ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
3gb|CP000264.1| Jannaschia sp. CCS1, complete genome 46 0.099
4emb|AJ229135.1|ARA229135 Asteronema rhodochortonoides partial la... 46 0.099
5gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 44 0.39
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.39
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
9dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
10dbj|AK100442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
11dbj|AK067783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
12dbj|AK066460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
14dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AK120982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
16dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.5
17gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
18gb|AY549205.1| Streptomyces tubercidicus ferredoxin reductase (f... 40 6.1
19ref|XM_524839.1| PREDICTED: Pan troglodytes similar to seven tra... 40 6.1
20gb|AC121551.11| Mus musculus chromosome 1, clone RP24-144H23, co... 40 6.1
21gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
22gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
23gb|BT018712.1| Zea mays clone EL01N0516F06.d mRNA sequence 40 6.1
24gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
25ref|NM_001014432.1| Homo sapiens v-akt murine thymoma viral onco... 40 6.1
26ref|NM_001014431.1| Homo sapiens v-akt murine thymoma viral onco... 40 6.1
27ref|XM_856926.1| PREDICTED: Canis familiaris similar to HBxAg tr... 40 6.1
28ref|XM_537196.2| PREDICTED: Canis familiaris similar to HBxAg tr... 40 6.1
29gb|AF545573.1| Pan troglodytes G-protein coupled receptor (TAS1R... 40 6.1
30ref|NM_152228.1| Homo sapiens taste receptor, type 1, member 3 (... 40 6.1
31gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.1
32emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.1
33gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.1
34gb|AC104070.3| Homo sapiens BAC clone RP11-279K24 from 4, comple... 40 6.1
35emb|CR385707.1| Gallus gallus finished cDNA, clone ChEST577k12 40 6.1
36gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.1
37tpg|BK000152.1| TPA: TPA_exp: Homo sapiens G-protein coupled rec... 40 6.1
38gb|BC084538.1| Homo sapiens v-akt murine thymoma viral oncogene ... 40 6.1
39gb|BC000479.2| Homo sapiens v-akt murine thymoma viral oncogene ... 40 6.1
40dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.1
42dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
43gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epoth... 40 6.1
44dbj|AK073598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
45emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.1
46emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.1
47gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.1
48emb|AL583722.6|CNS07EFU Human chromosome 14 DNA sequence BAC R-9... 40 6.1
49emb|AL139287.24| Human DNA sequence from clone RP5-890O3 on chro... 40 6.1
50emb|AL590327.3|CNS07EG8 Human chromosome 14 DNA sequence Partial... 40 6.1
51dbj|AB065647.1| Homo sapiens gene for seven transmembrane helix ... 40 6.1 
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 125   gcggtggcggcgatgtcgcggctgcagcgagggctgcggccggtgctgcaggt 177
             ||||||||||||||||||||| || |||  |||||||||||||||||||||||
Sbjct: 76308 gcggtggcggcgatgtcgcggatggagcaggggctgcggccggtgctgcaggt 76360



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 300   tccgcgacggcaccgtcatacgcgtcctcgacta 333
             |||||| ||||||| |||| ||||||||||||||
Sbjct: 76474 tccgcgccggcaccatcatccgcgtcctcgacta 76507



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gccggtgctgcaggtggtgg 182
             ||||||||||||||||||||
Sbjct: 79589 gccggtgctgcaggtggtgg 79608
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                   
Query: 125    gcggtggcggcgatgtcgcggctgcagcgagggctgcggccggtgctgcaggt 177
              ||||||||||||||||||||| || |||  |||||||||||||||||||||||
Sbjct: 558909 gcggtggcggcgatgtcgcggatggagcaggggctgcggccggtgctgcaggt 558961



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 300    tccgcgacggcaccgtcatacgcgtcctcgacta 333
              |||||| ||||||| |||| ||||||||||||||
Sbjct: 559075 tccgcgccggcaccatcatccgcgtcctcgacta 559108



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 184      cgcccccgcccgccgcggcgccacggtc 211
                |||| |||||||||||| ||||||||||
Sbjct: 14864477 cgccgccgcccgccgcgccgccacggtc 14864504



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    gccggtgctgcaggtggtgg 182
              ||||||||||||||||||||
Sbjct: 562190 gccggtgctgcaggtggtgg 562209
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 108     tggacctgacccacggcgcggtg 130
               |||||||||||||||||||||||
Sbjct: 1770316 tggacctgacccacggcgcggtg 1770294



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     cctgacccacggcgcggtgg 131
               ||||||||||||||||||||
Sbjct: 2676142 cctgacccacggcgcggtgg 2676161
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>emb|AJ229135.1|ARA229135 Asteronema rhodochortonoides partial large subunit rRNA gene
          Length = 624

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 282 tcgtcaggaccggccgcctccgcgacg 308
           |||||||||||||||||| ||||||||
Sbjct: 602 tcgtcaggaccggccgccgccgcgacg 576
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 177    tggtgggcgcccccgcccgccgcggcgcca 206
              |||||||||||| ||||||| |||||||||
Sbjct: 129168 tggtgggcgcccgcgcccgcggcggcgcca 129139
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 177      tggtgggcgcccccgcccgccgcggcgcca 206
                |||||||||||| ||||||| |||||||||
Sbjct: 21436257 tggtgggcgcccgcgcccgcggcggcgcca 21436228
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 300      tccgcgacggcaccgtcatacgcgtcctcgacta 333
                |||||| ||||||| |||| ||||||||||||||
Sbjct: 15673634 tccgcgccggcaccatcatccgcgtcctcgacta 15673667
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 177      tggtgggcgcccccgcccgccgcggcgcca 206
                |||||||||||| ||||||| |||||||||
Sbjct: 21429286 tggtgggcgcccgcgcccgcggcggcgcca 21429257
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>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0075N02
          Length = 186945

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 300   tccgcgacggcaccgtcatacgcgtcctcgacta 333
             |||||| ||||||| |||| ||||||||||||||
Sbjct: 71491 tccgcgccggcaccatcatccgcgtcctcgacta 71524
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>dbj|AK100442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089N19, full
           insert sequence
          Length = 2359

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 177 tggtgggcgcccccgcccgccgcggcgcca 206
           |||||||||||| ||||||| |||||||||
Sbjct: 358 tggtgggcgcccgcgcccgcggcggcgcca 387
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>dbj|AK067783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119L12, full
           insert sequence
          Length = 1710

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 300 tccgcgacggcaccgtcatacgcgtcctcgacta 333
           |||||| ||||||| |||| ||||||||||||||
Sbjct: 874 tccgcgccggcaccatcatccgcgtcctcgacta 907
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>dbj|AK066460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068O04, full
           insert sequence
          Length = 3792

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 300 tccgcgacggcaccgtcatacgcgtcctcgacta 333
           |||||| ||||||| |||| ||||||||||||||
Sbjct: 928 tccgcgccggcaccatcatccgcgtcctcgacta 961
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 187      ccccgcccgccgcggcgccac 207
                |||||||||||||||||||||
Sbjct: 28380357 ccccgcccgccgcggcgccac 28380377
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>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 187   ccccgcccgccgcggcgccac 207
             |||||||||||||||||||||
Sbjct: 95457 ccccgcccgccgcggcgccac 95477
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>dbj|AK120982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042C18, full
           insert sequence
          Length = 1296

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 187 ccccgcccgccgcggcgccac 207
           |||||||||||||||||||||
Sbjct: 61  ccccgcccgccgcggcgccac 41
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 163     gccggtgctgcaggtggtgggcgcc 187
               ||||||||||| |||||||||||||
Sbjct: 2366258 gccggtgctgctggtggtgggcgcc 2366282
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     ggcggcgatgtcgcggctgc 149
               ||||||||||||||||||||
Sbjct: 1607484 ggcggcgatgtcgcggctgc 1607503
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>gb|AY549205.1| Streptomyces tubercidicus ferredoxin reductase (fre3) gene,
           complete cds
          Length = 1266

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 286 caggaccggccgcctccgcgacggcacc 313
           |||||||| ||||||| |||||||||||
Sbjct: 273 caggaccgtccgcctcggcgacggcacc 300
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>ref|XM_524839.1| PREDICTED: Pan troglodytes similar to seven transmembrane helix
           receptor (LOC469455), mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 ggcggcgatgtcgcggctgc 149
           ||||||||||||||||||||
Sbjct: 345 ggcggcgatgtcgcggctgc 326
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>gb|AC121551.11| Mus musculus chromosome 1, clone RP24-144H23, complete sequence
          Length = 168683

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     gggaggtgctatggaggtgg 110
              ||||||||||||||||||||
Sbjct: 139940 gggaggtgctatggaggtgg 139921
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>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 184   cgcccccgcccgccgcggcgccacggtc 211
             |||| |||||||||||| ||||||||||
Sbjct: 15392 cgccgccgcccgccgcgccgccacggtc 15419
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>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0109A13, complete sequence
          Length = 134258

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 184   cgcccccgcccgccgcggcgccacggtc 211
             |||| |||||||||||| ||||||||||
Sbjct: 90819 cgccgccgcccgccgcgccgccacggtc 90846
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>gb|BT018712.1| Zea mays clone EL01N0516F06.d mRNA sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 ttcctgctctccgacggcgt 240
           ||||||||||||||||||||
Sbjct: 90  ttcctgctctccgacggcgt 109
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     acggcgcggtggcggcgatg 139
               ||||||||||||||||||||
Sbjct: 6032468 acggcgcggtggcggcgatg 6032487
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>ref|NM_001014432.1| Homo sapiens v-akt murine thymoma viral oncogene homolog 1 (AKT1),
           transcript variant 2, mRNA
          Length = 2878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcgcccccgcccgccgcggc 202
           ||||||||||||||||||||
Sbjct: 136 gcgcccccgcccgccgcggc 155
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>ref|NM_001014431.1| Homo sapiens v-akt murine thymoma viral oncogene homolog 1 (AKT1),
           transcript variant 3, mRNA
          Length = 2794

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcgcccccgcccgccgcggc 202
           ||||||||||||||||||||
Sbjct: 136 gcgcccccgcccgccgcggc 155
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>ref|XM_856926.1| PREDICTED: Canis familiaris similar to HBxAg transactivated protein
            2, transcript variant 2 (LOC480075), mRNA
          Length = 8727

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  ccggtgctgcaggtggtggg 183
            ||||||||||||||||||||
Sbjct: 3370 ccggtgctgcaggtggtggg 3351
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>ref|XM_537196.2| PREDICTED: Canis familiaris similar to HBxAg transactivated protein
            2, transcript variant 1 (LOC480075), mRNA
          Length = 8784

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  ccggtgctgcaggtggtggg 183
            ||||||||||||||||||||
Sbjct: 3427 ccggtgctgcaggtggtggg 3408
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>gb|AF545573.1| Pan troglodytes G-protein coupled receptor (TAS1R3) gene, complete
           cds
          Length = 3217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 ggcggcgatgtcgcggctgc 149
           ||||||||||||||||||||
Sbjct: 580 ggcggcgatgtcgcggctgc 561
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>ref|NM_152228.1| Homo sapiens taste receptor, type 1, member 3 (TAS1R3), mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 ggcggcgatgtcgcggctgc 149
           ||||||||||||||||||||
Sbjct: 381 ggcggcgatgtcgcggctgc 362
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     gacctgacccacggcgcggt 129
               ||||||||||||||||||||
Sbjct: 1804261 gacctgacccacggcgcggt 1804280
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>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    ccggccgcctccgcgacggcaccg 314
              |||||||| |||||||||||||||
Sbjct: 217945 ccggccgcgtccgcgacggcaccg 217922
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     acggcgcggtggcggcgatg 139
               ||||||||||||||||||||
Sbjct: 6701177 acggcgcggtggcggcgatg 6701196
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>gb|AC104070.3| Homo sapiens BAC clone RP11-279K24 from 4, complete sequence
          Length = 123291

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   ggcgtgcactcccaggaggg 255
             ||||||||||||||||||||
Sbjct: 17964 ggcgtgcactcccaggaggg 17945
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>emb|CR385707.1| Gallus gallus finished cDNA, clone ChEST577k12
          Length = 839

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 ggcgcccccgcccgccgcgg 201
           ||||||||||||||||||||
Sbjct: 134 ggcgcccccgcccgccgcgg 115
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 155     gggctgcggccggtgctgcaggtg 178
               |||||| |||||||||||||||||
Sbjct: 3945835 gggctgtggccggtgctgcaggtg 3945812
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>tpg|BK000152.1| TPA: TPA_exp: Homo sapiens G-protein coupled receptor (TAS1R3)
           mRNA, complete cds
          Length = 2559

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 ggcggcgatgtcgcggctgc 149
           ||||||||||||||||||||
Sbjct: 381 ggcggcgatgtcgcggctgc 362
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>gb|BC084538.1| Homo sapiens v-akt murine thymoma viral oncogene homolog 1,
           transcript variant 2, mRNA (cDNA clone MGC:99656
           IMAGE:6645486), complete cds
          Length = 2868

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcgcccccgcccgccgcggc 202
           ||||||||||||||||||||
Sbjct: 130 gcgcccccgcccgccgcggc 149
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>gb|BC000479.2| Homo sapiens v-akt murine thymoma viral oncogene homolog 1,
           transcript variant 3, mRNA (cDNA clone MGC:8686
           IMAGE:2964603), complete cds
          Length = 2729

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcgcccccgcccgccgcggc 202
           ||||||||||||||||||||
Sbjct: 71  gcgcccccgcccgccgcggc 90
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     gggctgcggccggtgctgca 174
               ||||||||||||||||||||
Sbjct: 1993291 gggctgcggccggtgctgca 1993310
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     cacggcgcggtggcggcgat 138
               ||||||||||||||||||||
Sbjct: 4003442 cacggcgcggtggcggcgat 4003461



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 182     ggcgcccccgcccgccgcggcgcc 205
               ||||||| ||||||||||||||||
Sbjct: 1752138 ggcgcccgcgcccgccgcggcgcc 1752161



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    gcgcccccgcccgccgcggc 202
              ||||||||||||||||||||
Sbjct: 502942 gcgcccccgcccgccgcggc 502961
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>dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E12, full
           insert sequence
          Length = 1717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 184 cgcccccgcccgccgcggcgccacggtc 211
           |||| |||||||||||| ||||||||||
Sbjct: 74  cgccgccgcccgccgcgccgccacggtc 101
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>gb|AF210843.1|AF210843 Sorangium cellulosum strain So ce90 epothilone biosynthesis gene
             cluster, complete sequence
          Length = 68750

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   tgctctccgacggcgtgcactccc 248
             |||||||||| |||||||||||||
Sbjct: 67437 tgctctccgagggcgtgcactccc 67460
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>dbj|AK073598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047G19, full
           insert sequence
          Length = 3170

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 gccggtgctgcaggtggtgg 182
           ||||||||||||||||||||
Sbjct: 181 gccggtgctgcaggtggtgg 200
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     acggcgcggtggcggcgatg 139
               ||||||||||||||||||||
Sbjct: 5548422 acggcgcggtggcggcgatg 5548441
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    ggcggcgatgtcgcggctgc 149
              ||||||||||||||||||||
Sbjct: 530957 ggcggcgatgtcgcggctgc 530976
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 191     gcccgccgcggcgccacggtccgg 214
               |||||||||||| |||||||||||
Sbjct: 3496677 gcccgccgcggctccacggtccgg 3496654
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>emb|AL583722.6|CNS07EFU Human chromosome 14 DNA sequence BAC R-982M15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    gcgcccccgcccgccgcggc 202
              ||||||||||||||||||||
Sbjct: 202548 gcgcccccgcccgccgcggc 202529
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>emb|AL139287.24| Human DNA sequence from clone RP5-890O3 on chromosome 1 Contains the
             AKIP gene for aurora-A kinase interacting protein, a novel
             gene (FLJ90811) a NADH dehydrogenase (ubiquinone) 1 beta
             subcomplex 4 15kDa (NDUFB4) pseudogene, a novel gene
             (MGC3047), the DVL1 gene for dishevelled dsh homolog 1
             (Drosophila), the TAS1R3 gene for taste receptor type 1
             member 3, a novel gene (MGC10334), a novel gene
             (FLJ20542), a novel gene and five CpG islands, complete
             sequence
          Length = 84445

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   ggcggcgatgtcgcggctgc 149
             ||||||||||||||||||||
Sbjct: 31780 ggcggcgatgtcgcggctgc 31761
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>emb|AL590327.3|CNS07EG8 Human chromosome 14 DNA sequence Partial sequence from BAC C-2507D9 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 59297

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   gcgcccccgcccgccgcggc 202
             ||||||||||||||||||||
Sbjct: 28530 gcgcccccgcccgccgcggc 28549
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>dbj|AB065647.1| Homo sapiens gene for seven transmembrane helix receptor, complete
           cds, isolate:CBRC7TM_210
          Length = 4256

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 ggcggcgatgtcgcggctgc 149
           ||||||||||||||||||||
Sbjct: 682 ggcggcgatgtcgcggctgc 663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,083,929
Number of Sequences: 3902068
Number of extensions: 3083929
Number of successful extensions: 68260
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66505
Number of HSP's gapped (non-prelim): 1755
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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