| Clone Name | bast77f10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full insert sequence Length = 1198 Score = 236 bits (119), Expect = 5e-59 Identities = 221/255 (86%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 151 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 210 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 262 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 211 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 270 Query: 263 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 322 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 271 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 330 Query: 323 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 382 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 331 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 390 Query: 383 gaagccgtggtacct 397 |||||| |||||||| Sbjct: 391 gaagccatggtacct 405
>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full insert sequence Length = 1187 Score = 236 bits (119), Expect = 5e-59 Identities = 221/255 (86%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 140 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 199 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 262 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 200 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 259 Query: 263 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 322 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 260 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 319 Query: 323 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 382 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 320 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 379 Query: 383 gaagccgtggtacct 397 |||||| |||||||| Sbjct: 380 gaagccatggtacct 394
>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full insert sequence Length = 1187 Score = 236 bits (119), Expect = 5e-59 Identities = 221/255 (86%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 140 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 199 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 262 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 200 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 259 Query: 263 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 322 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 260 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 319 Query: 323 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 382 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 320 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 379 Query: 383 gaagccgtggtacct 397 |||||| |||||||| Sbjct: 380 gaagccatggtacct 394
>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full insert sequence Length = 1399 Score = 236 bits (119), Expect = 5e-59 Identities = 221/255 (86%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 165 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 224 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaa 262 ||| |||||||| | ||||||||||| |||||| || |||||||||||||| |||||||| Sbjct: 225 ccggaagggcacgtacaaccaatccagggtcgccgagcagatggggaaggttggggagaa 284 Query: 263 gctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacggg 322 ||| | || |||||||| | |||||||| ||||| ||||||||||| |||||||| || Sbjct: 285 gctaaatatagacttcgtcatatccaccggtgacaatttctacgaggatggactcactgg 344 Query: 323 cgtccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgca 382 |||| |||||| | ||| ||||| || || ||| ||||||||| || ||||||||||| Sbjct: 345 cgtcgatgaccaggcgtttgaggaatcgtttaccgatatctacacggcaaagagcttgca 404 Query: 383 gaagccgtggtacct 397 |||||| |||||||| Sbjct: 405 gaagccatggtacct 419
>gb|AY108047.1| Zea mays PCO103710 mRNA sequence Length = 1513 Score = 163 bits (82), Expect = 6e-37 Identities = 220/266 (82%) Strand = Plus / Plus Query: 145 tggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactggggcc 204 ||||||||||| ||||| ||| ||| ||||| |||||||||||| |||| |||||||||| Sbjct: 234 tggagcacccgcccaaggacggcggctcgctcagcctgctcgtcgtcggcgactggggcc 293 Query: 205 gcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaagc 264 | |||||| | |||||||| |||| |||||| | |||||||| | ||| |||||| ||| Sbjct: 294 gaaagggcgcgttcaaccagtccagggtcgcccatcagatgggcagggttggggagcagc 353 Query: 265 tggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacgggcg 324 | |||||||||||| | |||||||||||||||||||||||| |||| || |||||| Sbjct: 354 tcagcatcgacttcgtcatatccaccggcgacaacttctacgagaacggcctgacgggca 413 Query: 325 tccatgaccggcagttcgaggagtccttcaccagtatctacacagccaagagcttgcaga 384 ||||| | ||||||| |||| |||||| ||||||||| || |||||| |||||| Sbjct: 414 cggatgacgaggcgttcgagcagtctttcaccgatatctacacggcgaagagcctgcaga 473 Query: 385 agccgtggtacctcgttcttggaaac 410 ||||||||||||| || || |||||| Sbjct: 474 agccgtggtacctggtgctgggaaac 499
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 8e-27 Identities = 86/93 (92%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 7292289 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 7292348 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgc 235 ||| |||||||| | ||||||||||| |||||| Sbjct: 7292349 ccggaagggcacgtacaaccaatccagggtcgc 7292381 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 240 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 299 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 7293100 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 7293159 Query: 300 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 359 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 7293160 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 7293219 Query: 360 atctacacagccaagagcttgcagaagccgtggtacct 397 |||||||| || ||||||||||||||||| |||||||| Sbjct: 7293220 atctacacggcaaagagcttgcagaagccatggtacct 7293257
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 129 bits (65), Expect = 8e-27 Identities = 86/93 (92%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 43545 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 43604 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgc 235 ||| |||||||| | ||||||||||| |||||| Sbjct: 43605 ccggaagggcacgtacaaccaatccagggtcgc 43637 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 240 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 299 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 44356 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 44415 Query: 300 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 359 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 44416 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 44475 Query: 360 atctacacagccaagagcttgcagaagccgtggtacct 397 |||||||| || ||||||||||||||||| |||||||| Sbjct: 44476 atctacacggcaaagagcttgcagaagccatggtacct 44513
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 8e-27 Identities = 86/93 (92%) Strand = Plus / Plus Query: 143 ggtggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| Sbjct: 7290184 ggtggagcacccggccaagagcgacgggtcgctgagcctgctcgtcgtcggcgactgggg 7290243 Query: 203 ccgcaagggcaccttcaaccaatccatggtcgc 235 ||| |||||||| | ||||||||||| |||||| Sbjct: 7290244 ccggaagggcacgtacaaccaatccagggtcgc 7290276 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 240 cagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaac 299 |||||||||||||| ||||||||||| | || |||||||| | |||||||| ||||| Sbjct: 7290995 cagatggggaaggttggggagaagctaaatatagacttcgtcatatccaccggtgacaat 7291054 Query: 300 ttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtccttcaccagt 359 ||||||||||| |||||||| |||||| |||||| | ||| ||||| || || ||| | Sbjct: 7291055 ttctacgaggatggactcactggcgtcgatgaccaggcgtttgaggaatcgtttaccgat 7291114 Query: 360 atctacacagccaagagcttgcagaagccgtggtacct 397 |||||||| || ||||||||||||||||| |||||||| Sbjct: 7291115 atctacacggcaaagagcttgcagaagccatggtacct 7291152
>gb|AY108108.1| Zea mays PCO072542 mRNA sequence Length = 1591 Score = 123 bits (62), Expect = 5e-25 Identities = 167/202 (82%) Strand = Plus / Plus Query: 124 gcgccgcggagctcccgctggtggagcacccggccaagaacgacgggtcgctgagcctgc 183 ||||||||||| | || | | |||||||| |||||| || |||||| ||||||| |||| Sbjct: 359 gcgccgcggagttgccccggctggagcactcggccaggagcgacggatcgctgaagctgc 418 Query: 184 tcgtcatcggggactggggccgcaagggcaccttcaaccaatccatggtcgcagaccaga 243 ||||| ||||||||||||| |||||||| || |||||| ||| |||||| ||||||| Sbjct: 419 tcgtcgtcggggactggggacgcaaggggactcacaaccagtcccgggtcgccgaccaga 478 Query: 244 tggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaacttct 303 |||| | ||||||| ||||||| || |||||||| || | |||||||| |||||||||| Sbjct: 479 tgggaagggtcgggaagaagctcgatatcgactttgttatatccaccggggacaacttct 538 Query: 304 acgaggacggactcacgggcgt 325 || || |||| |||| |||||| Sbjct: 539 acaagaacggcctcaagggcgt 560
>dbj|AK069660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L04, full insert sequence Length = 1313 Score = 117 bits (59), Expect = 3e-23 Identities = 155/187 (82%) Strand = Plus / Plus Query: 145 tggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactggggcc 204 ||||||||||| |||| |||||||||||||||||| |||| | |||| |||||||| | Sbjct: 172 tggagcacccgcgcaagggcgacgggtcgctgagcctcctcgccgtcggcgactgggggc 231 Query: 205 gcaagggcaccttcaaccaatccatggtcgcagaccagatggggaaggtcggggagaagc 264 || ||| | | |||||| || |||||||| | |||||||| | || ||||||||| Sbjct: 232 gccgcggcgcgtacaaccagtcgatggtcgccgcgcagatgggaatagtaggggagaaga 291 Query: 265 tggacatcgacttcgtggtctccaccggcgacaacttctacgaggacggactcacgggcg 324 |||||||||||||||| ||||||||||||||||||||||| || |||| ||||| |||| Sbjct: 292 tggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggcctcaccggcg 351 Query: 325 tccatga 331 || |||| Sbjct: 352 tcgatga 358
>gb|AC151599.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018H03, complete sequence Length = 93081 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 255 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 314 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 59215 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 59156 Query: 315 ctcacgggcgtccatga 331 ||||| |||||| |||| Sbjct: 59155 ctcaccggcgtcgatga 59139 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 145 tggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 ||||||||||| |||| |||||||||||||||||| |||| | |||| |||||||| Sbjct: 60841 tggagcacccgcgcaagggcgacgggtcgctgagcctcctcgccgtcggcgactgggg 60784
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 255 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 314 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 16734 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 16675 Query: 315 ctcacgggcgtccatga 331 ||||| |||||| |||| Sbjct: 16674 ctcaccggcgtcgatga 16658 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 145 tggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 ||||||||||| |||| |||||||||||||||||| |||| | |||| |||||||| Sbjct: 18360 tggagcacccgcgcaagggcgacgggtcgctgagcctcctcgccgtcggcgactgggg 18303
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Minus Query: 255 ggggagaagctggacatcgacttcgtggtctccaccggcgacaacttctacgaggacgga 314 ||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 19794273 ggggagaagatggacatcgacttcgtcatctccaccggcgacaacttctacaagaacggc 19794214 Query: 315 ctcacgggcgtccatga 331 ||||| |||||| |||| Sbjct: 19794213 ctcaccggcgtcgatga 19794197 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 145 tggagcacccggccaagaacgacgggtcgctgagcctgctcgtcatcggggactgggg 202 ||||||||||| |||| |||||||||||||||||| |||| | |||| |||||||| Sbjct: 19795899 tggagcacccgcgcaagggcgacgggtcgctgagcctcctcgccgtcggcgactgggg 19795842
>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid phosphatase (OSJNBa0023I19.10), mRNA Length = 1008 Score = 77.8 bits (39), Expect = 3e-11 Identities = 189/239 (79%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggcaccttcaaccaatccatgg 231 ||||| |||| |||||| |||| ||||||||||| |||||| || |||||| | | | Sbjct: 110 cgctgcgcctcctcgtcgtcggcgactggggccggaagggcggctacaaccagacaagag 169 Query: 232 tcgcagaccagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccg 291 | ||||| |||||||||||||| | |||| || ||| ||||||||||| || || |||| Sbjct: 170 ttgcagaacagatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccg 229 Query: 292 gcgacaacttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtcct 351 |||||||||||| ||| |||| ||| | |||||| | ||| | |||| | || |||| Sbjct: 230 gcgacaacttcttggagaacggcctcgccggcgtcgacgacatggcgttccatgactcct 289 Query: 352 tcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttcttggaaac 410 ||| | ||||||| || |||||||||| ||||| |||||||| |||||||||||| Sbjct: 290 tcatggatgtctacacggctcagagcttgcacaagccatggtaccttgttcttggaaac 348
>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full insert sequence Length = 1195 Score = 77.8 bits (39), Expect = 3e-11 Identities = 189/239 (79%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggcaccttcaaccaatccatgg 231 ||||| |||| |||||| |||| ||||||||||| |||||| || |||||| | | | Sbjct: 117 cgctgcgcctcctcgtcgtcggcgactggggccggaagggcggctacaaccagacaagag 176 Query: 232 tcgcagaccagatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccg 291 | ||||| |||||||||||||| | |||| || ||| ||||||||||| || || |||| Sbjct: 177 ttgcagaacagatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccg 236 Query: 292 gcgacaacttctacgaggacggactcacgggcgtccatgaccggcagttcgaggagtcct 351 |||||||||||| ||| |||| ||| | |||||| | ||| | |||| | || |||| Sbjct: 237 gcgacaacttcttggagaacggcctcgccggcgtcgacgacatggcgttccatgactcct 296 Query: 352 tcaccagtatctacacagccaagagcttgcagaagccgtggtacctcgttcttggaaac 410 ||| | ||||||| || |||||||||| ||||| |||||||| |||||||||||| Sbjct: 297 tcatggatgtctacacggctcagagcttgcacaagccatggtaccttgttcttggaaac 355
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 241 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 300 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062281 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062340 Query: 301 tct 303 ||| Sbjct: 1062341 tct 1062343 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggc 212 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062071 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062111
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 241 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 300 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 59734 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 59793 Query: 301 tct 303 ||| Sbjct: 59794 tct 59796 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggc 212 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 59524 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 59564
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 241 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 300 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062281 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062340 Query: 301 tct 303 ||| Sbjct: 1062341 tct 1062343 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggc 212 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062071 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062111
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 241 agatggggaaggtcggggagaagctggacatcgacttcgtggtctccaccggcgacaact 300 ||||||||||||| | |||| || ||| ||||||||||| || || ||||||||||||| Sbjct: 1062278 agatggggaaggttgcggaggagacggagatcgacttcgtcgtgtcaaccggcgacaact 1062337 Query: 301 tct 303 ||| Sbjct: 1062338 tct 1062340 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 172 cgctgagcctgctcgtcatcggggactggggccgcaagggc 212 ||||| |||| |||||| |||| ||||||||||| |||||| Sbjct: 1062068 cgctgcgcctcctcgtcgtcggcgactggggccggaagggc 1062108
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 81 gcggccgtggcgctcgccgtcctg 104 |||||||||||||||||||||||| Sbjct: 2440511 gcggccgtggcgctcgccgtcctg 2440488
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 92 gctcgccgtcctggccgtggccgcgctc 119 ||||||||| |||||||||||||||||| Sbjct: 3171506 gctcgccgtgctggccgtggccgcgctc 3171533 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccggcgcgtccgcggccgtg 89 |||||||||||||||||||| Sbjct: 3899870 ccggcgcgtccgcggccgtg 3899889
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 260 gaagctggacatcgacttcgtgg 282 ||||||||||||||||||||||| Sbjct: 1122325 gaagctggacatcgacttcgtgg 1122303 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ggagcggcgccggcgcgtccgcggc 85 ||||| ||||||||||||||||||| Sbjct: 448123 ggagctgcgccggcgcgtccgcggc 448147
>emb|AJ617676.1| Lupinus luteus mRNA for putative acid phosphatase (acPase3 gene) Length = 1328 Score = 46.1 bits (23), Expect = 0.089 Identities = 35/39 (89%) Strand = Plus / Plus Query: 239 ccagatggggaaggtcggggagaagctggacatcgactt 277 ||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 210 ccagatgggaaaggttggggagaagcttgacatagactt 248
>ref|XM_478795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 catggcgaggaggagcggcgccggcg 75 |||||||||||||||||||| ||||| Sbjct: 240 catggcgaggaggagcggcggcggcg 265
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 cgcggccgtggcgctcgccgtc 101 |||||||||||||||||||||| Sbjct: 569457 cgcggccgtggcgctcgccgtc 569436
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 catggcgaggaggagcggcgccggcg 75 |||||||||||||||||||| ||||| Sbjct: 23103272 catggcgaggaggagcggcggcggcg 23103297 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 23900457 ggcgaggaggagcggcgccg 23900476 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 6028474 ggcgaggaggagcggcgccg 6028455
>dbj|AK120026.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C10, full insert sequence Length = 2219 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 catggcgaggaggagcggcgccggcg 75 |||||||||||||||||||| ||||| Sbjct: 1729 catggcgaggaggagcggcggcggcg 1754
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 50 catggcgaggaggagcggcgccggcg 75 |||||||||||||||||||| ||||| Sbjct: 47456 catggcgaggaggagcggcggcggcg 47481
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Plus Query: 263 gctggacatcgacttcgtggtctccaccggcgac 296 ||||||||||||| ||| ||||||| |||||||| Sbjct: 3618089 gctggacatcgacgtcgcggtctccgccggcgac 3618122
>ref|XM_493906.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2118 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgccggcgcgtccgcgg 84 ||||||||||||||||||||| Sbjct: 211 gcggcgccggcgcgtccgcgg 191
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcgc 76 ||||||||||||||||||||| Sbjct: 35 gaggaggagcggcgccggcgc 55
>gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome 3, complete sequence Length = 207726 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 caagagcttgcagaagccgtg 391 ||||||||||||||||||||| Sbjct: 127814 caagagcttgcagaagccgtg 127834
>gb|AF308878.1| Lilium longiflorum acid phosphatase mRNA, partial cds Length = 334 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 339 ttcgaggagtccttcaccagtatctacacagccaagagcttgcagaagc 387 ||||||| |||||||| | ||| ||||| || |||||||||||||||| Sbjct: 280 ttcgaggcatccttcacaaatatatacactgcaaagagcttgcagaagc 328
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cgcggccgtggcgctcgccgtcctg 104 ||||||||||||||| ||||||||| Sbjct: 3179236 cgcggccgtggcgcttgccgtcctg 3179212
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 gctcgccgtcctggccgtggccgcg 116 |||||||||||||||||| |||||| Sbjct: 203015 gctcgccgtcctggccgtcgccgcg 203039
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcgc 76 ||||||||||||||||||||| Sbjct: 8458604 gaggaggagcggcgccggcgc 8458624
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgccggcgcgtccgcgg 84 ||||||||||||||||||||| Sbjct: 989908 gcggcgccggcgcgtccgcgg 989888
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcgc 76 ||||||||||||||||||||| Sbjct: 74321 gaggaggagcggcgccggcgc 74341
>ref|XM_313009.2| Anopheles gambiae str. PEST ENSANGP00000020356 (ENSANGG00000017867), mRNA Length = 1156 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 tcgccgtcctggccgtggccg 114 ||||||||||||||||||||| Sbjct: 198 tcgccgtcctggccgtggccg 218
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gccgcgctccggtgcgccgcg 131 ||||||||||||||||||||| Sbjct: 3794955 gccgcgctccggtgcgccgcg 3794975
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gcggcgccggcgcgtccgcgg 84 ||||||||||||||||||||| Sbjct: 80305 gcggcgccggcgcgtccgcgg 80285
>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence Length = 172679 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcg 75 |||||||||||||||||||| Sbjct: 153458 gaggaggagcggcgccggcg 153477
>ref|XM_518707.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA A630077B13 gene; RIKEN cDNA 2810048G17 (LOC462959), mRNA Length = 1191 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 608 tgcgccgcggagctgccgctggtg 631
>ref|XM_478936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 633 ggcgaggaggagcggcgccg 652
>ref|XM_477125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 813 ggcgaggaggagcggcgccg 794
>ref|XM_867270.1| PREDICTED: Bos taurus similar to neuron navigator 1 (LOC615460), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggggaaggtcggggagaagc 264 |||||||||||||||||||| Sbjct: 972 ggggaaggtcggggagaagc 991
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cgcggccgtggcgctcgccg 99 |||||||||||||||||||| Sbjct: 1829192 cgcggccgtggcgctcgccg 1829173
>gb|DQ097235.1| Toxoplasma gondii ATP-binding cassette sub-family B member 4 (ABC.B4) gene, complete cds Length = 9120 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggcgaggaggagcggcgcc 71 |||||||||||||||||||| Sbjct: 1272 tggcgaggaggagcggcgcc 1253
>gb|AC130222.4| Mus musculus BAC clone RP23-18K19 from chromosome 12, complete sequence Length = 218608 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gccgcgctccggtgcgccgcggag 134 ||||||||||| |||||||||||| Sbjct: 72470 gccgcgctccgttgcgccgcggag 72493
>emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene) Length = 1345 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tggcgctcgccgtcctggcc 107 |||||||||||||||||||| Sbjct: 61 tggcgctcgccgtcctggcc 80
>gb|AC159964.5| Mus musculus chromosome 1, clone RP24-321N12, complete sequence Length = 179413 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcg 75 |||||||||||||||||||| Sbjct: 58468 gaggaggagcggcgccggcg 58487
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ctgagcctgctcgtcatcgg 193 |||||||||||||||||||| Sbjct: 2664130 ctgagcctgctcgtcatcgg 2664111
>ref|XM_993832.1| PREDICTED: Mus musculus hypothetical protein LOC676894 (LOC676894), mRNA Length = 651 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaggaggagcggcgccggcg 75 |||||||||||||||||||| Sbjct: 540 gaggaggagcggcgccggcg 559
>ref|XM_536851.2| PREDICTED: Canis familiaris similar to C56E6.6 (LOC479725), mRNA Length = 2331 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccatggcgaggaggagcggc 68 |||||||||||||||||||| Sbjct: 271 ccatggcgaggaggagcggc 252
>emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on chromosome 6q21 Contains the 3' end of a novel gene, the SART2 gene for squamous cell carcinoma antigen recognised by T cell, a chromobox homolog 3 (HP1 gamma homolog, Drosophila) (CBX3) pseudogene, a keratin 18 (KRT18) pseudogene, a novel gene, part of a novel gene and two CpG islands, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 128336 tgcgccgcggagctgccgctggtg 128359
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gtggtctccaccggcgacaa 298 |||||||||||||||||||| Sbjct: 948208 gtggtctccaccggcgacaa 948227
>emb|X05167.1|HVLEU Barley gene for thiol protease aleurain Length = 5372 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tggcgctcgccgtcctggcc 107 |||||||||||||||||||| Sbjct: 1483 tggcgctcgccgtcctggcc 1502
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 agctggacatcgacttcgtg 281 |||||||||||||||||||| Sbjct: 5653928 agctggacatcgacttcgtg 5653947
>dbj|AK147591.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1085H19 product:signal-induced proliferation-associated 1 like 1, full insert sequence Length = 8207 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 gccgcgctccggtgcgccgcggag 134 ||||||||||| |||||||||||| Sbjct: 440 gccgcgctccgttgcgccgcggag 417
>dbj|AK044664.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930031B08 product:similar to CENTROSOME-ASSOCIATED PROTEIN 350 [Homo sapiens], full insert sequence Length = 1568 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaggaggagcggcgccggcg 75 |||||||||||||||||||| Sbjct: 67 gaggaggagcggcgccggcg 48
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccggcgc 76 ||||||||||||||| |||||||| Sbjct: 28341089 ggcgaggaggagcggagccggcgc 28341112
>ref|NM_001010919.1| Homo sapiens hypothetical protein LOC441168 (LOC441168), mRNA Length = 1109 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 531 tgcgccgcggagctgccgctggtg 554
>ref|XM_341136.2| PREDICTED: Rattus norvegicus centrosome-associated protein 350 (Cap350), mRNA Length = 7943 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaggaggagcggcgccggcg 75 |||||||||||||||||||| Sbjct: 66 gaggaggagcggcgccggcg 47
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgccggcgcgtccgcggccg 87 |||||||||||||||||||| Sbjct: 3917478 cgccggcgcgtccgcggccg 3917497
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 55384 ggcgaggaggagcggcgccg 55403
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 83644 ggcgaggaggagcggcgccg 83625
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccg 72 |||||||||||||||||||| Sbjct: 88957 ggcgaggaggagcggcgccg 88976
>emb|AJ339001.1|HSA339001 Homo sapiens genomic sequence surrounding NotI site, clone NL6-GM8R Length = 718 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ340532.1|HSA340532 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XI21R Length = 712 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ340095.1|HSA340095 Homo sapiens genomic sequence surrounding NotI site, clone NL6-BO10R Length = 674 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>emb|AJ323676.1|HSA323676 Homo sapiens genomic sequence surrounding NotI site, clone NR1-085C Length = 585 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 tgcgccgcggagctcccgctggtg 146 |||||||||||||| ||||||||| Sbjct: 127 tgcgccgcggagctgccgctggtg 150
>gb|AF126490.1|AF126490 Rhodobacter sphaeroides f. sp. denitrificans Nor operon, partial sequence Length = 4297 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 atggcgaggaggagcggcgccggc 74 |||||||||||||||| ||||||| Sbjct: 843 atggcgaggaggagcgccgccggc 866
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 agctggacatcgacttcgtg 281 |||||||||||||||||||| Sbjct: 1204941 agctggacatcgacttcgtg 1204922
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgcgctccggtgcgccgcg 131 |||||||||||||||||||| Sbjct: 1123574 ccgcgctccggtgcgccgcg 1123593
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgaggaggagcggcgccggcgc 76 ||||||||||||||| |||||||| Sbjct: 133397 ggcgaggaggagcggagccggcgc 133420 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,461,022 Number of Sequences: 3902068 Number of extensions: 2461022 Number of successful extensions: 55019 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53003 Number of HSP's gapped (non-prelim): 2013 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)