ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480472.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
3dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5dbj|AK065037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
6gb|AY618459.1| Streptomyces tenebrarius 6-phosphogluconate dehyd... 46 0.10
7gb|CP000081.1| Leishmania major chromosome 35, complete sequence 44 0.41
8emb|BX031373.1|CNS08WDD Single read from an extremity of a full-... 42 1.6
9emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
15dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
16dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AK069255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
21emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial se... 42 1.6
22ref|XM_482944.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
23ref|XM_479897.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
24gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
25gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
26gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
27gb|AY244761.1| Rhodococcus sp. DS7 putative ECF sigma factor (ar... 40 6.3
28gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.3
29emb|AL512594.7| Human DNA sequence from clone RP11-549A6 on chro... 40 6.3
30emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on ch... 40 6.3
31emb|X12464.1|TTPGK Thermus thermophilus gene for phosphoglycerat... 40 6.3
32gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 40 6.3
33emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
34gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
35gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
38dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
39gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, r... 40 6.3
40dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
41dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
42dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.3
43dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
44dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
46dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
47dbj|AP005971.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
48dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
49dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
50gb|AE005073.1| Halobacterium sp. NRC-1 section 104 of 170 of the... 40 6.3
51dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
52dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
53dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
54dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
55dbj|AK110941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
56dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
57gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18... 40 6.3
58gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.3
59gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
60emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.3
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
62gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.3 
>ref|XM_480472.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2009

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 332 gactgggtgtcggcggtgacgccgctgctgaagctgctgtgcctgacggtgatcgg 387
           ||||||||||| || || | ||||||| |||||||||||||| ||||||| |||||
Sbjct: 372 gactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcgg 427
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                       
Query: 332     gactgggtgtcggcggtgacgccgctgctgaagctgctgtgcctgacggtgatcgg 387
               ||||||||||| || || | ||||||| |||||||||||||| ||||||| |||||
Sbjct: 5317133 gactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcgg 5317188



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       gagagagatcgatcgatcga 102
                ||||||||||||||||||||
Sbjct: 24517318 gagagagatcgatcgatcga 24517299



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       cgagagagatcgatcgatcg 101
                ||||||||||||||||||||
Sbjct: 23497982 cgagagagatcgatcgatcg 23498001



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 123     aggaacgcggcggcgacggcgaga 146
               ||||||||||||||| ||||||||
Sbjct: 1526491 aggaacgcggcggcggcggcgaga 1526468



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     cgcggcggcgacggcgagac 147
               ||||||||||||||||||||
Sbjct: 1213977 cgcggcggcgacggcgagac 1213958
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>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                      
Query: 332    gactgggtgtcggcggtgacgccgctgctgaagctgctgtgcctgacggtgatcgg 387
              ||||||||||| || || | ||||||| |||||||||||||| ||||||| |||||
Sbjct: 185489 gactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcgg 185544
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>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0610E02
          Length = 135816

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                      
Query: 332    gactgggtgtcggcggtgacgccgctgctgaagctgctgtgcctgacggtgatcgg 387
              ||||||||||| || || | ||||||| |||||||||||||| ||||||| |||||
Sbjct: 108721 gactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcgg 108776
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>dbj|AK065037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H10, full
           insert sequence
          Length = 2010

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 332 gactgggtgtcggcggtgacgccgctgctgaagctgctgtgcctgacggtgatcgg 387
           ||||||||||| || || | ||||||| |||||||||||||| ||||||| |||||
Sbjct: 372 gactgggtgtcagcagtcatgccgctgatgaagctgctgtgcttgacggtcatcgg 427
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>gb|AY618459.1| Streptomyces tenebrarius 6-phosphogluconate dehydratase (edd) gene,
           partial cds
          Length = 675

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 339 tgtcggcggtgacgccgctgctg 361
           |||||||||||||||||||||||
Sbjct: 632 tgtcggcggtgacgccgctgctg 654
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 8       aagagcaagaacagcagccgca 29
               ||||||||||||||||||||||
Sbjct: 1731750 aagagcaagaacagcagccgca 1731771



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 8       aagagcaagaacagcagccgca 29
               ||||||||||||||||||||||
Sbjct: 1706707 aagagcaagaacagcagccgca 1706728
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>emb|BX031373.1|CNS08WDD Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA46DB10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 840

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 351 cgccgctgctgaagctgctgt 371
           |||||||||||||||||||||
Sbjct: 802 cgccgctgctgaagctgctgt 822
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>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02,
             complete sequence
          Length = 167988

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cgagagagatcgatcgatcga 102
             |||||||||||||||||||||
Sbjct: 35095 cgagagagatcgatcgatcga 35075
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 82       cgagagagatcgatcgatcga 102
                |||||||||||||||||||||
Sbjct: 23317598 cgagagagatcgatcgatcga 23317578



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 85       gagagatcgatcgatcgaga 104
                ||||||||||||||||||||
Sbjct: 33287966 gagagatcgatcgatcgaga 33287985
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 82       cgagagagatcgatcgatcga 102
                |||||||||||||||||||||
Sbjct: 16744520 cgagagagatcgatcgatcga 16744540
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 85       gagagatcgatcgatcgagac 105
                |||||||||||||||||||||
Sbjct: 20546058 gagagatcgatcgatcgagac 20546038



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     ggaacgcggcggcgacggcg 143
               ||||||||||||||||||||
Sbjct: 7707572 ggaacgcggcggcgacggcg 7707553
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 123      aggaacgcggcggcgacggcg 143
                |||||||||||||||||||||
Sbjct: 23566680 aggaacgcggcggcgacggcg 23566700
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      agagagatcgatcgatcgaga 104
               |||||||||||||||||||||
Sbjct: 1622982 agagagatcgatcgatcgaga 1622962



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      gagatcgatcgatcgagacc 106
               ||||||||||||||||||||
Sbjct: 2080333 gagatcgatcgatcgagacc 2080352



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cgcggcggcgacggcgagac 147
              ||||||||||||||||||||
Sbjct: 832890 cgcggcggcgacggcgagac 832871
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    gagagatcgatcgatcgagac 105
             |||||||||||||||||||||
Sbjct: 63705 gagagatcgatcgatcgagac 63685
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    gagagatcgatcgatcgagac 105
             |||||||||||||||||||||
Sbjct: 11716 gagagatcgatcgatcgagac 11696
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>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408F06
          Length = 137462

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    agagagatcgatcgatcgaga 104
             |||||||||||||||||||||
Sbjct: 60213 agagagatcgatcgatcgaga 60193
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>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0481H08
          Length = 146841

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aggaacgcggcggcgacggcg 143
             |||||||||||||||||||||
Sbjct: 47644 aggaacgcggcggcgacggcg 47664
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>dbj|AK069255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016C19, full
           insert sequence
          Length = 725

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 aggaacgcggcggcgacggcg 143
           |||||||||||||||||||||
Sbjct: 400 aggaacgcggcggcgacggcg 420
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 82       cgagagagatcgatcgatcga 102
                |||||||||||||||||||||
Sbjct: 16697753 cgagagagatcgatcgatcga 16697773
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>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 116974

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    cgagagagatcgatcgatcga 102
             |||||||||||||||||||||
Sbjct: 40881 cgagagagatcgatcgatcga 40861
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>ref|XM_482944.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgagagagatcgatcgatcg 101
           ||||||||||||||||||||
Sbjct: 83  cgagagagatcgatcgatcg 64
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>ref|XM_479897.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 123 aggaacgcggcggcgacggcgaga 146
           ||||||||||||||| ||||||||
Sbjct: 599 aggaacgcggcggcggcggcgaga 622
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>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093C16,
              complete sequence
          Length = 206612

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    cggcggcgacggcgagacaa 149
              ||||||||||||||||||||
Sbjct: 140229 cggcggcgacggcgagacaa 140248



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    cggcggcgacggcgagacaa 149
              ||||||||||||||||||||
Sbjct: 119434 cggcggcgacggcgagacaa 119453
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>gb|AC145272.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0002L02, complete sequence
          Length = 165685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   cggcggcgacggcgagacaa 149
             ||||||||||||||||||||
Sbjct: 32368 cggcggcgacggcgagacaa 32387



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   cggcggcgacggcgagacaa 149
             ||||||||||||||||||||
Sbjct: 11573 cggcggcgacggcgagacaa 11592
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>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16,
              complete sequence
          Length = 127068

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cgcggcggcgacggcgagac 147
              ||||||||||||||||||||
Sbjct: 118583 cgcggcggcgacggcgagac 118564
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>gb|AY244761.1| Rhodococcus sp. DS7 putative ECF sigma factor (aryS) gene, complete
            cds; amd aryl sulphonate desulfurization operon, complete
            sequence
          Length = 7275

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   gcagccgcatcctgcccgatcccg 44
            ||||||||| ||||||||||||||
Sbjct: 5607 gcagccgcaccctgcccgatcccg 5584
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 348     tgacgccgctgctgaagctgctgt 371
               ||||||||||||||| ||||||||
Sbjct: 3065380 tgacgccgctgctgacgctgctgt 3065357
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>emb|AL512594.7| Human DNA sequence from clone RP11-549A6 on chromosome 9 Contains a
              pseudogene similar to part of a GTPase-activating protein,
              complete sequence
          Length = 166192

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    ttcagctgctcagcaagctc 454
              ||||||||||||||||||||
Sbjct: 140953 ttcagctgctcagcaagctc 140934
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>emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on chromosome 1 Contains the 5'
              end of the SMYD3 gene for SET and MYND domain containing 3,
              an ubiquitin specific protease 6 (Tre-2 oncogene) (USP6)
              pseudogene, a novel gene, a pseudogene similar to part of
              tumor necrosis factor receptor superfamily member 13B
              (TNFRSF13B), a pseudogene similar to part of
              carboxypeptidase D (CPD), the TFB2M gene for mitochondrial
              transcription factor B2, the 5' end of the gene for a novel
              protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215)
              and two CpG islands, complete sequence
          Length = 207486

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     gagagagatcgatcgatcga 102
              ||||||||||||||||||||
Sbjct: 111634 gagagagatcgatcgatcga 111653
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>emb|X12464.1|TTPGK Thermus thermophilus gene for phosphoglycerate kinase (EC 2.7.2.3)
          Length = 1271

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 319  ggtgcgcgggggcgactgggtgtcggcggtga 350
            |||| |||||||||||| |||| |||||||||
Sbjct: 1059 ggtgggcgggggcgactcggtggcggcggtga 1090
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>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
             biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ccgcaggtggcggtgcgcgg 327
             ||||||||||||||||||||
Sbjct: 34009 ccgcaggtggcggtgcgcgg 34028
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>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
             complete sequence
          Length = 151506

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gagagatcgatcgatcgaga 104
             ||||||||||||||||||||
Sbjct: 60227 gagagatcgatcgatcgaga 60246
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>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0022I16, complete sequence
          Length = 126133

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   cgcggcggcgacggcgagac 147
             ||||||||||||||||||||
Sbjct: 51515 cgcggcggcgacggcgagac 51496
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cgcggcggcgacggcgagac 147
              ||||||||||||||||||||
Sbjct: 509620 cgcggcggcgacggcgagac 509601
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     cgcggcggcgacggcgagac 147
               ||||||||||||||||||||
Sbjct: 5355385 cgcggcggcgacggcgagac 5355366
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     cggcggcgacggcgagacaa 149
               ||||||||||||||||||||
Sbjct: 9909602 cggcggcgacggcgagacaa 9909621



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     cggcggcgacggcgagacaa 149
               ||||||||||||||||||||
Sbjct: 9888807 cggcggcgacggcgagacaa 9888826
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       gagagagatcgatcgatcga 102
                ||||||||||||||||||||
Sbjct: 26997562 gagagagatcgatcgatcga 26997543
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>gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone
              BACR02B21, complete sequence
          Length = 186322

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ggccaagagcaagaacagca 23
              ||||||||||||||||||||
Sbjct: 135387 ggccaagagcaagaacagca 135368
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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1203H11
          Length = 156561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cgcggcggcgacggcgagac 147
              ||||||||||||||||||||
Sbjct: 127214 cgcggcggcgacggcgagac 127195
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>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0073J19
          Length = 165174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   cgcggcggcgacggcgagac 147
             ||||||||||||||||||||
Sbjct: 43284 cgcggcggcgacggcgagac 43265
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 319    ggtgcgcgggggcgactgggtgtcggcggtga 350
              |||| |||||||||||| |||| |||||||||
Sbjct: 867292 ggtgggcgggggcgactcggtggcggcggtga 867323
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>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443D08
          Length = 146670

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gagatcgatcgatcgagacc 106
              ||||||||||||||||||||
Sbjct: 142911 gagatcgatcgatcgagacc 142930
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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0480E02
          Length = 141862

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   gagatcgatcgatcgagacc 106
            ||||||||||||||||||||
Sbjct: 1445 gagatcgatcgatcgagacc 1464
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>dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0463F06
          Length = 144322

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   cgcggcggcgacggcgagac 147
             ||||||||||||||||||||
Sbjct: 55564 cgcggcggcgacggcgagac 55545
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>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1212_B09
          Length = 130728

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cgcggcggcgacggcgagac 147
              ||||||||||||||||||||
Sbjct: 110090 cgcggcggcgacggcgagac 110071
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>dbj|AP005971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0079K11
          Length = 130082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ggaacgcggcggcgacggcg 143
             ||||||||||||||||||||
Sbjct: 75134 ggaacgcggcggcgacggcg 75115
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>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0026F07
          Length = 137354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gagagagatcgatcgatcga 102
             ||||||||||||||||||||
Sbjct: 25578 gagagagatcgatcgatcga 25559
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461B08
          Length = 153743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gagagagatcgatcgatcga 102
             ||||||||||||||||||||
Sbjct: 50764 gagagagatcgatcgatcga 50745
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>gb|AE005073.1| Halobacterium sp. NRC-1 section 104 of 170 of the complete genome
          Length = 12021

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  gaacgcggcggcgacggcga 144
            ||||||||||||||||||||
Sbjct: 4714 gaacgcggcggcgacggcga 4733
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1163_G08
          Length = 150676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   aggaacgcggcggcgacggcgaga 146
             ||||||||||||||| ||||||||
Sbjct: 53979 aggaacgcggcggcggcggcgaga 53956
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>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1142B04
          Length = 161964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     gagagagatcgatcgatcga 102
              ||||||||||||||||||||
Sbjct: 133034 gagagagatcgatcgatcga 133015
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>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_E05
          Length = 126978

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    cgagagagatcgatcgatcg 101
             ||||||||||||||||||||
Sbjct: 89397 cgagagagatcgatcgatcg 89416
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>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091F23
          Length = 147699

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   cgcggcggcgacggcgagac 147
             ||||||||||||||||||||
Sbjct: 81056 cgcggcggcgacggcgagac 81037
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>dbj|AK110941.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-G11, full
           insert sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 123 aggaacgcggcggcgacggcgaga 146
           ||||||||||||||| ||||||||
Sbjct: 599 aggaacgcggcggcggcggcgaga 622
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>dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B01, full
           insert sequence
          Length = 1701

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgagagagatcgatcgatcg 101
           ||||||||||||||||||||
Sbjct: 83  cgagagagatcgatcgatcg 64
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>gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18 of 118 of the complete
              sequence
          Length = 270517

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ggccaagagcaagaacagca 23
              ||||||||||||||||||||
Sbjct: 176249 ggccaagagcaagaacagca 176230
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 415     ggtggtgcccaagggccacc 434
               ||||||||||||||||||||
Sbjct: 3883316 ggtggtgcccaagggccacc 3883335
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    ccgcaggtggcggtgcgcgg 327
              ||||||||||||||||||||
Sbjct: 851319 ccgcaggtggcggtgcgcgg 851300
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     aggaacgcggcggcgacggc 142
               ||||||||||||||||||||
Sbjct: 1320872 aggaacgcggcggcgacggc 1320853
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     cgcggcggcgacggcgagac 147
               ||||||||||||||||||||
Sbjct: 5356172 cgcggcggcgacggcgagac 5356153
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 319    ggtgcgcgggggcgactgggtgtcggcggtga 350
              |||| |||||||||||| |||| |||||||||
Sbjct: 536342 ggtgggcgggggcgactcggtggcggcggtga 536373


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,898,551
Number of Sequences: 3902068
Number of extensions: 2898551
Number of successful extensions: 93883
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90598
Number of HSP's gapped (non-prelim): 3285
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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