ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77e08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 157 bits (79), Expect = 4e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 181 gtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtcggacgc 240 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 90322 gtgcacgtacacggtgcgggtgaagacgagctgcgcgtcgccggcgcggacggcggacat 90381 Query: 241 ggtcagcgtggcgttcggcgacgcgtaccggaacgaggcgtacggcgcgcg 291 |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 90382 tgtcagcgtcgcgttcggggacgcgtaccggaacgaggcgtacggcgcgcg 90432 Score = 129 bits (65), Expect = 8e-27 Identities = 92/101 (91%) Strand = Plus / Plus Query: 332 ttccgcgtctccggggtgtgcgggtacggcgtctgctacctctacctccgccgcgccggc 391 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90485 ttccgcgtcggcgggcagtgcgggtacggcgtctgctacctctacctccgccgcgccggc 90544 Query: 392 cgcgacggctgggcgcccgagtgggtccaggtcgtcgagcc 432 |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 90545 cgcgacgggtgggcgccggagtgggtgcaggtgttcgagcc 90585
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 4e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 181 gtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtcggacgc 240 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 4203843 gtgcacgtacacggtgcgggtgaagacgagctgcgcgtcgccggcgcggacggcggacat 4203902 Query: 241 ggtcagcgtggcgttcggcgacgcgtaccggaacgaggcgtacggcgcgcg 291 |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 4203903 tgtcagcgtcgcgttcggggacgcgtaccggaacgaggcgtacggcgcgcg 4203953 Score = 129 bits (65), Expect = 8e-27 Identities = 92/101 (91%) Strand = Plus / Plus Query: 332 ttccgcgtctccggggtgtgcgggtacggcgtctgctacctctacctccgccgcgccggc 391 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4204006 ttccgcgtcggcgggcagtgcgggtacggcgtctgctacctctacctccgccgcgccggc 4204065 Query: 392 cgcgacggctgggcgcccgagtgggtccaggtcgtcgagcc 432 |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 4204066 cgcgacgggtgggcgccggagtgggtgcaggtgttcgagcc 4204106 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 19932114 tgctgctgctcgtcgccgtct 19932134 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcgtcgccggcaatggcggg 75 |||||||||||||||||||| Sbjct: 3010482 tcgtcgccggcaatggcggg 3010463
>dbj|AK062702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-B03, full insert sequence Length = 715 Score = 157 bits (79), Expect = 4e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 181 gtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtcggacgc 240 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 166 gtgcacgtacacggtgcgggtgaagacgagctgcgcgtcgccggcgcggacggcggacat 225 Query: 241 ggtcagcgtggcgttcggcgacgcgtaccggaacgaggcgtacggcgcgcg 291 |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 226 tgtcagcgtcgcgttcggggacgcgtaccggaacgaggcgtacggcgcgcg 276 Score = 129 bits (65), Expect = 8e-27 Identities = 92/101 (91%) Strand = Plus / Plus Query: 332 ttccgcgtctccggggtgtgcgggtacggcgtctgctacctctacctccgccgcgccggc 391 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ttccgcgtcggcgggcagtgcgggtacggcgtctgctacctctacctccgccgcgccggc 388 Query: 392 cgcgacggctgggcgcccgagtgggtccaggtcgtcgagcc 432 |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 389 cgcgacgggtgggcgccggagtgggtgcaggtgttcgagcc 429
>ref|NM_191576.2| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 175 gcggacgtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtc 234 |||||||||| |||||||||| || | ||||||||||||||||||||| ||| ||||| Sbjct: 225 gcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtc 284 Query: 235 ggacgcggtcagcgtggcgttcggcgacgcgtaccggaacgagg 278 ||||||||||||| | |||||||| ||||| ||||| ||||||| Sbjct: 285 ggacgcggtcagcctcgcgttcggggacgcctaccgcaacgagg 328 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 308 ttcgagcggtgcggcaccgacaccttccgcgtctccggggtgtgcgggtacggcgtctgc 367 ||||||||||||| ||||||||| |||||||| || ||||| |||||||||||| Sbjct: 388 ttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgc 447 Query: 368 tacctctacctccgccgcgccggccgcgacggctgggcgcccgagtgggtc 418 |||||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 448 tacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtc 498
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 175 gcggacgtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtc 234 |||||||||| |||||||||| || | ||||||||||||||||||||| ||| ||||| Sbjct: 3735184 gcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtc 3735243 Query: 235 ggacgcggtcagcgtggcgttcggcgacgcgtaccggaacgagg 278 ||||||||||||| | |||||||| ||||| ||||| ||||||| Sbjct: 3735244 ggacgcggtcagcctcgcgttcggggacgcctaccgcaacgagg 3735287 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 308 ttcgagcggtgcggcaccgacaccttccgcgtctccggggtgtgcgggtacggcgtctgc 367 ||||||||||||| ||||||||| |||||||| || ||||| |||||||||||| Sbjct: 3735347 ttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgc 3735406 Query: 368 tacctctacctccgccgcgccggccgcgacggctgggcgcccgagtgggtc 418 |||||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 3735407 tacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtc 3735457
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 175 gcggacgtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtc 234 |||||||||| |||||||||| || | ||||||||||||||||||||| ||| ||||| Sbjct: 8726 gcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtc 8785 Query: 235 ggacgcggtcagcgtggcgttcggcgacgcgtaccggaacgagg 278 ||||||||||||| | |||||||| ||||| ||||| ||||||| Sbjct: 8786 ggacgcggtcagcctcgcgttcggggacgcctaccgcaacgagg 8829 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 308 ttcgagcggtgcggcaccgacaccttccgcgtctccggggtgtgcgggtacggcgtctgc 367 ||||||||||||| ||||||||| |||||||| || ||||| |||||||||||| Sbjct: 8889 ttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgc 8948 Query: 368 tacctctacctccgccgcgccggccgcgacggctgggcgcccgagtgggtc 418 |||||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 8949 tacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtc 8999
>dbj|AK067273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J12, full insert sequence Length = 823 Score = 103 bits (52), Expect = 5e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 175 gcggacgtgcacgtacacggtgaaggtgaagacgagctgcgcgtcgccggcgcggacgtc 234 |||||||||| |||||||||| || | ||||||||||||||||||||| ||| ||||| Sbjct: 225 gcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtcgccgtggcgcacgtc 284 Query: 235 ggacgcggtcagcgtggcgttcggcgacgcgtaccggaacgagg 278 ||||||||||||| | |||||||| ||||| ||||| ||||||| Sbjct: 285 ggacgcggtcagcctcgcgttcggggacgcctaccgcaacgagg 328 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 308 ttcgagcggtgcggcaccgacaccttccgcgtctccggggtgtgcgggtacggcgtctgc 367 ||||||||||||| ||||||||| |||||||| || ||||| |||||||||||| Sbjct: 388 ttcgagcggtgcgccaccgacacgttccgcgtggggggcccctgcggctacggcgtctgc 447 Query: 368 tacctctacctccgccgcgccggccgcgacggctgggcgcccgagtgggtc 418 |||||||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct: 448 tacctctacctccgccgctccggccgcgacggctggacgccgcagtgggtc 498
>gb|AY019997.1| Oryza sativa microsatellite MRG2322 containing (CT)X14, closest to marker R2232, genomic sequence Length = 228 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 181 gtgcacgtacacggtgaaggtgaagacgagct 212 |||||||||||||||| |||||||||||||| Sbjct: 197 gtgcacgtacacggtgcgggtgaagacgagct 228
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 gctcctgctgctgctcgtcgccg 131 ||||||||||||||||||||||| Sbjct: 2532911 gctcctgctgctgctcgtcgccg 2532933 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 945917 gccgcgccggccgcgacggc 945936
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccgtc 133 |||||||||||||||||||||| Sbjct: 301157 cctgctgctgctcgtcgccgtc 301136 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tgctgctgctcgtcgccgtc 133 |||||||||||||||||||| Sbjct: 2530938 tgctgctgctcgtcgccgtc 2530957 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 acctccgccgcgccggccgc 394 |||||||||||||||||||| Sbjct: 1587252 acctccgccgcgccggccgc 1587271
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 ccgccgcgccggccgcgacggc 400 |||||||||||||||||||||| Sbjct: 398170 ccgccgcgccggccgcgacggc 398149
>ref|XM_538324.2| PREDICTED: Canis familiaris similar to Cadherin EGF LAG seven-pass G-type receptor 1 precursor (LOC481203), mRNA Length = 9309 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 ctcctgctgctgctcgtcgccg 131 |||||||||||||||||||||| Sbjct: 8275 ctcctgctgctgctcgtcgccg 8296
>gb|AF003142.1| Caenorhabditis elegans cosmid F57C9, complete sequence Length = 32048 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gctgctcgtcgccgtcttcgga 139 |||||||||||||||||||||| Sbjct: 29225 gctgctcgtcgccgtcttcgga 29204
>gb|U97192.2| Caenorhabditis elegans cosmid C01F4, complete sequence Length = 17773 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 gctgctcgtcgccgtcttcgga 139 |||||||||||||||||||||| Sbjct: 177 gctgctcgtcgccgtcttcgga 156
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccgtc 133 |||||||||||||||||||||| Sbjct: 78440 cctgctgctgctcgtcgccgtc 78419 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tgctgctgctcgtcgccgtc 133 |||||||||||||||||||| Sbjct: 1851690 tgctgctgctcgtcgccgtc 1851671
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 cctcgtcgccggcaatggcggg 75 |||||||||||||||||||||| Sbjct: 2293308 cctcgtcgccggcaatggcggg 2293287 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 cgtcttcggaggcttctcccccga 153 ||||||||| |||||||||||||| Sbjct: 4364182 cgtcttcggcggcttctcccccga 4364159
>ref|NM_059064.4| Caenorhabditis elegans C01F4.2a (C01F4.2) mRNA, complete cds Length = 3246 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 gctgctcgtcgccgtcttcgga 139 |||||||||||||||||||||| Sbjct: 2875 gctgctcgtcgccgtcttcgga 2896
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 ggtccaggtcgtcgagccgggc 436 |||||||||||||||||||||| Sbjct: 5874729 ggtccaggtcgtcgagccgggc 5874708
>emb|AL645789.14| Zebrafish DNA sequence from clone RP71-11B17 in linkage group 22, complete sequence Length = 167635 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 gcctctcgctcctgctgctgct 123 |||||||||||||||||||||| Sbjct: 3080 gcctctcgctcctgctgctgct 3101
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccgtc 133 |||||||||||||||||||||| Sbjct: 75943 cctgctgctgctcgtcgccgtc 75922 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 cgccggcgcggacgtcggacgcgg 242 |||||||||||||||||| ||||| Sbjct: 2574737 cgccggcgcggacgtcgggcgcgg 2574760
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccgtcttcg 137 |||||||||||||||||||| ||||| Sbjct: 1597966 cctgctgctgctcgtcgccgccttcg 1597941
>ref|XM_482371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgctcctgctgctgctcgtcgccgt 132 |||| |||||||||||||||||||| Sbjct: 23 cgctgctgctgctgctcgtcgccgt 47
>ref|XM_464114.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1987 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 165 cctccgccgcgccggccgcga 145 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 126 cctccgccgcgccggccgcga 106
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tcctgctgctgctcgtcgccg 131 ||||||||||||||||||||| Sbjct: 2055251 tcctgctgctgctcgtcgccg 2055271 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccgt 132 ||||||||||||||||||||| Sbjct: 703748 cctgctgctgctcgtcgccgt 703728
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 73278 tgctgctgctcgtcgccgtct 73298
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 cgacagccgcaccgaggcggc 171 ||||||||||||||||||||| Sbjct: 2467170 cgacagccgcaccgaggcggc 2467150 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 cgtcttcggaggcttctcccccga 153 ||||||||| |||||||||||||| Sbjct: 1908445 cgtcttcggcggcttctcccccga 1908468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccgccgcgccggccgcgacg 398 |||||||||||||||||||| Sbjct: 1770059 ccgccgcgccggccgcgacg 1770078
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 21244891 tgctgctgctcgtcgccgtct 21244871 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 20641185 cctgctgctgctcgtcgccg 20641204
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgctcctgctgctgctcgtcgccgt 132 |||| |||||||||||||||||||| Sbjct: 19676155 cgctgctgctgctgctcgtcgccgt 19676179
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 22431585 cctccgccgcgccggccgcga 22431605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 2325576 cctccgccgcgccggccgcga 2325556 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 2325537 cctccgccgcgccggccgcga 2325517 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 acctccgccgcgccggccgcgacg 398 |||||||||||||| ||||||||| Sbjct: 24769418 acctccgccgcgcccgccgcgacg 24769441 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgcgcgcctcccgcccggcg 305 |||||||||||||||||||| Sbjct: 1235577 cgcgcgcctcccgcccggcg 1235596
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 cgcgtcgccggcgcggacgtc 234 ||||||||||||||||||||| Sbjct: 1422612 cgcgtcgccggcgcggacgtc 1422632 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 gcgcgtcgccggcgcggacgtcgg 236 ||||| |||||||||||||||||| Sbjct: 1354372 gcgcgccgccggcgcggacgtcgg 1354349 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 1338921 cctccgccgcgccggccgcg 1338902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 978317 gccgcgccggccgcgacggc 978336
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016D04 Length = 147313 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 1941 cctccgccgcgccggccgcga 1961
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 87804 cctccgccgcgccggccgcga 87824
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgctcctgctgctgctcgtcgccgt 132 |||| |||||||||||||||||||| Sbjct: 5106 cgctgctgctgctgctcgtcgccgt 5130
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 61653 cctccgccgcgccggccgcga 61633 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 61614 cctccgccgcgccggccgcga 61594
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 112525 cctccgccgcgccggccgcga 112505 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 112486 cctccgccgcgccggccgcga 112466
>dbj|AK121270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105L07, full insert sequence Length = 2719 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 853 tgctgctgctcgtcgccgtct 873
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 cgctcctgctgctgctcgtcgccgt 132 |||| |||||||||||||||||||| Sbjct: 151715 cgctgctgctgctgctcgtcgccgt 151739
>dbj|AK106722.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G09, full insert sequence Length = 1987 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 165 cctccgccgcgccggccgcga 145 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 126 cctccgccgcgccggccgcga 106
>dbj|AK071553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105G15, full insert sequence Length = 1526 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcga 396 ||||||||||||||||||||| Sbjct: 115 cctccgccgcgccggccgcga 95
>dbj|AK069882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P09, full insert sequence Length = 2796 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 943 tgctgctgctcgtcgccgtct 963
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tgctgctgctcgtcgccgtct 134 ||||||||||||||||||||| Sbjct: 115648 tgctgctgctcgtcgccgtct 115628
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 90792 cctccgccgcgccggccgcg 90773
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 cggcgcgcgcctcccgcccggcgc 306 |||||||||||||| ||||||||| Sbjct: 3499866 cggcgcgcgcctccggcccggcgc 3499889 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 1514360 gccgcgccggccgcgacggc 1514341
>ref|XM_466807.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 acctccgccgcgccggccgcgacg 398 |||||||||||||| ||||||||| Sbjct: 2152 acctccgccgcgcccgccgcgacg 2129
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ccccatcccaacgtcctcgc 54 |||||||||||||||||||| Sbjct: 608588 ccccatcccaacgtcctcgc 608569
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 acctccgccgcgccggccgc 394 |||||||||||||||||||| Sbjct: 1878291 acctccgccgcgccggccgc 1878272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tgctgctgctcgtcgccgtc 133 |||||||||||||||||||| Sbjct: 1034857 tgctgctgctcgtcgccgtc 1034838
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcgtcgccggcaatggcggg 75 |||||||||||||||||||| Sbjct: 104498 tcgtcgccggcaatggcggg 104479
>gb|BC078077.1| Xenopus laevis MGC82985 protein, mRNA (cDNA clone MGC:82985 IMAGE:5515963), complete cds Length = 2284 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 cctctcgctcctgctgctgctcgt 126 ||||||||| |||||||||||||| Sbjct: 26 cctctcgctgctgctgctgctcgt 49
>gb|AY492240.1| Corynebacterium renale strain CIP 103421 RpoB (rpoB) gene, partial cds Length = 3442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gtcgccggcgcggacgtcgg 236 |||||||||||||||||||| Sbjct: 2339 gtcgccggcgcggacgtcgg 2320
>gb|AY659116.1| Synthetic construct Peudomonas aeruginosa clone FLH037633.01F PA5206 gene, partial cds Length = 1155 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ggcgttcggcgacgcgtacc 269 |||||||||||||||||||| Sbjct: 946 ggcgttcggcgacgcgtacc 927
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 935595 cctccgccgcgccggccgcg 935576
>ref|XM_572358.1| Cryptococcus neoformans var. neoformans JEC21 arylformamidase (CNH01830) partial mRNA Length = 1433 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ccccatcccaacgtcctcgc 54 |||||||||||||||||||| Sbjct: 208 ccccatcccaacgtcctcgc 227
>ref|XM_846588.1| PREDICTED: Canis familiaris similar to Protein C14orf127 homolog (LOC609340), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccggccgcgacggct 401 |||||||||||||||||||| Sbjct: 117 ccgcgccggccgcgacggct 136
>emb|AL591742.7| Human DNA sequence from clone RP4-590F24 on chromosome 1 Contains the 3' end of the gene for HNOEL-iso protein (HNOEL-iso) and a ribosomal protein L13a (RPL13A) pseudogene, complete sequence Length = 86049 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cccttcccacatccccatcc 42 |||||||||||||||||||| Sbjct: 3833 cccttcccacatccccatcc 3814
>ref|XM_504478.1| Yarrowia lipolytica CLIB122, YALI0E27715g predicted mRNA Length = 1659 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 tctcgctcctgctgctgctcgtcgccgt 132 ||||||||||||||||||| ||| |||| Sbjct: 1208 tctcgctcctgctgctgcttgtcaccgt 1181
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 gctgctcgtcgccgtcttcggaggcttc 145 |||||||| ||||| ||||||||||||| Sbjct: 1255547 gctgctcgccgccgccttcggaggcttc 1255520
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 4884144 gccgcgccggccgcgacggc 4884163
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tcctgctgctgctcgtcgcc 130 |||||||||||||||||||| Sbjct: 2238640 tcctgctgctgctcgtcgcc 2238621
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cagcgtggcgttcggcgacg 263 |||||||||||||||||||| Sbjct: 256322 cagcgtggcgttcggcgacg 256303
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cagcgtggcgttcggcgacg 263 |||||||||||||||||||| Sbjct: 47360 cagcgtggcgttcggcgacg 47341
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cagcgtggcgttcggcgacg 263 |||||||||||||||||||| Sbjct: 109815 cagcgtggcgttcggcgacg 109796
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctctacctccgccgcgccg 389 |||||||||||||||||||| Sbjct: 57250 cctctacctccgccgcgccg 57231
>ref|NM_001000537.1| Rattus norvegicus olfactory receptor 1667 (predicted) (Olr1667_predicted), mRNA Length = 945 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 gctcctgctgctgctcgtcgccgtcttc 136 ||||| |||||||||| ||||||||||| Sbjct: 66 gctccagctgctgctcttcgccgtcttc 93
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gctgcgcgtcgccggcgcgg 229 |||||||||||||||||||| Sbjct: 2053246 gctgcgcgtcgccggcgcgg 2053265
>gb|AY028431.1| Burkholderia cepacia genomovar III putative type III secretion gene cluster, complete sequence Length = 34600 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 3773 cctgctgctgctcgtcgccg 3754
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 5322045 gccgcgccggccgcgacggc 5322064
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cctctacctccgccgcgccg 389 |||||||||||||||||||| Sbjct: 30581542 cctctacctccgccgcgccg 30581523
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 935593 cctccgccgcgccggccgcg 935574
>gb|AE004933.1| Pseudomonas aeruginosa PAO1, section 494 of 529 of the complete genome Length = 11222 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ggcgttcggcgacgcgtacc 269 |||||||||||||||||||| Sbjct: 8101 ggcgttcggcgacgcgtacc 8120
>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence Length = 88203 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcctctcgctcctgctgctg 121 |||||||||||||||||||| Sbjct: 62652 gcctctcgctcctgctgctg 62633
>gb|AC055858.18| Homo sapiens chromosome 17, clone RP11-682M7, complete sequence Length = 167395 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 ccttcccacatccccatccc 43 |||||||||||||||||||| Sbjct: 30086 ccttcccacatccccatccc 30105
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 34796 cctgctgctgctcgtcgccg 34815
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 106843 cctgctgctgctcgtcgccg 106862
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcgcgtcgccggcgcggacg 232 |||||||||||||||||||| Sbjct: 4179124 gcgcgtcgccggcgcggacg 4179143
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgcgcgcctcccgcccggcg 305 |||||||||||||||||||| Sbjct: 66668 cgcgcgcctcccgcccggcg 66687
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 acctccgccgcgccggccgcgacg 398 |||||||||||||| ||||||||| Sbjct: 69066 acctccgccgcgcccgccgcgacg 69089
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 cgcgcgcctcccgcccggcg 305 |||||||||||||||||||| Sbjct: 9606 cgcgcgcctcccgcccggcg 9625
>gb|AY327402.2| Choristoneura fumiferana defective nucleopolyhedrovirus complete genome Length = 131160 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ctgctgctgctcgtcgccgt 132 |||||||||||||||||||| Sbjct: 14195 ctgctgctgctcgtcgccgt 14176
>dbj|AK121611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043A05, full insert sequence Length = 5680 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 3877 cctccgccgcgccggccgcg 3858
>dbj|AK100308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I11, full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 acctccgccgcgccggccgcgacg 398 |||||||||||||| ||||||||| Sbjct: 2152 acctccgccgcgcccgccgcgacg 2129
>dbj|AK100255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F22, full insert sequence Length = 1986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cctccgccgcgccggccgcg 395 |||||||||||||||||||| Sbjct: 144 cctccgccgcgccggccgcg 125
>dbj|AK073741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A21, full insert sequence Length = 1444 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 86 cctgctgctgctcgtcgccg 105
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 3246419 gccgcgccggccgcgacggc 3246400
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cggacgcggtcagcgtggcg 253 |||||||||||||||||||| Sbjct: 4470796 cggacgcggtcagcgtggcg 4470777 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 3169084 gccgcgccggccgcgacggc 3169103 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccgcgccggccgcgacggc 400 |||||||||||||||||||| Sbjct: 499599 gccgcgccggccgcgacggc 499618
>gb|AC165443.5| Mus musculus BAC clone RP23-95F15 from chromosome 1, complete sequence Length = 174254 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gcctctcgctcctgctgctg 121 |||||||||||||||||||| Sbjct: 93215 gcctctcgctcctgctgctg 93234
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 tctcgctcctgctgctgctcgtcgccgt 132 ||||||||||||||||||| ||| |||| Sbjct: 3273132 tctcgctcctgctgctgcttgtcaccgt 3273159
>dbj|D30815.1|STMCYP450 Streptomyces carbophilus gene for cytochrome P-450sca-2, complete cds Length = 1274 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctgctgctgctcgtcgccg 131 |||||||||||||||||||| Sbjct: 760 cctgctgctgctcgtcgccg 779 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,811,342 Number of Sequences: 3902068 Number of extensions: 2811342 Number of successful extensions: 81020 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75432 Number of HSP's gapped (non-prelim): 5588 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
