>Y1691_LEGPH (P37034) Hypothetical transporter lpg1691|
          Length = 464

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
 Frame = +1

Query: 325 PLFALLGF-LIFPFIWA-----IPESLVTAELSTAMPGNGGFVVWADRAFG 459
           P+ A LGF L+F +I+A     IP +LV AEL+TA P  GG  VW   AFG
Sbjct: 28  PISAKLGFSLVFYYIFAALTFFIPVALVAAELATAYPNTGGIYVWVREAFG 78

>AGP3_YEAST (P43548) General amino acid permease AGP3|
          Length = 558

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 295 GAEPAVQSAGPLFALLGFLIFPFI-WAIPESLVTAELSTAMPGNGGFVVWADR 450
           GA  A+   GPL  LLGF I   I +++ ES+   E+ T  P  GGF   A R
Sbjct: 74  GAGNALNKGGPLALLLGFSIIGIIAFSVMESI--GEMITLYPSGGGFTTLARR 124

>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
 Frame = -2

Query: 452 ARSAQTTKPPFPGMAVESSAVTSDSGMAQMKGKMRKPSSAKR-----GPADCTA-----G 303
           ++ A+ TKP  PG A  S    + +   Q K   ++P  AK      GPA   A     G
Sbjct: 238 SQQAEKTKPQAPGTAKPSQQSPAQTPAQQAKPVAQQPGPAKATVQQPGPAKSPAQPAGTG 297

Query: 302 SAP*GPPATSKKMRKMSG 249
            +P  PP T+K   + +G
Sbjct: 298 KSPAQPPVTAKPPAQQAG 315

>HXD13_CARPS (Q5EU41) Homeobox protein Hox-D13|
          Length = 333

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -2

Query: 452 ARSAQTTKPPFPGMAVESSAVTSDSGMAQMKGKMRKPSSAKRGPADCTAGSAP*GPPA 279
           A +A  +   +PG +  + + +S S  A +  +   PS AK  PA  TA +AP G PA
Sbjct: 58  AAAAAASGFAYPGTSERAGSASSSSSSAVVAARPEAPS-AKECPAPGTAATAPPGAPA 114

>GABP_ECOLI (P25527) GABA permease (4-amino butyrate transport carrier)|
           (Gamma-aminobutyrate permease)
          Length = 466

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 295 GAEPAVQSAGPLFALLGFLIFPFIWAIPESLVTAELSTAMPGNGGFVVWADRAFG 459
           G+  A+  AGP  A+L   +F  +  +    + AE++ A P  G F  +AD+A G
Sbjct: 35  GSSVAIAEAGP--AVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIG 87

>FRLA_ECOLI (P45539) Putative fructoselysine transporter frlA|
          Length = 445

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = +1

Query: 301 EPAVQSAGPLFALLGFLIFPFIWAIPESLVTAELSTAMPGNGGFVVWADRA 453
           E A  +  P   +L F+I   I  IP+  V AELSTA P NG   V+   A
Sbjct: 34  EVAKAAGTPWLTVLAFVIGGLI-VIPQMCVYAELSTAYPENGADYVYLKNA 83

>FRLA_ECO57 (Q8X845) Putative fructoselysine transporter frlA|
          Length = 445

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = +1

Query: 301 EPAVQSAGPLFALLGFLIFPFIWAIPESLVTAELSTAMPGNGGFVVWADRA 453
           E A  +  P   +L F+I   I  IP+  V AELSTA P NG   V+   A
Sbjct: 34  EVAKAAGTPWLTVLAFVIGGLI-VIPQMCVYAELSTAYPENGADYVYLKNA 83

>MMUP_ECOLI (Q47689) Probable S-methylmethionine permease|
          Length = 467

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 316 SAGPLFA-LLGFLIFPFIWAIPESLVTAELSTAMPGNGGFVVWADRAFG 459
           +AG L A L+G L+   +W + + L   ELS AMP  G F V+A R  G
Sbjct: 45  AAGTLLAYLIGALV---VWLVMQCL--GELSVAMPETGAFHVYAARYLG 88

>ROCC_BACSU (P39636) Amino-acid permease rocC|
          Length = 470

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 295 GAEPAVQSAGPLFALLGFLIFPFIWAIPESLVTAELSTAMPGNGGFVVWADRAFG 459
           G+   +  AGPL A+  ++I  F+  +   L   EL+ AMP  G F  +A +  G
Sbjct: 33  GSGFTISQAGPLGAIAAYIIGGFLMYLV-MLCLGELAVAMPVAGSFQAYATKFLG 86

>CLC4G_HUMAN (Q6UXB4) C-type lectin domain family 4 member G|
          Length = 293

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 274 EVAGGPYGAEPAVQSAGPLFALLGFLIFPFIWAIPESLVTAELST 408
           EV GGP+G      S  PLF  L  L+   +WA+  S++ ++ ST
Sbjct: 15  EVPGGPWGRW-VHWSRRPLFLALAVLVTTVLWAVILSILLSKAST 58

>DHG_ECOLI (P15877) Quinoprotein glucose dehydrogenase (EC 1.1.5.2) (Glucose|
           dehydrogenase [pyrroloquinoline-quinone])
          Length = 796

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 346 FLIFPFIW---AIPESLVTAELSTAMPGNGGFVVWA 444
           +LI PF+W    IP S   A L  A+  +GG + WA
Sbjct: 103 WLILPFVWRRLVIPASGAVAALVVALLISGGILTWA 138

>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
 Frame = -2

Query: 458 PKARSAQTTKPPF--PGMAVESSAVTSDSGMAQMKGKMRKPSSAKR----GPADCTAGSA 297
           P A S  T  PP   PG +  + +V + +     +G  R P +  +    GPAD   GS 
Sbjct: 491 PTADSPLTASPPATAPGPSAANVSVAATTATPGTRGTARTPPTDPKTHPHGPADAPPGSP 550

Query: 296 P*GPPATSKKMRKMSGTRD 240
              PP       +  G  D
Sbjct: 551 APPPPEHRGGPEEFEGAGD 569

>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan|
           resistance protein)
          Length = 470

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 25/102 (24%)
 Frame = +1

Query: 229 KNKLSLVPLIFLIFFEVAGG-------PYGAEPAVQSAGPLFALLGFLIFPFIWAIPESL 387
           K  +  + LI +  + V GG       P    PA+ SAGPL A + F I     A+P   
Sbjct: 273 KKSIVALGLIEIFIYTVTGGVVYAFVGPEVQSPALLSAGPLLAKVAFGI-----ALPVIF 327

Query: 388 VTAELSTAM----------PGN--------GGFVVWADRAFG 459
           ++  ++T +          P N         G++VW    FG
Sbjct: 328 ISGSINTVVVSRYLIERIWPNNVIRYVNTPAGWMVWLGFDFG 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,446,485
Number of Sequences: 219361
Number of extensions: 455091
Number of successful extensions: 1768
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)