ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 216 5e-53
2gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 216 5e-53
3gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 216 5e-53
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
7dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 60 6e-06
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 6e-06
10emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 60 6e-06
11emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 60 6e-06
12emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 60 6e-06
13ref|XM_479533.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
14ref|NM_004418.2| Homo sapiens dual specificity phosphatase 2 (DU... 42 1.5
15gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence 42 1.5
16gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 42 1.5
17gb|BC007771.2| Homo sapiens dual specificity phosphatase 2, mRNA... 42 1.5
18gb|AF331843.1| Homo sapiens phosphatase mRNA, complete cds 42 1.5
19emb|CR614078.1| full-length cDNA clone CS0DK002YI03 of HeLa cell... 42 1.5
20emb|CR613393.1| full-length cDNA clone CS0DN003YD17 of Adult bra... 42 1.5
21emb|CR609480.1| full-length cDNA clone CS0DK008YG09 of HeLa cell... 42 1.5
22dbj|AK133917.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 42 1.5
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
24gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, comple... 42 1.5
25dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AK106500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
27dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.5
29gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.5
30gb|U23853.1|HSU23853 Human dual-specific phosphoprotein phosphat... 42 1.5
31gb|L11329.1|HUMPAC1 Homo sapiens protein tyrosine phosphatase (P... 42 1.5
32gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.0
33ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
34ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
35gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.0
36gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
37gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.0
38ref|XR_004221.1| PREDICTED: Mus musculus similar to rRNA promote... 40 6.0
39gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
40gb|AC131792.4| Mus musculus BAC clone RP24-468O15 from chromosom... 40 6.0
41gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.0
42gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.0
43gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.0
44gb|AC145213.1| Homo sapiens fosmid clone XXFOS-800837B7 from 7, ... 40 6.0
45gb|AC144434.2| Homo sapiens fosmid clone XXFOS-801207C6 from 7, ... 40 6.0
46emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.0
47emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.0
48emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.0
49emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.0
50emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 6.0
51emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 6.0
52emb|AJ428208.1|MMU428208 Mus musculus mRNA for phosphacan short ... 40 6.0
53gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.0
54gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.0
55gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein gene... 40 6.0
56dbj|AK154459.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.0
57gb|U77931.1|RNU77931 Rattus norvegicus rRNA promoter binding pro... 40 6.0
58gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.0
59gb|DQ248949.1| Taihangia rupestris TrSHP MADS-box protein mRNA, ... 40 6.0
60tpg|BK000964.1| TPA: TPA_exp: Mus musculus ribosomal DNA, comple... 40 6.0
61gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.0
62dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
63dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
64gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complet... 40 6.0
65ref|NM_147136.1| Rattus norvegicus rRNA promoter binding protein... 40 6.0
66gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
67dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
68dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.0
69dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
70dbj|AB114630.1| Mus musculus CNR gene for cadherin-related neuro... 40 6.0
71dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
72dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
73gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.0
74emb|X82564.1|MM45SRRNA M.musculus 45S pre rRNA gene 40 6.0
75gb|AC148014.3| Mus musculus BAC clone RP23-118N15 from 19, compl... 40 6.0
76emb|X00525.1|MMRNA02 Mouse 28S ribosomal RNA 40 6.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  216 bits (109), Expect = 5e-53
 Identities = 190/217 (87%)
 Strand = Plus / Plus

                                                                            
Query: 228      gcggccaggcgtccgacggcgtggtgatcgcgcaggcggacctgcaggggctgcaggcca 287
                |||| ||| |||| ||||||||||||||||||||||| |||||||||||  ||||||| |
Sbjct: 10409718 gcgggcagccgtcggacggcgtggtgatcgcgcaggccgacctgcagggtttgcaggcga 10409777

                                                                            
Query: 288      tccggcaggcgctggtcgacccgcgggggttcctgagcgggtggaacggcacgggcctcg 347
                ||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 10409778 tccggcaagcgctggttgacccgcgcgggttcctgcgcgggtggaacggcacggggctcg 10409837

                                                                            
Query: 348      gcgcctgctccggggagtgggccggcgtcaagtgcgcgcgcggcaaggtcgtcgcgctgc 407
                 ||| |||||||| | |||||||||  ||||||||||||  || ||||| |||||  | |
Sbjct: 10409838 acgcgtgctccggcgggtgggccgggatcaagtgcgcgcaggggaaggtggtcgccatcc 10409897

                                                     
Query: 408      agctgccgttcaagggcctcgccggcgcgctctccga 444
                |||| || |||||||||||||||||||||||||||||
Sbjct: 10409898 agctccccttcaagggcctcgccggcgcgctctccga 10409934



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       tagctagctagcgagctaggtacg 35
                |||||||||||| |||||||||||
Sbjct: 12993753 tagctagctagctagctaggtacg 12993730



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       cctagctagctagcgagcta 29
                ||||||||||||||||||||
Sbjct: 10681683 cctagctagctagcgagcta 10681664
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  216 bits (109), Expect = 5e-53
 Identities = 190/217 (87%)
 Strand = Plus / Plus

                                                                         
Query: 228   gcggccaggcgtccgacggcgtggtgatcgcgcaggcggacctgcaggggctgcaggcca 287
             |||| ||| |||| ||||||||||||||||||||||| |||||||||||  ||||||| |
Sbjct: 66271 gcgggcagccgtcggacggcgtggtgatcgcgcaggccgacctgcagggtttgcaggcga 66330

                                                                         
Query: 288   tccggcaggcgctggtcgacccgcgggggttcctgagcgggtggaacggcacgggcctcg 347
             ||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 66331 tccggcaagcgctggttgacccgcgcgggttcctgcgcgggtggaacggcacggggctcg 66390

                                                                         
Query: 348   gcgcctgctccggggagtgggccggcgtcaagtgcgcgcgcggcaaggtcgtcgcgctgc 407
              ||| |||||||| | |||||||||  ||||||||||||  || ||||| |||||  | |
Sbjct: 66391 acgcgtgctccggcgggtgggccgggatcaagtgcgcgcaggggaaggtggtcgccatcc 66450

                                                  
Query: 408   agctgccgttcaagggcctcgccggcgcgctctccga 444
             |||| || |||||||||||||||||||||||||||||
Sbjct: 66451 agctccccttcaagggcctcgccggcgcgctctccga 66487
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03,
              from chromosome 3, complete sequence
          Length = 125800

 Score =  216 bits (109), Expect = 5e-53
 Identities = 190/217 (87%)
 Strand = Plus / Plus

                                                                          
Query: 228    gcggccaggcgtccgacggcgtggtgatcgcgcaggcggacctgcaggggctgcaggcca 287
              |||| ||| |||| ||||||||||||||||||||||| |||||||||||  ||||||| |
Sbjct: 123184 gcgggcagccgtcggacggcgtggtgatcgcgcaggccgacctgcagggtttgcaggcga 123243

                                                                          
Query: 288    tccggcaggcgctggtcgacccgcgggggttcctgagcgggtggaacggcacgggcctcg 347
              ||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 123244 tccggcaagcgctggttgacccgcgcgggttcctgcgcgggtggaacggcacggggctcg 123303

                                                                          
Query: 348    gcgcctgctccggggagtgggccggcgtcaagtgcgcgcgcggcaaggtcgtcgcgctgc 407
               ||| |||||||| | |||||||||  ||||||||||||  || ||||| |||||  | |
Sbjct: 123304 acgcgtgctccggcgggtgggccgggatcaagtgcgcgcaggggaaggtggtcgccatcc 123363

                                                   
Query: 408    agctgccgttcaagggcctcgccggcgcgctctccga 444
              |||| || |||||||||||||||||||||||||||||
Sbjct: 123364 agctccccttcaagggcctcgccggcgcgctctccga 123400
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  216 bits (109), Expect = 5e-53
 Identities = 190/217 (87%)
 Strand = Plus / Plus

                                                                            
Query: 228      gcggccaggcgtccgacggcgtggtgatcgcgcaggcggacctgcaggggctgcaggcca 287
                |||| ||| |||| ||||||||||||||||||||||| |||||||||||  ||||||| |
Sbjct: 10407819 gcgggcagccgtcggacggcgtggtgatcgcgcaggccgacctgcagggtttgcaggcga 10407878

                                                                            
Query: 288      tccggcaggcgctggtcgacccgcgggggttcctgagcgggtggaacggcacgggcctcg 347
                ||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct: 10407879 tccggcaagcgctggttgacccgcgcgggttcctgcgcgggtggaacggcacggggctcg 10407938

                                                                            
Query: 348      gcgcctgctccggggagtgggccggcgtcaagtgcgcgcgcggcaaggtcgtcgcgctgc 407
                 ||| |||||||| | |||||||||  ||||||||||||  || ||||| |||||  | |
Sbjct: 10407939 acgcgtgctccggcgggtgggccgggatcaagtgcgcgcaggggaaggtggtcgccatcc 10407998

                                                     
Query: 408      agctgccgttcaagggcctcgccggcgcgctctccga 444
                |||| || |||||||||||||||||||||||||||||
Sbjct: 10407999 agctccccttcaagggcctcgccggcgcgctctccga 10408035



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 12       tagctagctagcgagctaggtacg 35
                |||||||||||| |||||||||||
Sbjct: 12990528 tagctagctagctagctaggtacg 12990505



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       cctagctagctagcgagcta 29
                ||||||||||||||||||||
Sbjct: 10679784 cctagctagctagcgagcta 10679765
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 417544 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 417603

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 417604 ggcaaggtcgtcgc 417617
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 358583 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 358642

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 358643 ggcaaggtcgtcgc 358656
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>dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G09, full
           insert sequence
          Length = 1938

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 329 tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
           ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 270 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 329

                         
Query: 389 ggcaaggtcgtcgc 402
           ||||||||||||||
Sbjct: 330 ggcaaggtcgtcgc 343
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 358583 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 358642

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 358643 ggcaaggtcgtcgc 358656
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 417544 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 417603

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 417604 ggcaaggtcgtcgc 417617
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 150595 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 150654

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 150655 ggcaaggtcgtcgc 150668
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 329   tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
             ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 65901 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 65960

                           
Query: 389   ggcaaggtcgtcgc 402
             ||||||||||||||
Sbjct: 65961 ggcaaggtcgtcgc 65974
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                          
Query: 329    tggaacggcacgggcctcggcgcctgctccggggagtgggccggcgtcaagtgcgcgcgc 388
              ||||||| ||| |||||||||||||||||||| |  |||| |||| |||||||||  |  
Sbjct: 129228 tggaacgacaccggcctcggcgcctgctccggcgcatgggtcggcatcaagtgcgtccag 129169

                            
Query: 389    ggcaaggtcgtcgc 402
              ||||||||||||||
Sbjct: 129168 ggcaaggtcgtcgc 129155
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>ref|XM_479533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1261

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 211 ctcggcgtcgccggctcgcggccag 235
           ||||||||||||||| |||||||||
Sbjct: 620 ctcggcgtcgccggcgcgcggccag 644
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>ref|NM_004418.2| Homo sapiens dual specificity phosphatase 2 (DUSP2), mRNA
          Length = 1702

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 653 gacctgcaggggctgcaggcc 673
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>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence
          Length = 125927

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 423 gcctcgccggcgcgctctccg 443
           |||||||||||||||||||||
Sbjct: 896 gcctcgccggcgcgctctccg 916
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>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 423    gcctcgccggcgcgctctccg 443
              |||||||||||||||||||||
Sbjct: 189648 gcctcgccggcgcgctctccg 189668
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>gb|BC007771.2| Homo sapiens dual specificity phosphatase 2, mRNA (cDNA clone
           MGC:12703 IMAGE:4297852), complete cds
          Length = 1684

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 630 gacctgcaggggctgcaggcc 650
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>gb|AF331843.1| Homo sapiens phosphatase mRNA, complete cds
          Length = 1461

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 298 gacctgcaggggctgcaggcc 318
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>emb|CR614078.1| full-length cDNA clone CS0DK002YI03 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 639 gacctgcaggggctgcaggcc 659
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>emb|CR613393.1| full-length cDNA clone CS0DN003YD17 of Adult brain of Homo sapiens
           (human)
          Length = 1628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 641 gacctgcaggggctgcaggcc 661
to top
>emb|CR609480.1| full-length cDNA clone CS0DK008YG09 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1523

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 627 gacctgcaggggctgcaggcc 647
to top
>dbj|AK133917.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730522K16 product:hypothetical
            protein, full insert sequence
          Length = 2507

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 306  acccgcgggggttcctgagcgggtggaac 334
            ||||||||||||||| ||||||| |||||
Sbjct: 1382 acccgcgggggttccggagcgggaggaac 1410
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 211      ctcggcgtcgccggctcgcggccag 235
                ||||||||||||||| |||||||||
Sbjct: 28706502 ctcggcgtcgccggcgcgcggccag 28706526
to top
>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 266   gacctgcaggggctgcaggcc 286
             |||||||||||||||||||||
Sbjct: 22655 gacctgcaggggctgcaggcc 22635
to top
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1205_F02
          Length = 112862

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 211   ctcggcgtcgccggctcgcggccag 235
             ||||||||||||||| |||||||||
Sbjct: 14063 ctcggcgtcgccggcgcgcggccag 14087
to top
>dbj|AK106500.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E10, full
           insert sequence
          Length = 1261

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 211 ctcggcgtcgccggctcgcggccag 235
           ||||||||||||||| |||||||||
Sbjct: 620 ctcggcgtcgccggcgcgcggccag 644
to top
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1409_C08
          Length = 90673

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 211   ctcggcgtcgccggctcgcggccag 235
             ||||||||||||||| |||||||||
Sbjct: 81672 ctcggcgtcgccggcgcgcggccag 81696
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 333     acggcacgggcctcggcgcct 353
               |||||||||||||||||||||
Sbjct: 1790565 acggcacgggcctcggcgcct 1790545
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 174    tcacgctcgcgctgtcactgctggt 198
              |||||||||||||||| ||||||||
Sbjct: 681667 tcacgctcgcgctgtcgctgctggt 681691
to top
>gb|U23853.1|HSU23853 Human dual-specific phosphoprotein phosphatase (PAC1) gene, complete
            cds
          Length = 2296

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 266  gacctgcaggggctgcaggcc 286
            |||||||||||||||||||||
Sbjct: 1124 gacctgcaggggctgcaggcc 1144
to top
>gb|L11329.1|HUMPAC1 Homo sapiens protein tyrosine phosphatase (PAC-1) mRNA, complete
           cds
          Length = 1709

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 gacctgcaggggctgcaggcc 286
           |||||||||||||||||||||
Sbjct: 653 gacctgcaggggctgcaggcc 673
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     atccggcaggcgctggtcga 306
               ||||||||||||||||||||
Sbjct: 2475584 atccggcaggcgctggtcga 2475565
to top
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 284 gccatccggcaggcgctggtcgacccgc 311
           |||||| |||||| ||||||||||||||
Sbjct: 231 gccatcaggcaggggctggtcgacccgc 258
to top
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 284 gccatccggcaggcgctggtcgacccgc 311
           |||||| |||||| ||||||||||||||
Sbjct: 137 gccatcaggcaggggctggtcgacccgc 164
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tcgcgcaggcggacctgcag 274
              ||||||||||||||||||||
Sbjct: 472905 tcgcgcaggcggacctgcag 472924
to top
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03,
              complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ggtcgtcgcgctgcagctgc 413
              ||||||||||||||||||||
Sbjct: 133215 ggtcgtcgcgctgcagctgc 133196
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     gcgcgcggcaaggtcgtcgc 402
               ||||||||||||||||||||
Sbjct: 1326465 gcgcgcggcaaggtcgtcgc 1326484
to top
>ref|XR_004221.1| PREDICTED: Mus musculus similar to rRNA promoter binding protein
           (LOC673388), mRNA
          Length = 1051

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 307 cccgcgggggttcctgagcgggtggaac 334
           |||||||||||||| ||||||| |||||
Sbjct: 745 cccgcgggggttccggagcgggaggaac 718
to top
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092G21, complete sequence
          Length = 151267

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   ggtcgtcgcgctgcagctgc 413
             ||||||||||||||||||||
Sbjct: 42470 ggtcgtcgcgctgcagctgc 42451
to top
>gb|AC131792.4| Mus musculus BAC clone RP24-468O15 from chromosome 19, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aatgggtgtgtggaggagca 164
              ||||||||||||||||||||
Sbjct: 107392 aatgggtgtgtggaggagca 107411
to top
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cctagctagctagcgagcta 29
             ||||||||||||||||||||
Sbjct: 98597 cctagctagctagcgagcta 98578
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     ggccatccggcaggcgctgg 302
               ||||||||||||||||||||
Sbjct: 4837285 ggccatccggcaggcgctgg 4837266
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 379    gtgcgcgcgcggcaaggtcgtcgcgctg 406
              |||||||| ||||||| |||||||||||
Sbjct: 873509 gtgcgcgcccggcaagatcgtcgcgctg 873536
to top
>gb|AC145213.1| Homo sapiens fosmid clone XXFOS-800837B7 from 7, complete sequence
          Length = 41488

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atggcaccaatgggtgtgtg 156
             ||||||||||||||||||||
Sbjct: 40969 atggcaccaatgggtgtgtg 40988
to top
>gb|AC144434.2| Homo sapiens fosmid clone XXFOS-801207C6 from 7, complete sequence
          Length = 39019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atggcaccaatgggtgtgtg 156
             ||||||||||||||||||||
Sbjct: 35210 atggcaccaatgggtgtgtg 35229
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     ggctgcaggccatccggcag 295
               ||||||||||||||||||||
Sbjct: 2569695 ggctgcaggccatccggcag 2569714
to top
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    ccgacggcgtggtgatcgcg 259
              ||||||||||||||||||||
Sbjct: 242357 ccgacggcgtggtgatcgcg 242376
to top
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   gacctgcaggggctgcaggc 285
             ||||||||||||||||||||
Sbjct: 91651 gacctgcaggggctgcaggc 91632
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     gcgcgcggcaaggtcgtcgc 402
               ||||||||||||||||||||
Sbjct: 2643871 gcgcgcggcaaggtcgtcgc 2643890
to top
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    cgacggcgtggtgatcgcgc 260
              ||||||||||||||||||||
Sbjct: 127313 cgacggcgtggtgatcgcgc 127294
to top
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    cactgctggtcctcctgctg 208
              ||||||||||||||||||||
Sbjct: 186930 cactgctggtcctcctgctg 186911
to top
>emb|AJ428208.1|MMU428208 Mus musculus mRNA for phosphacan short isoform (RPTP-beta gene)
          Length = 3784

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 307  cccgcgggggttcctgagcgggtggaac 334
            |||||||||||||| ||||||| |||||
Sbjct: 2403 cccgcgggggttccggagcgggaggaac 2376
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     ggcaggcgctggtcgacccg 310
               ||||||||||||||||||||
Sbjct: 5457713 ggcaggcgctggtcgacccg 5457694



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ccgacggcgtggtgatcgcg 259
               ||||||||||||||||||||
Sbjct: 5376784 ccgacggcgtggtgatcgcg 5376803
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 317     ttcctgagcgggtggaacgg 336
               ||||||||||||||||||||
Sbjct: 3011176 ttcctgagcgggtggaacgg 3011157
to top
>gb|AF474141.1| Oryza sativa typical A-type R2R3 Myb protein gene, complete cds
          Length = 9589

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   cctagctagctagcgagcta 29
            ||||||||||||||||||||
Sbjct: 4193 cctagctagctagcgagcta 4212
to top
>dbj|AK154459.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630036A16
            product:hypothetical protein, full insert sequence
          Length = 4754

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 307  cccgcgggggttcctgagcgggtggaac 334
            |||||||||||||| ||||||| |||||
Sbjct: 1142 cccgcgggggttccggagcgggaggaac 1169
to top
>gb|U77931.1|RNU77931 Rattus norvegicus rRNA promoter binding protein mRNA, complete cds
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 307 cccgcgggggttcctgagcgggtggaac 334
           |||||||||||||| ||||||| |||||
Sbjct: 362 cccgcgggggttccggagcgggaggaac 335
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    cctcgccggcgcgctctccg 443
              ||||||||||||||||||||
Sbjct: 300603 cctcgccggcgcgctctccg 300622
to top
>gb|DQ248949.1| Taihangia rupestris TrSHP MADS-box protein mRNA, complete cds
          Length = 958

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 11  ctagctagctagcgagctaggtac 34
           ||||||||||||| ||||||||||
Sbjct: 820 ctagctagctagctagctaggtac 843
to top
>tpg|BK000964.1| TPA: TPA_exp: Mus musculus ribosomal DNA, complete repeating unit
          Length = 45309

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 307   cccgcgggggttcctgagcgggtggaac 334
             |||||||||||||| ||||||| |||||
Sbjct: 11020 cccgcgggggttccggagcgggaggaac 11047
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    gcgcgcggcaaggtcgtcgc 402
              ||||||||||||||||||||
Sbjct: 116347 gcgcgcggcaaggtcgtcgc 116328
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 284      gccatccggcaggcgctggtcgacccgc 311
                |||||| |||||| ||||||||||||||
Sbjct: 21576046 gccatcaggcaggggctggtcgacccgc 21576019
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 394      ggtcgtcgcgctgcagctgc 413
                ||||||||||||||||||||
Sbjct: 19120572 ggtcgtcgcgctgcagctgc 19120553
to top
>gb|AC092535.4| Homo sapiens BAC clone RP11-20I20 from 4, complete sequence
          Length = 190462

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  cctgcaggggctgcaggcca 287
            ||||||||||||||||||||
Sbjct: 6693 cctgcaggggctgcaggcca 6712
to top
>ref|NM_147136.1| Rattus norvegicus rRNA promoter binding protein (LOC257642), mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 307 cccgcgggggttcctgagcgggtggaac 334
           |||||||||||||| ||||||| |||||
Sbjct: 362 cccgcgggggttccggagcgggaggaac 335
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    tagctagctagcgagctaggtacg 35
             |||||||||||| |||||||||||
Sbjct: 71451 tagctagctagctagctaggtacg 71428
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 240     ccgacggcgtggtgatcgcgcagg 263
               |||||||||||||||| |||||||
Sbjct: 7224182 ccgacggcgtggtgatggcgcagg 7224159
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 378     agtgcgcgcgcggcaaggtc 397
               ||||||||||||||||||||
Sbjct: 5591168 agtgcgcgcgcggcaaggtc 5591187
to top
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0708B04
          Length = 170523

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 284   gccatccggcaggcgctggtcgacccgc 311
             |||||| |||||| ||||||||||||||
Sbjct: 36220 gccatcaggcaggggctggtcgacccgc 36193
to top
>dbj|AB114630.1| Mus musculus CNR gene for cadherin-related neuronal receptor,
            complete cds
          Length = 10521

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 307  cccgcgggggttcctgagcgggtggaac 334
            |||||||||||||| ||||||| |||||
Sbjct: 9289 cccgcgggggttccggagcgggaggaac 9316
to top
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full
           insert sequence
          Length = 2158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 284 gccatccggcaggcgctggtcgacccgc 311
           |||||| |||||| ||||||||||||||
Sbjct: 137 gccatcaggcaggggctggtcgacccgc 164
to top
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full
           insert sequence
          Length = 2671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 284 gccatccggcaggcgctggtcgacccgc 311
           |||||| |||||| ||||||||||||||
Sbjct: 231 gccatcaggcaggggctggtcgacccgc 258
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    gcgcgcggcaaggtcgtcgc 402
              ||||||||||||||||||||
Sbjct: 501865 gcgcgcggcaaggtcgtcgc 501846
to top
>emb|X82564.1|MM45SRRNA M.musculus 45S pre rRNA gene
          Length = 22118

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 307   cccgcgggggttcctgagcgggtggaac 334
             |||||||||||||| ||||||| |||||
Sbjct: 16655 cccgcgggggttccggagcgggaggaac 16682
to top
>gb|AC148014.3| Mus musculus BAC clone RP23-118N15 from 19, complete sequence
          Length = 222061

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    aatgggtgtgtggaggagca 164
              ||||||||||||||||||||
Sbjct: 148033 aatgggtgtgtggaggagca 148014
to top
>emb|X00525.1|MMRNA02 Mouse 28S ribosomal RNA
          Length = 4712

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 307  cccgcgggggttcctgagcgggtggaac 334
            |||||||||||||| ||||||| |||||
Sbjct: 2897 cccgcgggggttccggagcgggaggaac 2924


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,544,421
Number of Sequences: 3902068
Number of extensions: 2544421
Number of successful extensions: 66592
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64461
Number of HSP's gapped (non-prelim): 2131
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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