ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77f02 |
|---|---|
| Clone Library Name | barley_pub |
>HEM3_PEA (Q43082) Porphobilinogen deaminase, chloroplast precursor (EC| 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 369 Score = 57.0 bits (136), Expect = 1e-08 Identities = 27/31 (87%), Positives = 29/31 (93%) Frame = +1 Query: 277 KVSLIRIGTRGSPLALAQAHETRDKLKAAHT 369 K +LIRIGTRGSPLALAQAHETRDKL A+HT Sbjct: 58 KTALIRIGTRGSPLALAQAHETRDKLMASHT 88
>HEM3_ARATH (Q43316) Porphobilinogen deaminase, chloroplast precursor (EC| 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 382 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/30 (73%), Positives = 27/30 (90%) Frame = +1 Query: 277 KVSLIRIGTRGSPLALAQAHETRDKLKAAH 366 + ++IRIGTRGSPLALAQA+ETR+KLK H Sbjct: 71 RTAIIRIGTRGSPLALAQAYETREKLKKKH 100
>HEM3_RHIME (Q92LH7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 47.4 bits (111), Expect = 9e-06 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = +1 Query: 292 RIGTRGSPLALAQAHETRDKLKAAH 366 RIGTRGSPLA+AQ HETRD+L AAH Sbjct: 7 RIGTRGSPLAMAQTHETRDRLAAAH 31
>HEM3_AGRT5 (Q8UC46) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = +1 Query: 292 RIGTRGSPLALAQAHETRDKLKAAH 366 RIGTRGSPLALAQA+ETR +L AAH Sbjct: 7 RIGTRGSPLALAQAYETRSRLMAAH 31
>HEM3_RHILO (Q98EI7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 308 Score = 44.7 bits (104), Expect = 6e-05 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 ++IGTRGSPLALAQAHET+ +L AAH Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAH 30
>HEM3_SHIFL (Q83PH4) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +DKL A+H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDKLMASH 31
>HEM3_ECOLI (P06983) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +DKL A+H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDKLMASH 31
>HEM3_ECOL6 (Q8FBP1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +DKL A+H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDKLMASH 31
>HEM3_ECO57 (Q8XAP3) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +DKL A+H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDKLMASH 31
>HEM3_VIBPA (Q87KI9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 312 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 IRI TR SPLAL QAH +D L+AAH Sbjct: 7 IRIATRKSPLALWQAHFVKDALQAAH 32
>HEM3_BRUSU (Q8FYI6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 314 Score = 35.4 bits (80), Expect = 0.034 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = +1 Query: 277 KVSLIRIGTRGSPLALAQAHETRDKLKAAH 366 K ++IGTRGS LALAQA+ TR L+ AH Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAH 36
>HEM3_BRUME (Q8YJB0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 314 Score = 35.4 bits (80), Expect = 0.034 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = +1 Query: 277 KVSLIRIGTRGSPLALAQAHETRDKLKAAH 366 K ++IGTRGS LALAQA+ TR L+ AH Sbjct: 7 KNGTLKIGTRGSKLALAQAYLTRRLLQEAH 36
>HEM3_SALTY (P0A1Q8) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 34.7 bits (78), Expect = 0.058 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +D L A H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDALMATH 31
>HEM3_SALTI (P0A1Q9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 34.7 bits (78), Expect = 0.058 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH +D L A H Sbjct: 4 NVLRIATRQSPLALWQAHYVKDALMATH 31
>HEM3_ERWCH (P40129) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (Fragment) Length = 89 Score = 33.9 bits (76), Expect = 0.099 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 +++RI TR SPLAL QAH + +L+A H Sbjct: 4 TILRIATRQSPLALWQAHFVQQRLEACH 31
>HEM3_VIBCH (Q9KVM1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 311 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/26 (65%), Positives = 19/26 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 IRI TR SPLAL QA+ +D L AAH Sbjct: 6 IRIATRQSPLALWQANYVKDALMAAH 31
>HEM3_VIBVY (Q7MQC7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 312 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 IRI TR SPLAL QA+ +D L+ AH Sbjct: 7 IRIATRKSPLALWQAYYVKDALQKAH 32
>HEM3_VIBVU (Q8DD85) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 312 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/26 (61%), Positives = 19/26 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 IRI TR SPLAL QA+ +D L+ AH Sbjct: 7 IRIATRKSPLALWQAYYVKDALQKAH 32
>HEM3_YERIN (P30527) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) (Fragment) Length = 183 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKAAH 366 +IRI TR SPLAL QAH + L+A H Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANH 31
>HEM3_COREF (Q8FSF7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 299 Score = 32.0 bits (71), Expect = 0.38 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLK 357 +RIGTRGS LA QA RD+LK Sbjct: 3 LRIGTRGSKLATTQAGHMRDRLK 25
>HEM3_YERPS (Q66G00) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKAAH 366 +IRI TR SPLAL QAH + L+A H Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANH 31
>HEM3_YERPE (P46355) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKAAH 366 +IRI TR SPLAL QAH + L+A H Sbjct: 5 IIRIATRQSPLALWQAHYVQHLLQANH 31
>HEM3_METJA (Q57989) Probable porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 292 Score = 31.2 bits (69), Expect = 0.64 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLK 357 +IRIGTRGS LAL QA++ + LK Sbjct: 1 MIRIGTRGSKLALYQANKVAELLK 24
>HEM3_METCA (Q602K3) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 322 Score = 31.2 bits (69), Expect = 0.64 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 +RI TR SPLAL QA +L+AAH Sbjct: 18 LRIATRKSPLALWQAEYVASRLRAAH 43
>HEM3_NOCFA (Q5YP70) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 346 Score = 31.2 bits (69), Expect = 0.64 Identities = 16/25 (64%), Positives = 18/25 (72%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAA 363 +RIGTRGS LA+ QA RD L AA Sbjct: 10 LRIGTRGSLLAMTQAGTVRDALIAA 34
>HEM3_GLOVI (Q7NGF7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 328 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 Query: 295 IGTRGSPLALAQAHETRDKLKAAH 366 IG+R S LAL Q H RD+L+ AH Sbjct: 7 IGSRDSQLALVQTHWVRDELQRAH 30
>HEM3_ACIAD (Q6FFA9) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 311 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 ++I TR SPLAL QA RD+L+A + Sbjct: 9 LKIATRQSPLALWQAEHIRDRLQALY 34
>HEM3_PROMI (Q59684) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 Query: 283 SLIRIGTRGSPLALAQAHETRDKLKAAH 366 S IRI TR SPLA+ QA +++L+ AH Sbjct: 4 STIRIATRQSPLAMWQALYVKEQLQIAH 31
>HEM32_STRCO (Q9KY00) Porphobilinogen deaminase 2 (EC 2.5.1.61) (PBG 2)| (Hydroxymethylbilane synthase 2) (HMBS 2) (Pre-uroporphyrinogen synthase 2) Length = 313 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKAAH 366 LIRI +R SP+ALAQ R +L A H Sbjct: 8 LIRIVSRDSPMALAQVERVRAELAALH 34
>HEM32_STRAW (Q82P95) Porphobilinogen deaminase 2 (EC 2.5.1.61) (PBG 2)| (Hydroxymethylbilane synthase 2) (HMBS 2) (Pre-uroporphyrinogen synthase 2) Length = 314 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 280 VSLIRIGTRGSPLALAQAHETRDKLKAAH 366 + LIRI +R SP+ALAQ R +L A H Sbjct: 7 LELIRIVSRDSPMALAQVARVRAELAALH 35
>HEM3_CORGL (Q8NT90) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 302 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLK 357 ++IGTRGS LA QA RD+LK Sbjct: 3 LKIGTRGSKLATTQAGTIRDQLK 25
>HEM3_MYCTU (P64336) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKA 360 +IRIGTRGS LA QA RD L A Sbjct: 1 MIRIGTRGSLLATTQAATVRDALIA 25
>HEM3_MYCBO (P64337) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKA 360 +IRIGTRGS LA QA RD L A Sbjct: 1 MIRIGTRGSLLATTQAATVRDALIA 25
>HEM3_MYCPA (Q73SS0) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKA 360 +IRIGTRGS LA QA RD L A Sbjct: 1 MIRIGTRGSLLATTQAGGVRDALIA 25
>HEM3_MYCLE (Q49808) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 315 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKLKA 360 +IRIGTRGS LA QA RD L A Sbjct: 1 MIRIGTRGSLLATTQAALVRDALIA 25
>HEM3_ARCFU (O29026) Probable porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 289 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 295 IGTRGSPLALAQAHETRDKLK 357 +GTRGS LALAQ ++ ++LK Sbjct: 5 VGTRGSKLALAQTNKVAERLK 25
>HEM3_BLOFL (Q7VRM4) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 311 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 277 KVSLIRIGTRGSPLALAQAHETRDKLKAAH 366 + ++RI TR SPLA+ QA +KLK H Sbjct: 2 QAKILRIATRKSPLAICQACYVCNKLKHYH 31
>HEM3_PSEPK (Q88RE5) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAHT 369 IRI TR S LAL QA + +L+ AHT Sbjct: 6 IRIATRKSALALWQAEYVKARLEQAHT 32
>HEM3_LEGPL (Q5WT65) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKL 354 +IRI TR SPLAL QA+ R+ L Sbjct: 5 IIRIATRQSPLALWQANHVREML 27
>HEM3_LEGPH (Q5ZRY6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKL 354 +IRI TR SPLAL QA+ R+ L Sbjct: 5 IIRIATRQSPLALWQANHVREML 27
>HEM3_LEGPA (Q5X1F2) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 309 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 286 LIRIGTRGSPLALAQAHETRDKL 354 +IRI TR SPLAL QA+ R+ L Sbjct: 5 IIRIATRQSPLALWQANHVREML 27
>HEM3_WOLSU (Q7M8L2) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 311 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 I IGTRGS LAL QA + +L+ AH Sbjct: 4 IIIGTRGSVLALWQAEYVKAELERAH 29
>HEM3_FUSNN (Q8RFP5) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 298 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/23 (60%), Positives = 19/23 (82%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLK 357 I IG+RGS LALAQA+ +D+L+ Sbjct: 5 IIIGSRGSILALAQANLVKDRLQ 27
>HEM3_MANSM (Q65VX7) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 310 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 ++I TR SPLAL QA+ +D+L A + Sbjct: 7 LKIATRQSPLALWQANYVKDRLTALY 32
>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 329 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 289 IRIGTRGSPLALAQ 330 +R+GTRGSPLA+AQ Sbjct: 15 LRVGTRGSPLAVAQ 28
>HEM3_PHOLL (Q7MYN1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLKAAH 366 IRI TR SPLA+ QA + KL+ H Sbjct: 6 IRIATRQSPLAMWQALYVQQKLQQCH 31
>HEM3_PICTO (Q6L2G8) Probable porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 282 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKL 354 IRIGTR S LA+ QA +D+L Sbjct: 3 IRIGTRSSKLAMIQAMMVKDRL 24
>HEM3_HALSA (Q9HMY5) Probable porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 396 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 Query: 289 IRIGTRGSPLALAQAHETRDKLK 357 IR+ TRGS LAL QA E D L+ Sbjct: 6 IRLATRGSDLALRQAGEVVDTLE 28 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,139,307 Number of Sequences: 219361 Number of extensions: 178800 Number of successful extensions: 338 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 338 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
