Clone Information

BLAST Search Result

Clone Name	bast77f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven...	276	2e-74
2	SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2....	276	2e-74
3	SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven...	276	3e-74
4	SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven...	270	2e-72
5	SINA5_ARATH (Q8S3N1) Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven...	268	4e-72
6	SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven ...	117	1e-26
7	SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in...	116	3e-26
8	SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven...	116	3e-26
9	SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven ...	115	4e-26
10	SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven...	115	6e-26
11	SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in...	112	6e-25
12	SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein...	108	5e-24
13	SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in...	108	7e-24
14	SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in...	108	7e-24
15	SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in...	108	7e-24
16	SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in...	107	2e-23
17	SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in...	102	4e-22
18	SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ...	102	4e-22
19	SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ...	102	4e-22
20	SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven ...	102	7e-22
21	SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ...	100	2e-21
22	SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven i...	97	2e-20
23	PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3...	42	8e-04
24	PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (...	41	0.002
25	PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3...	40	0.002
26	TRI50_PIG (Q865W2) Tripartite motif protein 50	35	0.099
27	PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4...	33	0.29
28	TNR3_MOUSE (P50284) Tumor necrosis factor receptor superfamily m...	33	0.37
29	RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)	32	0.64
30	ZN313_MOUSE (Q9ET26) Zinc finger protein 313	32	0.83
31	ZN313_RAT (Q6J2U6) Zinc finger protein 313	31	1.4
32	PPNK_LACJO (Q74KC7) Probable inorganic polyphosphate/ATP-NAD kin...	31	1.4
33	CI096_MACFA (Q4R793) Protein kinase-like protein C9orf96 homolog	31	1.9
34	ZN540_PONPY (Q5R5S6) Zinc finger protein 540	31	1.9
35	ZN540_HUMAN (Q8NDQ6) Zinc finger protein 540	30	2.4
36	DG17_DICDI (P11467) Protein DG17	30	2.4
37	MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p...	30	2.4
38	MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	30	2.4
39	MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	30	2.4
40	ISPG_ACIAD (Q6FEM3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	30	2.4
41	ZN313_PIG (Q6J1I8) Zinc finger protein 313	30	3.2
42	ZN313_PANTR (Q6J212) Zinc finger protein 313	30	3.2
43	ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protei...	30	3.2
44	IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)	30	3.2
45	ZN313_BOVIN (Q4U5R4) Zinc finger protein 313	30	3.2
46	SIM2_HUMAN (Q14190) Single-minded homolog 2	30	3.2
47	TRI50_HUMAN (Q86XT4) Tripartite motif protein 50	30	4.1
48	RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein li...	30	4.1
49	CSKI2_MOUSE (Q8VHK1) Caskin-2	29	5.4
50	MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination prote...	29	5.4
51	MRAW_METCA (Q604V0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)	29	7.1
52	TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-...	29	7.1
53	RNF4_RAT (O88846) RING finger protein 4 (SNURF)	29	7.1
54	RNF4_MOUSE (Q9QZS2) RING finger protein 4	29	7.1
55	RNF4_HUMAN (P78317) RING finger protein 4	29	7.1
56	IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)	29	7.1
57	ISPG_IDILO (Q5QYA9) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...	28	9.2
58	SIM2_MOUSE (Q61079) Single-minded homolog 2 (SIM transcription f...	28	9.2
59	TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-...	28	9.2
60	SIM1_HUMAN (P81133) Single-minded homolog 1	28	9.2
61	SIM1_MOUSE (Q61045) Single-minded homolog 1 (mSIM1)	28	9.2

>SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven in absentia|
           homolog 3)
          Length = 326

 Score =  276 bits (706), Expect = 2e-74
 Identities = 120/153 (78%), Positives = 135/153 (88%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC NGHT+CS+CK RV N CPTCRQELG+IRCLALEKVAES++LPCK+ SLGC EI PY 
Sbjct: 76  QCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYY 135

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGCTFNHRYVKSNPY 361
           +KLKHE +C FRPYSCPYAGSEC + GD+P LV+HL +DHKVD+H GCTFNHRYVKSNP 
Sbjct: 136 SKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPR 195

Query: 362 EVENATWMLTVFKCFGQHFCLHFEAFLLGMSPV 460
           EVENATWMLTVF CFGQ+FCLHFEAF LGM+PV
Sbjct: 196 EVENATWMLTVFHCFGQYFCLHFEAFQLGMAPV 228

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>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in|
           absentia homolog 1)
          Length = 305

 Score =  276 bits (706), Expect = 2e-74
 Identities = 119/153 (77%), Positives = 136/153 (88%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QCPNGHT+CSSCK RV N CPTCR ELGNIRCLALEKVAES+++PC+YQ+LGC +I PY 
Sbjct: 70  QCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYY 129

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGCTFNHRYVKSNPY 361
           +KLKHE+ CRFR YSCPYAGSEC + GD+P LV HL +DHKVD+H+GCTFNHRYVKSNP+
Sbjct: 130 SKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPH 189

Query: 362 EVENATWMLTVFKCFGQHFCLHFEAFLLGMSPV 460
           EVENATWMLTVF CFG+ FCLHFEAF LGM+PV
Sbjct: 190 EVENATWMLTVFNCFGRQFCLHFEAFQLGMAPV 222

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>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2)
          Length = 308

 Score =  276 bits (705), Expect = 3e-74
 Identities = 118/153 (77%), Positives = 137/153 (89%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QCPNGHT+CS+CK RV N CPTCR ELGNIRCLALEKVAES+++PC+YQ+LGC +I PY 
Sbjct: 73  QCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYY 132

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGCTFNHRYVKSNPY 361
           +KLKHE+ CRFRPY+CPYAGSEC + GD+P LV HL +DHKVD+H+GCTFNHRYVKSNP+
Sbjct: 133 SKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPH 192

Query: 362 EVENATWMLTVFKCFGQHFCLHFEAFLLGMSPV 460
           EVENATWMLTVF CFG+ FCLHFEAF LGM+PV
Sbjct: 193 EVENATWMLTVFNCFGRQFCLHFEAFQLGMAPV 225

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>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia|
           homolog 4)
          Length = 327

 Score =  270 bits (689), Expect = 2e-72
 Identities = 119/153 (77%), Positives = 133/153 (86%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC NGHT+CS+CK RV N CPTCRQELG+IRCLALEKVAES++LPCK+ +LGC EI PY 
Sbjct: 77  QCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYY 136

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGCTFNHRYVKSNPY 361
           +KLKHE +C FRPYSCPYAGSEC I GD+P LV+HL +DHKVD+H G TFNHRYVKSNP 
Sbjct: 137 SKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPR 196

Query: 362 EVENATWMLTVFKCFGQHFCLHFEAFLLGMSPV 460
           EVENATWMLTVF CFGQ+FCLHFEAF LGM PV
Sbjct: 197 EVENATWMLTVFHCFGQYFCLHFEAFQLGMGPV 229

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>SINA5_ARATH (Q8S3N1) Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia|
           homolog 5)
          Length = 309

 Score =  268 bits (686), Expect = 4e-72
 Identities = 118/153 (77%), Positives = 132/153 (86%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC NGHT+CS+CK RV N CPTCRQELG+IRCLALEKVAES++LPCKY +LGC  I PY 
Sbjct: 59  QCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYY 118

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGCTFNHRYVKSNPY 361
           +KLKHE  C FRPYSCPYAGSEC   GD+  LV+HL +DHKVD+H GCTFNHRYVKSNP 
Sbjct: 119 SKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPR 178

Query: 362 EVENATWMLTVFKCFGQHFCLHFEAFLLGMSPV 460
           EVENATWMLTVF+CFGQ+FCLHFEAF LGM+PV
Sbjct: 179 EVENATWMLTVFQCFGQYFCLHFEAFQLGMAPV 211

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>SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1) (Siah-1)
          Length = 282

 Score =  117 bits (294), Expect = 1e-26
 Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR  LG+IR LA+EKVA S+  PCKY S GC    P+ 
Sbjct: 54  QCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHT 112

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
           +K +HEE+C FRPYSCP  G+ C   G +  ++ HL++ HK +   +G         +  
Sbjct: 113 DKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQG---EDIVFLATD 169

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 170 INLPGAVDWVMMQSCFGFHFMLVLE 194

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>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1) (Siah-1) (Siah-1a)
          Length = 282

 Score =  116 bits (291), Expect = 3e-26
 Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR  LG+IR LA+EKVA S+  PCKY S GC    P+ 
Sbjct: 54  QCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHT 112

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE+C FRPYSCP  G+ C   G +  ++ HL++ HK +   +G         +  
Sbjct: 113 EKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQG---EDIVFLATD 169

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 170 INLPGAVDWVMMQSCFGFHFMLVLE 194

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>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia|
           homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a)
          Length = 282

 Score =  116 bits (291), Expect = 3e-26
 Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR  LG+IR LA+EKVA S+  PCKY S GC    P+ 
Sbjct: 54  QCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHT 112

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE+C FRPYSCP  G+ C   G +  ++ HL++ HK +   +G         +  
Sbjct: 113 EKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQG---EDIVFLATD 169

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 170 INLPGAVDWVMMQSCFGFHFMLVLE 194

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>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1) (Siah-1) (Siah-1a)
          Length = 282

 Score =  115 bits (289), Expect = 4e-26
 Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR  LG+IR LA+EKVA S+  PCKY S GC    P+ 
Sbjct: 54  QCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHT 112

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K  HEE+C FRPYSCP  G+ C   G +  ++ HL++ HK +   +G         +  
Sbjct: 113 EKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQG---EDIVFLATD 169

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 170 INLPGAVDWVMMQSCFGFHFMLVLE 194

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>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia|
           homolog 1b) (Siah1b) (Siah-1b)
          Length = 282

 Score =  115 bits (288), Expect = 6e-26
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR  LG+IR LA+EKVA S+  PCKY + GC    P+ 
Sbjct: 54  QCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAVEKVANSVLFPCKYSASGCEITLPHT 112

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE+C FRPYSCP  G+ C   G +  ++ HL++ HK +   +G         +  
Sbjct: 113 KKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQG---EDIVFLATD 169

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 170 INLPGAVDWVMMQSCFGFHFMLVLE 194

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>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           homolog) (SmSINA)
          Length = 371

 Score =  112 bits (279), Expect = 6e-25
 Identities = 46/101 (45%), Positives = 67/101 (66%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +C+SC+ ++ + CPTCR  L NIR LA+EK+A S+  PCKY + GC E   Y 
Sbjct: 139 QCQSGHIVCASCRSKLSS-CPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYT 197

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK 304
           +K +HE  C +RPY CP  G+ C   G++  ++ HL++ HK
Sbjct: 198 SKSEHEAACEYRPYDCPCPGASCKWLGELEQVMPHLVHHHK 238

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>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC|
           6.3.2.-)
          Length = 351

 Score =  108 bits (271), Expect = 5e-24
 Identities = 60/150 (40%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QCP GH ICS+C+ ++   CP CR  + NIR LA+EKVA  +  PCK+   GC     Y 
Sbjct: 119 QCPRGHLICSTCRSKL-TICPVCRVFMTNIRSLAMEKVASKLIFPCKHSHFGCRARLSYA 177

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K KHEE C  RPY CPY   +C   G +  +  HL++ H+ V   EG   N     +  
Sbjct: 178 EKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENVITMEG---NDIIFLATN 234

Query: 359 YEVENATWMLTVFKCFGQHFCLHFEAFLLG 448
             +E A     V  C G+HF L  E   LG
Sbjct: 235 VNLEGALDWTMVQSCHGRHFLLSLEKINLG 264

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>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           protein)
          Length = 314

 Score =  108 bits (270), Expect = 7e-24
 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +C SC+ ++   CPTCR  L NIR LA+EKVA +++ PCK+   GCT    Y 
Sbjct: 86  QCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYT 144

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE C  RPY CP  G+ C   G + +++ HL+  HK +   +G         +  
Sbjct: 145 EKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG---EDIVFLATD 201

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 202 INLPGAVDWVMMQSCFGHHFMLVLE 226

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>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           protein)
          Length = 314

 Score =  108 bits (270), Expect = 7e-24
 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +C SC+ ++   CPTCR  L NIR LA+EKVA +++ PCK+   GCT    Y 
Sbjct: 86  QCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYT 144

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE C  RPY CP  G+ C   G + +++ HL+  HK +   +G         +  
Sbjct: 145 EKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG---EDIVFLATD 201

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 202 INLPGAVDWVMMQSCFGHHFMLVLE 226

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>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           protein)
          Length = 331

 Score =  108 bits (270), Expect = 7e-24
 Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +C SC+ ++   CPTCR  L NIR LA+EKVA +++ PCK+   GCT    Y 
Sbjct: 103 QCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGCTASLVYT 161

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE C  RPY CP  G+ C   G + +++ HL+  HK +   +G         +  
Sbjct: 162 EKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG---EDIVFLATD 218

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 219 INLPGAVDWVMMQSCFGHHFMLVLE 243

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>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia|
           protein)
          Length = 314

 Score =  107 bits (266), Expect = 2e-23
 Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +C SC+ ++   CPTCR  L NIR LA+E+VA +++ PCK+   GCT    Y 
Sbjct: 86  QCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEEVASNVKFPCKHSGYGCTASLVYT 144

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSNP 358
            K +HEE C  RPY CP  G+ C   G + +++ HL+  HK +   +G         +  
Sbjct: 145 EKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQG---EDIVFLATD 201

Query: 359 YEVENATWMLTVFKCFGQHFCLHFE 433
             +  A   + +  CFG HF L  E
Sbjct: 202 INLPGAVDWVMMQSCFGHHFMLVLE 226

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>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2)
          Length = 325

 Score =  102 bits (255), Expect = 4e-22
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELG-NIRCLALEKVAESIQLPCKYQSLGCTEIHPY 178
           QC  GH +C+ C+ ++ + CPTCR  L  +IR LA+EKVA ++  PCKY + GC+    +
Sbjct: 94  QCQAGHLVCNQCRQKL-SCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHH 152

Query: 179 QNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSN 355
             K +HE+IC +RPYSCP  G+ C   G +  ++SHL++ HK +   +G         + 
Sbjct: 153 TEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQG---EDIVFLAT 209

Query: 356 PYEVENATWMLTVFKCFGQHFCLHFE 433
              +  A   + +  CFG HF L  E
Sbjct: 210 DINLPGAVDWVMMQSCFGHHFMLVLE 235

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>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (mSiah2)
          Length = 325

 Score =  102 bits (255), Expect = 4e-22
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELG-NIRCLALEKVAESIQLPCKYQSLGCTEIHPY 178
           QC  GH +C+ C+ ++ + CPTCR  L  +IR LA+EKVA ++  PCKY + GC+    +
Sbjct: 94  QCQAGHLVCNQCRQKL-SCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHH 152

Query: 179 QNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSN 355
             K +HE+IC +RPYSCP  G+ C   G +  ++SHL++ HK +   +G         + 
Sbjct: 153 TEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQG---EDIVFLAT 209

Query: 356 PYEVENATWMLTVFKCFGQHFCLHFE 433
              +  A   + +  CFG HF L  E
Sbjct: 210 DINLPGAVDWVMMQSCFGHHFMLVLE 235

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>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (hSiah2)
          Length = 324

 Score =  102 bits (255), Expect = 4e-22
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELG-NIRCLALEKVAESIQLPCKYQSLGCTEIHPY 178
           QC  GH +C+ C+ ++ + CPTCR  L  +IR LA+EKVA ++  PCKY + GC+    +
Sbjct: 93  QCQAGHLVCNQCRQKL-SCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHH 151

Query: 179 QNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSN 355
             K +HE+IC +RPYSCP  G+ C   G +  ++SHL++ HK +   +G         + 
Sbjct: 152 TEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQG---EDIVFLAT 208

Query: 356 PYEVENATWMLTVFKCFGQHFCLHFE 433
              +  A   + +  CFG HF L  E
Sbjct: 209 DINLPGAVDWVMMQSCFGHHFMLVLE 234

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>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2-like) (Siah-2)
          Length = 331

 Score =  102 bits (253), Expect = 7e-22
 Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELG-NIRCLALEKVAESIQLPCKYQSLGCTEIHPY 178
           QC  GH +C+ C+ ++ + CPTCR  L  +IR LA+EKVA ++  PCKY S GC     +
Sbjct: 102 QCQAGHLVCNQCRQKL-SCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYSSAGCLLSLHH 160

Query: 179 QNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSN 355
             K +HEE+C FRPY+CP  G+ C   G +  ++ HL++ HK +   +G         + 
Sbjct: 161 SEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHAHKSITTLQG---EDIVFLAT 217

Query: 356 PYEVENATWMLTVFKCFGQHFCLHFE 433
              +  A   + +  CFG HF L  E
Sbjct: 218 DINLPGAVDWVMMQSCFGHHFMLVLE 243

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>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Xsiah-2)
          Length = 313

 Score =  100 bits (249), Expect = 2e-21
 Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELG-NIRCLALEKVAESIQLPCKYQSLGCTEIHPY 178
           QC  GH +C+ C+ ++ + CPTCR  L  +IR LA+EKVA ++  PCKY S GC+    +
Sbjct: 82  QCQAGHLVCNQCRQKL-SCCPTCRASLTPSIRNLAMEKVASAVLFPCKYASTGCSLSLHH 140

Query: 179 QNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK-VDLHEGCTFNHRYVKSN 355
             K +HE+IC +RPYSCP  G+ C   G +  ++ HL + HK +   +G          N
Sbjct: 141 TEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKSITTLQGEDIVFLATDIN 200

Query: 356 -PYEVENATWMLTVFKCFGQHFCLHFE 433
            P  V+   W++  + CF  HF L  E
Sbjct: 201 LPGAVD---WVMMQY-CFNHHFMLVLE 223

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>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia|
           homolog 1)
          Length = 339

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 41/101 (40%), Positives = 63/101 (62%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           QC +GH +CS+C+ ++   CPTCR    ++R L LEK+A +++ PCK+ + GC     + 
Sbjct: 103 QCSSGHLVCSNCRPKLQC-CPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHA 161

Query: 182 NKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLINDHK 304
           +K +HEE+C FRPY CP  G+ C   G +  ++ HL   HK
Sbjct: 162 DKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHK 202

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>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of|
           Numb-protein X 3) (Semaphorin cytoplasmic
           domain-associated protein 3) (SEMACAP3 protein)
          Length = 1066

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8   PNGHTICSSCKHR---VDNHCPT-CR-----QELGNIRCLALEKVAESIQLPCKYQSLGC 160
           P GH  C+ C       +  CP  CR     +EL ++  L L+++   + + C Y + GC
Sbjct: 32  PCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV--LPLKRLILKLDIKCAYATRGC 89

Query: 161 TEIHPYQNKLKHEEICRFRPYSCPYAG-SECLIAGDV 268
             +   Q   +H E C F P  C +AG  + L+  DV
Sbjct: 90  GRVVKLQQLPEHLERCDFAPARCRHAGCGQVLLRRDV 126

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>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1062

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8   PNGHTICSSCKHR---VDNHCPT-CR-----QELGNIRCLALEKVAESIQLPCKYQSLGC 160
           P GH  C+ C       +  CP+ CR     +EL ++  L L+++   + + C + + GC
Sbjct: 32  PCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHV--LPLKRLILKLDIKCAHAARGC 89

Query: 161 TEIHPYQNKLKHEEICRFRPYSCPYAG-SECLIAGDV 268
             +   Q+  +H E C F P  C +AG  + L+  DV
Sbjct: 90  GRVVKLQDLPEHLERCDFAPARCRHAGCGQLLLRRDV 126

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>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1063

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
 Frame = +2

Query: 8   PNGHTICSSCKHR---VDNHCPT-CR-----QELGNIRCLALEKVAESIQLPCKYQSLGC 160
           P GH  C+ C       +  CP  CR     +EL ++  L L+++   + + C + + GC
Sbjct: 32  PCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHV--LPLKRLILKLDIKCAHAARGC 89

Query: 161 TEIHPYQNKLKHEEICRFRPYSCPYAG-SECLIAGDV 268
             +   Q+  +H E C F P  C +AG  + L+  DV
Sbjct: 90  GRVVKLQDLPEHLERCDFAPARCRHAGCGQLLLRRDV 126

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>TRI50_PIG (Q865W2) Tripartite motif protein 50|
          Length = 486

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNH------CPTCRQELGNIRC---LALEKVAESIQLPCKYQSL 154
           QC  GH+ C  C   +  H      CP CRQE+ +      ++L +V E++QLP   +  
Sbjct: 30  QC--GHSYCKGCLLSLSRHLDSELRCPVCRQEVDSSSSPPNVSLARVIEALQLPGDPEPQ 87

Query: 155 GCT 163
            CT
Sbjct: 88  VCT 90

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>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of|
           Numb-protein X 4) (SEMACAP3-like protein)
          Length = 1036

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
 Frame = +2

Query: 8   PNGHTICSSC-------KHRVDNHC-PTCRQELGNIRCLALEKVAESIQLPCKYQSLGCT 163
           P GH  C+SC       + R    C P    EL   R L L  + + +++ C Y++ GC 
Sbjct: 32  PCGHVFCASCLLPWAVRRRRCPLQCQPLAPGEL--YRVLPLRSLIQKLRVQCDYRARGCG 89

Query: 164 EIHPYQNKLKHEEICRFRP 220
                     H E C F P
Sbjct: 90  HSVRLHELEAHVEHCDFGP 108

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>TNR3_MOUSE (P50284) Tumor necrosis factor receptor superfamily member 3|
           precursor (Lymphotoxin-beta receptor)
          Length = 415

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQ 181
           +CP G  + + C    D  C TC     N     L      +  PC    LG  E+ P  
Sbjct: 61  RCPPGEFVFAVCSRSQDTVCKTCPHNSYNEHWNHLSTC--QLCRPCDI-VLGFEEVAPCT 117

Query: 182 NKLKHEEICRFRP-YSCPYAGSECL 253
           +  K E  CR +P  SC Y  +EC+
Sbjct: 118 SDRKAE--CRCQPGMSCVYLDNECV 140

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>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1151

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 9/46 (19%)
 Frame = +2

Query: 17   HTICSSCKHRVDNH---------CPTCRQELGNIRCLALEKVAESI 127
            H  C  C     N          CP CR+++   RCLA EK ++ I
Sbjct: 917  HVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKGSDGI 962

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>ZN313_MOUSE (Q9ET26) Zinc finger protein 313|
          Length = 229

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R + LE+  ESI+  C
Sbjct: 42  QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIESIETSC 92

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>ZN313_RAT (Q6J2U6) Zinc finger protein 313|
          Length = 229

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R   LE+  ESI+  C
Sbjct: 42  QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAAELERQIESIETSC 92

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>PPNK_LACJO (Q74KC7) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 270

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +2

Query: 146 QSLGCTEIHPYQNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSHLI--NDHKVDLHE 319
           +SLG   IHP    L+  EI            S  +IA D  + +      +DH V   +
Sbjct: 164 KSLGGAVIHPRLKALQMTEIASINNRVFRTLSSPIVIAPDEWITIKPETGSDDHYVVTFD 223

Query: 320 GCTFNHRYVKSNPYEV 367
           G  FNH+++K   Y +
Sbjct: 224 GYEFNHKHIKKIEYRI 239

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>CI096_MACFA (Q4R793) Protein kinase-like protein C9orf96 homolog|
          Length = 649

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
 Frame = -1

Query: 325 AAFVQVHLVVVDEMRHEHRNVACDQAL*TCVWTAVW--PEPADLLMLKFVLVRMDL---G 161
           A  + +HL+    + H      C+QA+ + V +A+W  PE   LL+L + L+ +      
Sbjct: 348 ACSLLLHLLGQAMVHHPEAKALCNQAITSAVLSALWSYPEEESLLVLVYSLLAITTTQES 407

Query: 160 AAQALVLAWKLDRFG---HLLESQASDI-SQFLAASGAMVVYPMLTAG 29
            +++  ++ +L   G   H+LE   S + S+ +  SG  +++ +L  G
Sbjct: 408 QSESESVSEELQNAGLLEHILEHLNSSLESRDVCVSGLGLLWALLLDG 455

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>ZN540_PONPY (Q5R5S6) Zinc finger protein 540|
          Length = 660

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/70 (24%), Positives = 26/70 (37%)
 Frame = +2

Query: 47  VDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQNKLKHEEICRFRPYS 226
           V + C  C     N+  L L +   + +  CK +  G    H YQ  L        +PY 
Sbjct: 185 VKHDCKECGSTFNNVYQLTLHQKIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKPYE 244

Query: 227 CPYAGSECLI 256
           C   G   ++
Sbjct: 245 CQECGKTFIL 254

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>ZN540_HUMAN (Q8NDQ6) Zinc finger protein 540|
          Length = 660

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = +2

Query: 47  VDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTEIHPYQNKLKHEEICRFRPYS 226
           V + C  C     N+  L L +   + +  CK +  G    H YQ  L        +PY 
Sbjct: 185 VKHDCKECGSTFNNVYQLTLHQKIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKPYE 244

Query: 227 CPYAG 241
           C   G
Sbjct: 245 CQECG 249

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>DG17_DICDI (P11467) Protein DG17|
          Length = 458

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHR---VDNHCPTCRQELGNI----RCLALEKVAESIQLPCKY 145
           QC +GH  C  C  +       C TC+  + +     RCL +E+  +  +  C Y
Sbjct: 41  QCKSGHHACKECWEKSLETKKECMTCKSVVNSYNDLSRCLMVERAFDKKECCCIY 95

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>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3|
           homolog (Histone-lysine N-methyltransferase, H3 lysine-4
           specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +2

Query: 23  ICSSCKHRVDNHCPTCRQELGNIRCLALEKVAESIQLPCKYQSLGCTE--IHPYQNKLKH 196
           IC +C  + DN CP C    G      L+K      +  ++  L C +   H    +LK 
Sbjct: 455 ICDNCYQQQDNLCPFC----GKCYHPELQKDMLHCNMCKRWVHLECDKPTDHELDTQLKE 510

Query: 197 EEICRFRPYSCPYAGSE 247
           E IC +    C + G+E
Sbjct: 511 EYICMY----CKHLGAE 523

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>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 445

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 5   CPNGHTI-CSSCKHRVDNHCPTCRQELGNIR 94
           CP GHT+ C SC  ++ + CP CR  + +++
Sbjct: 400 CPCGHTVCCESCAAQLQS-CPVCRSRVEHVQ 429

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>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 445

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 5   CPNGHTI-CSSCKHRVDNHCPTCRQELGNIR 94
           CP GHT+ C SC  ++ + CP CR  + +++
Sbjct: 400 CPCGHTVCCESCAAQLQS-CPVCRSRVEHVQ 429

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>ISPG_ACIAD (Q6FEM3) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 371

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +2

Query: 59  CPTC-RQELGNIRCL-ALEKVAESIQLPCKYQSLGCTEIHPYQNKLKHEEICRFRPYSCP 232
           CP+C RQE   I+ + ALE+  E I+ P     +GC    P + K     I    P S  
Sbjct: 269 CPSCSRQEFNVIKVMQALEERLEDIRTPMDLSVIGCKVNGPGEAKEADIGIVGASPRSLV 328

Query: 233 YAGSECLIAGDVPMLVSHL 289
           Y   E     D   LV  +
Sbjct: 329 YRNGEKSHLIDTDQLVDEI 347

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>ZN313_PIG (Q6J1I8) Zinc finger protein 313|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R + LE+  ES +  C
Sbjct: 41  QVPCGHVFCSACLQECLKPKKPVCGVCRSTLAPGVRAVELERQIESTETSC 91

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>ZN313_PANTR (Q6J212) Zinc finger protein 313|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R + LE+  ES +  C
Sbjct: 41  QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIESTETSC 91

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>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)|
          Length = 228

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R + LE+  ES +  C
Sbjct: 41  QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIESTETSC 91

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>IAP1_NPVOP (O10296) Apoptosis inhibitor 1 (IAP-1)|
          Length = 275

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 23  ICSSCKHRVDNHCPTCRQELGN 88
           +C  C   +D  CPTCRQ++ +
Sbjct: 247 VCMQCYFALDGKCPTCRQDVAD 268

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>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313|
          Length = 230

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRV----DNHCPTCRQELG-NIRCLALEKVAESIQLPC 139
           Q P GH  CS+C           C  CR  L   +R + LE+  ES +  C
Sbjct: 43  QVPCGHVFCSACLQECLKPKKPVCGVCRSALAPGVRAVELERQIESTETSC 93

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>SIM2_HUMAN (Q14190) Single-minded homolog 2|
          Length = 667

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 418 EVLTKTLEHSEHPCRVFHFVRVGLHVAVVKG 326
           +++ KTL H  H C VFH +R   H+ +VKG
Sbjct: 259 DLIEKTLYHHVHGCDVFH-LRYAHHLLLVKG 288

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>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50|
          Length = 487

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
 Frame = +2

Query: 2   QCPNGHTICSSCKHRVDNH------CPTCRQEL---GNIRCLALEKVAESIQLP 136
           QC  GH+ C  C   +  H      CP CRQ +    ++  ++L +V E+++LP
Sbjct: 30  QC--GHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLPNVSLARVIEALRLP 81

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>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 344

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
 Frame = +2

Query: 14  GHTICSSCKHR----VDNHCPTCRQE 79
           GHT CS C  R        CPTC QE
Sbjct: 44  GHTFCSLCIQRYLTNTSQRCPTCMQE 69

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>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 46  GRQPLPHLPPGTGKYQMLGSREGGRIDPASMQVPKPGLHRDPSLPEQ 186
           G +PLP  P  +   + +G+R  G        VP+P +  DPS P++
Sbjct: 683 GSEPLPLPPARSPSQESIGARSRGSGHSQEQPVPQPSV-GDPSAPQE 728

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>MSC6_YEAST (Q08818) Meiotic sister-chromatid recombination protein 6,|
           mitochondrial precursor
          Length = 692

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +2

Query: 269 PMLVSHLINDHKVDLHEGCTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLG 448
           PM  SHL+ +   DL +  ++  + +  +PY+V N      + +   QHF +  +  L  
Sbjct: 98  PMERSHLLANFSSDLLQELSYRSKNMTLDPYQVLNTLCQYKLAR--SQHFTIVLKYLLYN 155

Query: 449 MSP 457
            SP
Sbjct: 156 QSP 158

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>MRAW_METCA (Q604V0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 301

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -3

Query: 386 ASMSRFPLRKGWTSRSGG*RCSLRASPPCGR**DETRASERRLRSGTLNLRMD 228
           + + RF   +GWT R  G    L  S P     D  R     LR+G L++RMD
Sbjct: 73  SDVGRFVGARGWTGRVDGILMDLGVSSPQL---DNARRGFSFLRAGPLDMRMD 122

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>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain|
           associated with RING and Traf domains protein 1)
           (Malignant 62) (RING finger protein 83)
          Length = 470

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 26/104 (25%), Positives = 35/104 (33%), Gaps = 18/104 (17%)
 Frame = +2

Query: 29  SSCKHRVDNHCPTCRQEL---GNIRCLA---------------LEKVAESIQLPCKYQSL 154
           S+C HR    C TC QE    G  +C                 LE     + + C +   
Sbjct: 32  STCGHRF---CDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQVLGLPIRCIHSEE 88

Query: 155 GCTEIHPYQNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSH 286
           GC    P ++   H   C F    CP      L   D+P  + H
Sbjct: 89  GCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQH 132

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>RNF4_RAT (O88846) RING finger protein 4 (SNURF)|
          Length = 194

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 14  GHTICSSCKH---RVDNHCPTCRQELGNIR 94
           GH  CS C     +  N CPTCR+++ + R
Sbjct: 159 GHVFCSQCLRDSLKNANTCPTCRKKINHKR 188

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>RNF4_MOUSE (Q9QZS2) RING finger protein 4|
          Length = 194

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 14  GHTICSSCKH---RVDNHCPTCRQELGNIR 94
           GH  CS C     +  N CPTCR+++ + R
Sbjct: 159 GHVFCSQCLRDSLKNANTCPTCRKKINHKR 188

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>RNF4_HUMAN (P78317) RING finger protein 4|
          Length = 190

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 14  GHTICSSCKH---RVDNHCPTCRQELGNIR 94
           GH  CS C     +  N CPTCR+++ + R
Sbjct: 155 GHVFCSQCLRDSLKNANTCPTCRKKINHKR 184

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>IAP1_NPVAC (P41435) Apoptosis inhibitor 1 (IAP-1)|
          Length = 286

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 23  ICSSCKHRVDNHCPTCRQEL 82
           +C  C   +D  CPTCRQ++
Sbjct: 258 VCVQCYFGLDQKCPTCRQDV 277

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>ISPG_IDILO (Q5QYA9) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 372

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 59  CPTC-RQELGNIRCL-ALEKVAESIQLPCKYQSLGCTEIHPYQNKLKHEEICRFRPYSCP 232
           CP+C RQE   I  + ALE+  E I +P     +GC    P +  + H  +   +  S  
Sbjct: 270 CPSCSRQEFDVINTVNALEERLEDITIPMDVSIIGCVVNGPGEALVSHVGLAGAKNKSGL 329

Query: 233 YAG 241
           Y G
Sbjct: 330 YIG 332

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>SIM2_MOUSE (Q61079) Single-minded homolog 2 (SIM transcription factor) (mSIM)|
          Length = 657

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 418 EVLTKTLEHSEHPCRVFHFVRVGLHVAVVKG 326
           +++ KTL H  H C  FH +R   H+ +VKG
Sbjct: 259 DLIEKTLYHHVHGCDTFH-LRYAHHLLLVKG 288

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>TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-rich motif|
           associated to RING and Traf domains protein 1)
          Length = 470

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 18/104 (17%)
 Frame = +2

Query: 29  SSCKHRVDNHCPTCRQEL---GNIRCLA---------------LEKVAESIQLPCKYQSL 154
           S+C HR   +C  C QE    G  +C                 LE     + + C +   
Sbjct: 32  STCGHR---YCDNCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQVLGLAIRCIHSEE 88

Query: 155 GCTEIHPYQNKLKHEEICRFRPYSCPYAGSECLIAGDVPMLVSH 286
           GC    P ++   H   C F    CP      L   D+P  + H
Sbjct: 89  GCRWSGPLRHLQGHLNTCSFNVVPCPNRCPAKLSRRDLPAHLQH 132

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>SIM1_HUMAN (P81133) Single-minded homolog 1|
          Length = 766

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 418 EVLTKTLEHSEHPCRVFHFVRVGLHVAVVKG 326
           +++ KTL H  H C  FH +R   H+ +VKG
Sbjct: 259 DLIEKTLYHHVHGCDTFH-LRCAHHLLLVKG 288

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>SIM1_MOUSE (Q61045) Single-minded homolog 1 (mSIM1)|
          Length = 765

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 418 EVLTKTLEHSEHPCRVFHFVRVGLHVAVVKG 326
           +++ KTL H  H C  FH +R   H+ +VKG
Sbjct: 259 DLIEKTLYHHVHGCDTFH-LRCAHHLLLVKG 288


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,843,426
Number of Sequences: 219361
Number of extensions: 1705738
Number of successful extensions: 5227
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 4993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result