcgc 20577
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cgtggtacggcgacgccgag 368 |||||||||||||||||||| Sbjct: 348808 cgtggtacggcgacgccgag 348827
>emb|AJ633545.1| Myxococcus xanthus groEL gene for chaperonin GroEL Length = 1644 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgaagggcaaggccaagggc 302 |||||||||||||||||||| Sbjct: 1571 cgaagggcaaggccaagggc 1590
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 406 cgctggtggacgtggtgccgatga 429 ||||| |||||||||||||||||| Sbjct: 2339176 cgctgctggacgtggtgccgatga 2339153
>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence Length = 149252 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaagggcaaggccaagggca 303 |||||||||||||||||||| Sbjct: 7047 gaagggcaaggccaagggca 7028
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 caagcccaacgccaatggct 185 |||||||||||||||||||| Sbjct: 53109 caagcccaacgccaatggct 53090
>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete sequence Length = 230839 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ccataaaagagagggagagg 99 |||||||||||||||||||| Sbjct: 145992 ccataaaagagagggagagg 145973
>gb|AC158782.5| Mus musculus chromosome 5, clone RP23-134H19, complete sequence Length = 228458 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ctcgcgccgccgccgccccc 209 |||||||||||||||||||| Sbjct: 210626 ctcgcgccgccgccgccccc 210645
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 gcgccgccgccgcccccttggcgc 216 ||||||||||||||||||| |||| Sbjct: 18659276 gcgccgccgccgcccccttagcgc 18659299
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccgccc 207 ||||||||| |||||||||||||| Sbjct: 22855524 ctccctctctcgccgccgccgccc 22855501 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctctcgcgccgccgccgcc 206 |||||||||||||||||||| Sbjct: 19347166 cctctcgcgccgccgccgcc 19347147
>gb|AC093517.3| Homo sapiens chromosome 16 clone CTD-2593F12, complete sequence Length = 160606 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cccctctgaccaccggggcctggg 68 ||||||||||||| |||||||||| Sbjct: 95859 cccctctgaccacgggggcctggg 95882
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgccgccc 207 ||||||||| |||||||||||||| Sbjct: 59081 ctccctctctcgccgccgccgccc 59058
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctctcgcgccgccgccgcc 206 |||||||||||||||||||| Sbjct: 75171 cctctcgcgccgccgccgcc 75152
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 ctccctctcgcgccgccgcc 203 |||||||||||||||||||| Sbjct: 92533 ctccctctcgcgccgccgcc 92514
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gctccctctcgcgccgccgccgcc 206 ||||| |||||||||||||||||| Sbjct: 22509 gctccttctcgcgccgccgccgcc 22486
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 gctccctctcgcgccgccgccgcc 206 ||||| |||||||||||||||||| Sbjct: 128061 gctccttctcgcgccgccgccgcc 128038
>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208007 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ccataaaagagagggagagg 99 |||||||||||||||||||| Sbjct: 72530 ccataaaagagagggagagg 72511
>dbj|AK072554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128I09, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 gctccctctcgcgccgccgccgcc 206 ||||| |||||||||||||||||| Sbjct: 56 gctccttctcgcgccgccgccgcc 79
>emb|X52376.1|RSRDS Rat retinal degradation slow (rds) mRNA Length = 1562 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 tggcgctctgctgcattctgctgc 234 |||||||||||||| ||||||||| Sbjct: 466 tggcgctctgctgctttctgctgc 489
>emb|AJ535071.1|OSA535071 Oryza sativa (japonica cultivar-group) mdr6 gene for MDR-like ABC transporter, exons 1-12 Length = 8274 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cctctcgcgccgccgccgcc 206 |||||||||||||||||||| Sbjct: 25 cctctcgcgccgccgccgcc 6
>dbj|D26448.1|BLYBAD Hordeum vulgare mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1826 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 gttcttgctcgacggcggga 273 |||||||||||||||||||| Sbjct: 222 gttcttgctcgacggcggga 241
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 gcgccgccgccgcccccttggcgc 216 ||||||||||||||||||| |||| Sbjct: 18670129 gcgccgccgccgcccccttagcgc 18670152 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,077,888 Number of Sequences: 3902068 Number of extensions: 4077888 Number of successful extensions: 129921 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127169 Number of HSP's gapped (non-prelim): 2752 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
