Clone Information

BLAST Search Result

Clone Name	bast77e01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)	33	0.29
2	HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (...	33	0.49
3	RGL2_HUMAN (O15211) Ral guanine nucleotide dissociation stimulat...	32	0.83
4	Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c	31	1.4
5	Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285	31	1.4
6	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	30	2.4
7	ZRAP_DESVH (Q725P0) Zinc resistance-associated protein homolog p...	30	2.4
8	SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysi...	30	2.4
9	RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulat...	30	2.4
10	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	30	2.4
11	GAR1_YEAST (P28007) H/ACA ribonucleoprotein complex subunit 1 (s...	30	2.4
12	FOXL2_HUMAN (P58012) Forkhead box protein L2	30	3.2
13	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	30	3.2
14	ZCHC8_MOUSE (Q9CYA6) Zinc finger CCHC domain-containing protein 8	30	3.2
15	NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform pre...	30	4.1
16	WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)	30	4.1
17	MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc an...	30	4.1
18	MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc an...	30	4.1
19	SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-li...	30	4.1
20	WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 ...	29	5.4
21	CCNK_MOUSE (O88874) Cyclin-K	29	5.4
22	FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related p...	29	5.4
23	CL46_BOVIN (Q8MHZ9) Collectin-46 precursor (CL-46) (46 kDa colle...	29	5.4
24	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	26	6.7
25	SMAD6_HUMAN (O43541) Mothers against decapentaplegic homolog 6 (...	29	7.1
26	AVEN_MOUSE (Q9D9K3) Cell death regulator Aven	29	7.1
27	NRG3_MOUSE (O35181) Pro-neuregulin-3, membrane-bound isoform pre...	29	7.1
28	ZN499_HUMAN (Q96K62) Zinc finger protein 499	29	7.1
29	HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1	28	9.2
30	WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)	28	9.2
31	WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)	28	9.2
32	WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem...	28	9.2
33	FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 pre...	28	9.2
34	COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor	28	9.2
35	FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precur...	28	9.2
36	CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog	28	9.2
37	ZCHC8_PONPY (Q5R789) Zinc finger CCHC domain-containing protein 8	28	9.2
38	Y911_CAUCR (P33976) Hypothetical protein CC0911	28	9.2
39	ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (...	28	9.2
40	P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor ...	28	9.2
41	VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like prote...	28	9.2

>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)|
          Length = 262

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 9   PPRFHP-LPLFSLTLAAARPPIEPSGAPQRPPTVASPSFP 125
           PP F+P  P+    +   +PP  P   P  PP V+ PS P
Sbjct: 176 PPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVVSGPSAP 215

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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -3

Query: 145 RGHMAPVGKEGLATVGGRCGAPDGSMGGRAAASV----RENRGSGWKRGG 8
           RG   P G+ G +  G   G P GS GGR   +     R +RGS   RGG
Sbjct: 518 RGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGNRGG 567

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>RGL2_HUMAN (O15211) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 777

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = +1

Query: 19  STHFPCFPSHWRRLGPPSSHPAPHNGHR 102
           S H P  PSH   L PP+S P P  GHR
Sbjct: 591 SLHSPADPSH---LSPPASSPRPSRGHR 615

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>Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c|
          Length = 992

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 54  AARPPIEPSGAPQRPPTVASPSFPTGAM 137
           AA PP  P+  PQ PP  A+P  P GA+
Sbjct: 916 AANPP-PPASGPQPPPVTAAPPVPVGAV 942

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>Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285|
          Length = 992

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 54  AARPPIEPSGAPQRPPTVASPSFPTGAM 137
           AA PP  P+  PQ PP  A+P  P GA+
Sbjct: 916 AANPP-PPASGPQPPPVTAAPPVPVGAV 942

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = +3

Query: 3   HSPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASPSFP 125
           HSPP  H  P         RPP    G P  PPT  SP  P
Sbjct: 579 HSPPPPHRQP---------RPPTPTYGQPPSPPTTYSPPSP 610



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 3   HSPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASP 116
           H+PP   P PL  L  +  R P  P+ +P  P    SP
Sbjct: 239 HAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSP 276

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>ZRAP_DESVH (Q725P0) Zinc resistance-associated protein homolog precursor|
          Length = 173

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 139 HMAPVGKEGLATVGGRCGAPDGSMGGRAAASVRENRGSGWKRG 11
           H A +G  G+  +GG CG   G  GG  +  ++ + G G  RG
Sbjct: 129 HFATMGHRGMGGMGGGCGMM-GGKGGMGSGMMQMHDGEGPHRG 170

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>SETB1_MOUSE (O88974) Histone-lysine N-methyltransferase, H3 lysine-9 specific 4|
           (EC 2.1.1.43) (Histone H3-K9 methyltransferase 4)
           (H3-K9-HMTase 4) (SET domain bifurcated 1)
           (ERG-associated protein with SET domain) (ESET)
          Length = 1307

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 24  PLPLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGAMWP 143
           PL   + T A+A PP+ P   P  PPT   P  P G + P
Sbjct: 528 PLASVTSTPASAAPPVPP--VPPGPPTPPGPPAPPGPLAP 565

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>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 19  STHFPCFPSHWRRLGPPSSHPAPHNGHR 102
           S H P  P H   L PP+S P P  GHR
Sbjct: 591 SLHSPADPGH---LSPPASSPRPSRGHR 615

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 63  PPIEPSGAPQRPPTVASPSFPTGA 134
           PP+ PS AP  PP+ A PS P+ A
Sbjct: 209 PPVPPSPAPPSPPSPAPPSPPSPA 232

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>GAR1_YEAST (P28007) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 205

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = -3

Query: 133 APVGKEGLATVGGRCGAPDGSMGGRAAASVRENRGSGWKRGG 8
           AP G+ G +   GR G+  G  GGR  +S R  RG    RGG
Sbjct: 143 APGGRGGASM--GRGGSRGGFRGGRGGSSFRGGRGGSSFRGG 182

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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 9   PPRFHPLPLFSLTLAAARPPIEP--SGAPQRPPTVASPSFPTGAMWP 143
           PP  HP P      AAA PP  P   GA   PP   SP+ P  A  P
Sbjct: 287 PPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPP 333

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 9   PPRFHPLPLFSLTLAAARPPIEP--SGAPQRPPTVASPSFPTGAMWP 143
           PP  HP P      AAA PP  P   GA   PP   SP+ P  A  P
Sbjct: 286 PPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPP 332

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>ZCHC8_MOUSE (Q9CYA6) Zinc finger CCHC domain-containing protein 8|
          Length = 709

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 12  PRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVAS 113
           P+  P PLF+  L    PP+ PS +PQ  P  ++
Sbjct: 479 PQGTPPPLFTPPLPKGTPPLTPSDSPQARPAASA 512

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>NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform precursor|
           (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)]
          Length = 720

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  PLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGA 134
           P FS +   +RPP+     P  P T A PS+PT A
Sbjct: 199 PFFSSSTLGSRPPV-----PGTPSTQAMPSWPTAA 228

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>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)|
          Length = 640

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASP 116
           +PP   P PL        RPP  PSG P  PP  A P
Sbjct: 369 APPITGPPPLGPPPAPPMRPPGPPSGPPPGPPPGAPP 405

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>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 591

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPP 101
           SP    PLP   LT+A   P ++P  APQ+PP
Sbjct: 164 SPKPLQPLPAPILTIAP-HPGVQPQLAPQQPP 194

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>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 582

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPP 101
           SP    PLP   LT+A   P ++P  APQ+PP
Sbjct: 162 SPKPLQPLPTPVLTIAP-HPGVQPQLAPQQPP 192

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>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +3

Query: 15  RFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGAMWPLRTAIGHLDXG 176
           R  P PL S +L+   PP+ P  AP  PP    P  P G     R A+  L  G
Sbjct: 233 RTPPQPLGSHSLSG-NPPLTPFTAPSMPPPATFPGAPHG-----RPAVSGLPYG 280

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>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding|
           protein SNP70) (Npw38-binding protein) (NpwBP)
          Length = 641

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGAMWPLRTAIGHL 167
           +PP   P PL        RPP  P+G P  PP  A P      M  LR  +  L
Sbjct: 404 APPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRL 457

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>CCNK_MOUSE (O88874) Cyclin-K|
          Length = 554

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 9   PPRFHPLPLFSLTLAAARPP-IEPSGAPQRPPTVASPSFP 125
           PP  HP P   L  A+  PP + P G P  PP +  P  P
Sbjct: 505 PP--HPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMP 542

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>FOXD1_MOUSE (Q61345) Forkhead box protein D1 (Forkhead-related protein FKHL8)|
           (Forkhead-related transcription factor 4) (FREAC-4)
           (Brain factor-2) (HFH-BF-2)
          Length = 456

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = +3

Query: 9   PPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGAMWPLRTAIGH 164
           PP   P  LF+   AAA     P   P  PP    P  P  A    RTA G+
Sbjct: 283 PPCAPPSALFAAAAAAAAAAFHPHSPPPPPPPPPPP--PGAAAELARTAFGY 332

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>CL46_BOVIN (Q8MHZ9) Collectin-46 precursor (CL-46) (46 kDa collectin)|
          Length = 371

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 145 RGHMAPVGKEGLATVGGRCGA--PDGSMGGRAAASVRENRGSGWKRGGE 5
           RG    +G  G A V G  GA  P G  G R    ++ +RG   +RG +
Sbjct: 162 RGAPGELGAPGSAGVAGPAGAIGPQGPSGARGPPGLKGDRGDPGERGAK 210

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 25.8 bits (55), Expect(2) = 6.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 61  GPPSSHPAPHNGH 99
           GPP  H +PH+GH
Sbjct: 657 GPPHPHMSPHHGH 669



 Score = 21.6 bits (44), Expect(2) = 6.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 41  PHTGGGSAPH 70
           PH GGG  PH
Sbjct: 615 PHMGGGPNPH 624

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>SMAD6_HUMAN (O43541) Mothers against decapentaplegic homolog 6 (SMAD 6)|
           (Mothers against DPP homolog 6) (Smad6) (hSMAD6)
          Length = 496

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -3

Query: 145 RGHMAPVGKEGLATVGGRCGAPDGSMGGRAAASVRENRGSGWKR 14
           R  + P  +EG  + GG  G  DGS+G RA  + R   G G  R
Sbjct: 15  RSRVVPNREEG-GSGGGGGGDEDGSLGSRAEPAPRAREGGGCGR 57

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>AVEN_MOUSE (Q9D9K3) Cell death regulator Aven|
          Length = 342

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
 Frame = -3

Query: 148 RRGHMAPVGKE---GLATVGGRCGAPDGSMGGRAAASVRENRGSGWKRGGEW 2
           R G   P G     G AT   R G  DG          R  RG G  RGG W
Sbjct: 14  RGGRERPGGDREPVGAATALARGGCGDGGGRRGRGRGFRRGRGGGGLRGGRW 65

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>NRG3_MOUSE (O35181) Pro-neuregulin-3, membrane-bound isoform precursor|
           (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)]
          Length = 713

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  PLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTGA 134
           P FS +   +RPP+     P  P T A PS+PT A
Sbjct: 199 PFFSSSTPGSRPPM-----PGAPSTQAMPSWPTAA 228

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>ZN499_HUMAN (Q96K62) Zinc finger protein 499|
          Length = 511

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 24  PLPLFSLTLAAARPPIEPSGAPQRPPTVASPSF 122
           P+ LF   L A  PP  P  AP  P     P+F
Sbjct: 328 PVALFPFHLGAPGPPAPPPSAPSGPAPAPPPAF 360

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>HXD1_HUMAN (Q9GZZ0) Homeobox protein Hox-D1|
          Length = 328

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +3

Query: 42  LTLAAARPPIEPSGAPQRPPTVASPSFPTGAMWPLRTA 155
           L LAAARP   P  AP R P+V  P+ P  A   L  A
Sbjct: 54  LPLAAARPSPSPPAAPAR-PSVPPPAAPQYAQCTLEGA 90

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>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)|
          Length = 641

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASP 116
           +PP   P PL        RPP  P+G P  PP  A P
Sbjct: 404 APPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPP 440

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>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASP 116
           +PP   P PL        RPP  P+G P  PP  A P
Sbjct: 404 APPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPP 440

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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 6   SPPRFHPLPLFSLTLAAARPPIEPSGA--PQRPPTVASPS 119
           SPP F P P F    AA  PP  P  A  P  PP ++ PS
Sbjct: 349 SPPSFPPHPDF----AAPPPPPPPPAADYPMPPPPLSQPS 384

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>FUR11_DROME (P26016) Furin-like protease 1, isoforms 1/1-X/2 precursor (EC|
           3.4.21.75) (Furin-1) (Kex2-like endoprotease 1)
           (dKLIP-1)
          Length = 1269

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 51  AAARPPIEPSGAPQRPPTVASPSFP 125
           A    P  PS AP  PPTVA P  P
Sbjct: 151 AGGSSPAAPSSAPSSPPTVAVPPPP 175

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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -3

Query: 145  RGHMAPVGKEGLATVGGRCGAPDGSMGGRAAASVRENRGSGWKRG 11
            RG   PVG++GL    G+ G P G MG      ++ + GS  ++G
Sbjct: 1410 RGIPGPVGEQGLPGAAGQDG-PPGPMGPPGLPGLKGDPGSKGEKG 1453

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>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC|
           3.4.21.75) (Furin-1) (Kex2-like endoprotease 1)
           (dKLIP-1)
          Length = 1101

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 51  AAARPPIEPSGAPQRPPTVASPSFP 125
           A    P  PS AP  PPTVA P  P
Sbjct: 151 AGGSSPAAPSSAPSSPPTVAVPPPP 175

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>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 9   PPRFHPLPL-FSLTLAAARPPIEPSGAPQRPPTVASPSFPT 128
           PP   P P+ F  T     P + P+G P  PP    PS P+
Sbjct: 54  PPSATPSPVPFGPTPTGMYPSVPPTGPPPGPPAPFPPSGPS 94

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>ZCHC8_PONPY (Q5R789) Zinc finger CCHC domain-containing protein 8|
          Length = 704

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 12  PRFHPLPLFSLTLAAARPPIEPSGAPQ 92
           PR  P P+F+  L    PP+ PS +PQ
Sbjct: 474 PRGTPPPIFTPPLPKGTPPLTPSDSPQ 500

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>Y911_CAUCR (P33976) Hypothetical protein CC0911|
          Length = 493

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +3

Query: 6   SPPRFHP-LPLFSLTLAAARPPIEPSGAPQRPPTVASPSFPTG 131
           +PP   P  P+ +    A+ PP +P+ AP       SP F +G
Sbjct: 84  APPAIQPPAPVATTVAKASPPPAKPASAPTEITWKGSPQFTSG 126

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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 124 GKEGLATVGGRCGAPDGSMGGRAAASVRENRGSGWKRGG 8
           G  G    GGR G   G+MGG    +  +N G  W  GG
Sbjct: 207 GGGGRGGPGGRAGGNRGNMGGGNYGN--QNGGGNWNNGG 243

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>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 9   PPRFHPLPLFSLTLAAARPPIEPSGAPQRPPTVASPS 119
           PP   PLPL     AAA PP+ P   P+  P+   PS
Sbjct: 52  PPPPPPLPL----AAAAPPPLNPPTPPRAAPSPVVPS 84

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>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)|
           (VITO1 protein)
          Length = 317

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 3   HSPPRFHPLPLFSLTLAAARPPIEPSGAPQRPP-TVASPSFPTGAMW 140
           H  PR+ PL + + +   AR    P+ AP  PP  ++    P GA W
Sbjct: 234 HFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSGKGEPAGAAW 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.130    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,629,460
Number of Sequences: 219361
Number of extensions: 909712
Number of successful extensions: 5608
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5540
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result