ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1I17RA_HUMAN (Q96F46) Interleukin-17 receptor A precursor (IL-17 ... 35 0.12
2ADEC2_RHIME (Q92VC6) Adenine deaminase 2 (EC 3.5.4.2) (Adenase 2... 30 3.8
3GAL3_YEAST (P13045) Protein GAL3 29 8.5

>I17RA_HUMAN (Q96F46) Interleukin-17 receptor A precursor (IL-17 receptor)|
          Length = 866

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = +3

Query: 192 SFPHAVKQQCWEKAEKVPGRDPERWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGK 371
           SFPH     C+E    +P   PE + + +   +  R L GC    C     I P+     
Sbjct: 236 SFPHMENHSCFEHMHHIPAPRPEEFHQRSNVTLTLRNLKGC----CRHQVQIQPFF---S 288

Query: 372 STLENCQVLQATVN 413
           S L +C    ATV+
Sbjct: 289 SCLNDCLRHSATVS 302



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>ADEC2_RHIME (Q92VC6) Adenine deaminase 2 (EC 3.5.4.2) (Adenase 2) (Adenine|
           aminase 2)
          Length = 593

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = +3

Query: 168 TPSASEPRSFPHAVKQQCWEKAE--KVPGRDPERWRRDALGNIVFRKLVGCPGCL 326
           TP+       P  V    W+  E   V G    RW  DA+G +  R +V  P C+
Sbjct: 98  TPAVYAAAVVPRGVTTVVWDPHEFGNVSGLAGVRWAVDAMGGLPLRAVVLAPSCV 152



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>GAL3_YEAST (P13045) Protein GAL3|
          Length = 520

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 363 GGKSTLENCQVLQATVNRSKGNNTEISKSELAQRSA----YCRVSGRDMD 500
           GG S+   C    AT+  + G N +ISK +L + +A    Y  V+   MD
Sbjct: 160 GGLSSAFTCAAALATIRANMGKNFDISKKDLTRITAVAEHYVGVNNGGMD 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,547,156
Number of Sequences: 219361
Number of extensions: 1048542
Number of successful extensions: 3073
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3058
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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