>CYF_ODOSI (P49476) Apocytochrome f precursor|
          Length = 314

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 20  PRYEGESRGRS-LKPAGEQGDVNGGGAVLRG 109
           P Y G +RGR  + P GE+ ++N  GAV  G
Sbjct: 177 PLYAGGNRGRGQVYPTGEKSNINSFGAVQAG 207

>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)|
          Length = 697

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 2   ASHNYRPRYEGESRGRSLKPAGEQGDVNGGGAVLRGP 112
           AS + +  ++ +    SL+ AGE+G V GG AV+  P
Sbjct: 635 ASSSLKSSHDIKIESSSLEHAGERGTVGGGAAVVSVP 671

>GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (GDF-6)|
           (Cartilage-derived morphogenetic protein 2) (CDMP-2)
           (Fragment)
          Length = 436

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 120 PRAGPRSTAPPPLTSPCSPAGFRDLPLLSPS 28
           P  G   + PPP   P  P+G  D  L SPS
Sbjct: 280 PGGGAEGSGPPPPPPPPPPSGTPDAGLWSPS 310

>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 120 PRAGPRSTAPPPLTSPCSPAGFRDLPLLSPSY 25
           P   P ST+PPP  SP  P      PL  P Y
Sbjct: 52  PPLPPPSTSPPPPASPLPPPVSPPPPLSPPPY 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,755,596
Number of Sequences: 219361
Number of extensions: 260960
Number of successful extensions: 1501
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)