>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2|
          Length = 561

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +3

Query: 6   PRARTAAASCPIPSPPGPVASYHHSPREIDRSRPIPSGRRNAAATARQPSLAGRIESL 179
           P A   A + P PSP  P       PR + +  P+PS     AA        GR+E+L
Sbjct: 278 PTATATATAAPAPSPSRP-----RRPRLLRKRAPVPSAALPVAAVEALAVRRGRVEAL 330

>GRASP_MOUSE (Q9JJA9) General receptor for phosphoinositides 1-associated|
           scaffold protein (GRP1-associated scaffold protein)
          Length = 392

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 283 LPPPPPLTKSRSLFDRIIAPPTDPLFACPANRLQRRDSIRPANDG 149
           LPPPPP   +R+L       P   LF  P + L R  S+R A  G
Sbjct: 297 LPPPPP--PARALGPSSAETPASVLFPAPRSTLSRSASVRCAGPG 339

>NU5M_SQUAC (Q9ZZ44) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 610

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 233 NPVKKXXXXXXXXXXXXXXXLPTMDPQVAVRGGDWVSAVTPLLKL--LCLTVIGLLLA 400
           NP+K+               LP M  Q+          +TPLLKL  L +T+IGLLLA
Sbjct: 456 NPIKRLAYGSILAGLIITSNLPPMKTQIMT--------MTPLLKLSALLVTIIGLLLA 505

>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
 Frame = +3

Query: 6   PRARTAAASCPIPSP----------PGPVASYHHSPREIDRSRPIPSGR-RNAAATARQP 152
           P   T  +S PIP P          P P  S   SP    RS PIP  R R+ A+ +  P
Sbjct: 140 PSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSP 199

Query: 153 SLA 161
           SL+
Sbjct: 200 SLS 202

>CABL2_MOUSE (Q8K3M5) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)|
           (Ik3-2)
          Length = 481

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = -2

Query: 280 PPPPPLTKSRSLFDRIIAPPTDPLFACPANRLQRRDSIRPANDGCLAVAAAFLRPDGIGL 101
           PPPPP T++R       APP  P    P          RPA  G L+   A   P G+GL
Sbjct: 72  PPPPPPTEAR----EAPAPPPAPPGGLPGL------PARPAPQGLLSPTTA---PAGLGL 118

Query: 100 D 98
           D
Sbjct: 119 D 119

>YQI4_CAEEL (Q09505) Hypothetical protein C45G9.4|
          Length = 292

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = +3

Query: 21  AAASCPIPSPPGPVASYHHSPREIDRSRPIPSGRRNAAATARQPSLAGRIESLL 182
           A A   +P PP P+      P    RS P+   R  ++ T R  +  G  E ++
Sbjct: 109 AKAKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRTSATTGTTEQMV 162

>FTSN_ECOLI (P29131) Cell division protein ftsN|
          Length = 319

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 1   PGQEQEQQPHPARSR-----LLPVPSHHITTAR---ERSIDRDRSHPAVGTRRRRRDNHH 156
           P Q Q +Q  PA S+     LL  P+H  TTA+   +++    R+  A      ++D   
Sbjct: 190 PVQAQPRQSKPASSQQPYQDLLQTPAH--TTAQSKPQQAAPVARAADAPKPTAEKKDERR 247

Query: 157 WLVESNLFFGAD 192
           W+V+   F GA+
Sbjct: 248 WMVQCGSFRGAE 259

>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219|
          Length = 722

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +3

Query: 3   RPRARTAAASCPIPSPPGPVASYHHSPREIDRSRPIPSGRRNAAAT 140
           RP A T+AA  P P P  P       PR + +  P P   R A  T
Sbjct: 217 RPLAATSAAPPPQPQPQPPPQP---EPRSVPQPEPEPEPEREATPT 259

>DAAM2_HUMAN (Q86T65) Disheveled-associated activator of morphogenesis 2|
          Length = 1068

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 280 PPPP--PLTKSRSLFDRIIAPPTDPL-FAC 200
           PPPP  PLT S S+    + PP  PL FAC
Sbjct: 522 PPPPGGPLTLSSSMTTNDLPPPPPPLPFAC 551

>BCTN7_SHEEP (P50415) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)|
          Length = 190

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +3

Query: 3   RPRARTAAASCPIPSP-----PGPVASYHHSPREIDRSRPIPSGR 122
           RPR R    S P+P P     P P+      PR I R +P P  R
Sbjct: 144 RPRPRPRPRSLPLPRPQPRRIPRPILLPWRPPRPIPRPQPQPIPR 188

>OPA_DROME (P39768) Pair-rule protein odd-paired|
          Length = 609

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 21  AAASCPIPSPPGPVASYHHSPREIDRSRPIPSGRRNAAATA 143
           A+AS  +P P GP  S+HH P    ++ P P     AAA+A
Sbjct: 513 ASASAYLPPPLGPPPSHHHHPHH-HQAAPSPGA---AAASA 549

>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 36  PIPSPPGPVASYHHSPREIDRSRPIPSGRR 125
           P+P P GP+ S    P  I+    +P G R
Sbjct: 470 PVPGPRGPIPSGMQGPSPINMGAVVPQGSR 499

>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 36  PIPSPPGPVASYHHSPREIDRSRPIPSGRR 125
           P+P P GP+ S    P  I+    +P G R
Sbjct: 470 PVPGPRGPIPSGMQGPSPINMGAVVPQGSR 499

>KCNV2_HUMAN (Q8TDN2) Potassium voltage-gated channel subfamily V member 2|
           (Voltage-gated potassium channel subunit Kv8.2)
          Length = 545

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 469 EEREDELAEQLKVALGHHLRPRVREEEPD 383
           EER DEL+E+LK+   H LR + + EE +
Sbjct: 204 EERRDELSERLKIQ--HELRAQAQVEEAE 230

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +3

Query: 27  ASCPIPSPPGPVASYHHSPR--EIDRSRPIPSGRRNAAATARQPSLAG 164
           A CP PS P PV    H P+  + D   P   GR        QP L G
Sbjct: 87  AICPQPSTPAPVLPDGHGPQGPKGDPGPPGIPGRNGDPGLPGQPGLPG 134

>TBA_HAECO (P50719) Tubulin alpha chain|
          Length = 450

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 111 GSVSIDRSLSGCGDMMRRDREETGSGR 31
           G +  D+SL GC D       ETGSGR
Sbjct: 34  GQMPSDKSLGGCDDSFSTFFSETGSGR 60

>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)|
           (GAS2-related protein on chromosome 17) (GAR17 protein)
          Length = 880

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -2

Query: 289 SRLPPPPPLTKSRSLFDRIIAPPTDPLFACPANRLQRRDSIRPANDGCLAVAAAFLR 119
           S+ PPPP   K+ +  DR + PPT      P++   RR+  R A  G     A FLR
Sbjct: 314 SQSPPPPVDWKTYTSSDRRLRPPT------PSSPRPRRE--RGAGTGASREMAPFLR 362

>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 (TAK1-binding protein 3)
          Length = 716

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
 Frame = +3

Query: 42  PSPPGPVASYHHSPR------EIDRSRPIPSGRRNAAATARQPSLAGRIESLLWSRLAGQ 203
           PSPP P  SY H PR       +  S+ +PSG+    A    P +   +     S    Q
Sbjct: 175 PSPPPPPPSYMHIPRYSTNPITVTVSQNLPSGQTVPRALQILPQIPSNLYGSPGSIFIRQ 234

Query: 204 AKRGSVG 224
             + S G
Sbjct: 235 TSQSSSG 241

>HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8)|
          Length = 554

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 280 PPPPPLTKSRSLFDRIIAPPTDPLFACPANRLQRRDSI 167
           PPPP  + S +L +  +APP D +   P       D +
Sbjct: 137 PPPPTTSPSSTLVELELAPPMDVVVVNPTTTATTHDEV 174

>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 36   PIPSPPGPVASYHHSPREIDRSRPIPSGRR--NAAATARQPSLAGRIESLLWSRLAGQAK 209
            P+P+P  P      S   + +S+PI S        AT+  PS +  +E    +R+  +A+
Sbjct: 1180 PVPAPAAPQTLNPPSVSTVQQSKPIESNTHTPEVKATSESPSASSNLEDRA-ARIKAEAQ 1238

Query: 210  R 212
            R
Sbjct: 1239 R 1239

>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27  ASCPIPSPPGPVASYHHSPREIDRSRPIPS-GRRNAAATA 143
           ++CP P PP        SP+ + R  P PS G RN++A A
Sbjct: 206 SACPWPRPP--------SPKRLSRRSPKPSPGSRNSSAPA 237

>YQI9_CAEEL (Q09507) Hypothetical protein C45G9.9|
          Length = 294

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/54 (25%), Positives = 22/54 (40%)
 Frame = +3

Query: 21  AAASCPIPSPPGPVASYHHSPREIDRSRPIPSGRRNAAATARQPSLAGRIESLL 182
           A     +P PP P+      P    RS P+   R  ++ T R  +  G  E ++
Sbjct: 111 ATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQPRSVSSTTPRTSATTGTTEQMV 164

>RT12_OENHO (Q01607) 40S ribosomal protein S12, mitochondrial precursor|
          Length = 188

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 9   RARTAAASCPIPSPPGPVASYHHSPREIDR-SRPIPSGRRNAAATARQPSLAG 164
           R+R + +S  +P PP  ++S  H PR +D    P+      AAA  R P  +G
Sbjct: 16  RSRASISSSLLPFPPTSISSGFHVPRLLDAWKNPVA-----AAAAFRLPQSSG 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,774,440
Number of Sequences: 219361
Number of extensions: 1194556
Number of successful extensions: 6176
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6144
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)