ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast77c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 264 bits (133), Expect = 2e-67 Identities = 154/161 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 50803 agcggccgtgggggaagtgggcggcggagatccgcgacccgcacaaggccgcccgcgtct 50862 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 50863 ggctcggcaccttcgagaccgccgaggccgcggcgcgcgcctacgacgaggccgcgctcc 50922 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 50923 gcttccgcggcagccgcgccaagctcaacttccccgaggac 50963
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 264 bits (133), Expect = 2e-67 Identities = 154/161 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 21264197 agcggccgtgggggaagtgggcggcggagatccgcgacccgcacaaggccgcccgcgtct 21264256 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | Sbjct: 21264257 ggctcggcaccttcgagaccgccgaggccgcggcgcgcgcctacgacgaggccgcgctcc 21264316 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21264317 gcttccgcggcagccgcgccaagctcaacttccccgaggac 21264357 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 148 gcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgagacg 207 |||||||||||||| |||||| |||| | ||||| ||||||||||| ||||| ||| Sbjct: 24299743 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 24299684 Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||| || |||||||||||||||| ||| |||| Sbjct: 24299683 gccgaggaggccgcgcgcgcctacgacgccgcggcgc 24299647 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 17103169 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 17103228 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 17103229 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 17103268 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggac 165 |||||||||||||||||| |||||||||||||||||| Sbjct: 21884574 agcggccgtggggcaagtacgcggcggagatccgggac 21884611 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||| || ||||||||||||||||||||| Sbjct: 24283411 agcggccgtggggccggtacgcggcggagatccgggacccg 24283371 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 217 gcggcgcgcgcctacgacgacgccgcgctgcgcttccgcggc 258 ||||||||||||||||||| || |||| ||| ||||||||| Sbjct: 27082964 gcggcgcgcgcctacgacgtggcggcgcagcggttccgcggc 27083005 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 136 tggggcaagtgggcggcggagatccgggacccgc 169 ||||| ||||||| ||||||||||||||| |||| Sbjct: 16466071 tgggggaagtgggtggcggagatccgggagccgc 16466038 Score = 40.1 bits (20), Expect = 4.8 Identities = 53/64 (82%) Strand = Plus / Minus Query: 180 gcgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||| ||||||||||||| ||| || | ||| |||| |||| |||||||||| ||| Sbjct: 28279790 gcgcgtgtggctcggcacctacgactcgccggagaccgccgcgcacgcctacgaccgcgc 28279731 Query: 240 cgcg 243 |||| Sbjct: 28279730 cgcg 28279727 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgagg 214 ||||||||||||||||| || ||||||| Sbjct: 14530134 tggctcggcaccttcgacaccgccgagg 14530161 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||| || ||||||||||||| |||||| Sbjct: 14530076 gcggccgtggggcaggttctcggcggagatccgcgacccg 14530115
>ref|NM_190766.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1161 Score = 248 bits (125), Expect = 1e-62 Identities = 152/161 (94%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 509 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgggtgt 568 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| | Sbjct: 569 ggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcgctcc 628 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ggttccgcggcagccgcgccaagctcaacttccccgaggac 669 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 4 cagagctcggacacccagggccagagcgcggcgaccatgga 44 |||||||||||||||||| || |||||||||||||||||| Sbjct: 388 cagagctcggacacccagagcgcgagcgcggcgaccatgga 428
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 248 bits (125), Expect = 1e-62 Identities = 152/161 (94%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 37583945 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgggtgt 37583886 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| | Sbjct: 37583885 ggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcgctcc 37583826 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 37583825 ggttccgcggcagccgcgccaagctcaacttccccgaggac 37583785 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 11767164 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtct 11767223 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 11767224 ggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 11767280 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 220 gcgcgcgcctacgacgacgccgcgctgcgcttccgcggc 258 |||||||||||||||| |||||||| ||||||||||||| Sbjct: 28613895 gcgcgcgcctacgacgtcgccgcgcagcgcttccgcggc 28613857 Score = 60.0 bits (30), Expect = 5e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Minus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcggcgcgcgtctgg 189 ||||||||||||||| |||||||||||||| |||||| | |||| |||||||||| Sbjct: 26728058 ggccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgt-gcgcgtctgg 26728000 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||||||||||| || ||||||| || ||||||| |||||| |||| Sbjct: 26727999 ctcggcaccttcgacaccgccgaggaggccgcgcgcgtgtacgacaacgc 26727950 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 4 cagagctcggacacccagggccagagcgcggcgaccatgga 44 |||||||||||||||||| || |||||||||||||||||| Sbjct: 37584066 cagagctcggacacccagagcgcgagcgcggcgaccatgga 37584026 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 1746456 gtggggcaagtgggcggcggagatccg 1746482 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||| |||| |||||||||||||| |||||| Sbjct: 6813534 gcggccgtgggggaagtacgcggcggagatccgcgacccg 6813573 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 211 gaggccgcggcgcgcgcctacgacgacgccgcgctgcgcttccg 254 ||||| ||||||||||||||||||| || ||||| |||||||| Sbjct: 2153617 gaggcggcggcgcgcgcctacgacgtggcggcgctccgcttccg 2153660 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||| ||| ||||| |||| || || ||||||||||||| |||||| Sbjct: 33760506 tggctcggtacctacgacacggcagaggaggccgcccgcgcctacgacgccgccgc 33760561 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgagg 214 |||||||||||||||| |||||||||| Sbjct: 31561605 tggctcggcaccttcggcacggccgagg 31561632 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||| |||| || ||||||||||| |||||| Sbjct: 31561544 gcggccgtgggggaagtacgccgcggagatccgtgacccg 31561583 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||| || |||||||||||| ||||||| Sbjct: 29517626 gccgaggccgccgcccgcgcctacgacaccgccgcg 29517661 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 gcgctgcgcttccgcggcagccgcgcca 268 ||||||| ||||||||||||| |||||| Sbjct: 27500113 gcgctgcccttccgcggcagcggcgcca 27500140
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 248 bits (125), Expect = 1e-62 Identities = 152/161 (94%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 44419 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgggtgt 44360 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| | Sbjct: 44359 ggctcggcacgttcgagacggcggaggccgcggcgcgggcctacgacgaggccgcgctcc 44300 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 44299 ggttccgcggcagccgcgccaagctcaacttccccgaggac 44259 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 4 cagagctcggacacccagggccagagcgcggcgaccatgga 44 |||||||||||||||||| || |||||||||||||||||| Sbjct: 44540 cagagctcggacacccagagcgcgagcgcggcgaccatgga 44500
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3437430 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgt 3437371 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| || | Sbjct: 3437370 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctcc 3437311 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 |||||||||||||||||||||||||||||||||||||| Sbjct: 3437310 gcttccgcggcagccgcgccaagctcaacttccccgag 3437273 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||| ||||||||||||||||| || ||||||| || || |||||||||||||| ||| Sbjct: 24236653 cgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggcc 24236712 Query: 241 gc 242 || Sbjct: 24236713 gc 24236714
>dbj|AK107125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B10, full insert sequence Length = 1521 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 531 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgt 590 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| || | Sbjct: 591 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctcc 650 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 |||||||||||||||||||||||||||||||||||||| Sbjct: 651 gcttccgcggcagccgcgccaagctcaacttccccgag 688
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3437375 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgt 3437316 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| || | Sbjct: 3437315 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctcc 3437256 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 |||||||||||||||||||||||||||||||||||||| Sbjct: 3437255 gcttccgcggcagccgcgccaagctcaacttccccgag 3437218 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||| ||||||||||||||||| || ||||||| || || |||||||||||||| ||| Sbjct: 24164859 cgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggcc 24164918 Query: 241 gc 242 || Sbjct: 24164919 gc 24164920
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 94485 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgt 94544 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| || | Sbjct: 94545 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctcc 94604 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 |||||||||||||||||||||||||||||||||||||| Sbjct: 94605 gcttccgcggcagccgcgccaagctcaacttccccgag 94642
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 116483 agcggccgtgggggaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtgt 116424 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| || | Sbjct: 116423 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacggcgccgccctcc 116364 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 |||||||||||||||||||||||||||||||||||||| Sbjct: 116363 gcttccgcggcagccgcgccaagctcaacttccccgag 116326
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 26354 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgt 26413 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 26414 ggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctcc 26473 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26474 gcttccgcggctgccgcgccaagctcaacttccccgaggac 26514
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 125655 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgt 125714 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 125715 ggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctcc 125774 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 125775 gcttccgcggctgccgcgccaagctcaacttccccgaggac 125815
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 3288631 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgt 3288572 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 3288571 ggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctcc 3288512 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3288511 gcttccgcggctgccgcgccaagctcaacttccccgaggac 3288471
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 3297344 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgcgtgt 3297285 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 3297284 ggctcggcaccttcgacaccgccgaggccgccgcgcgcgcctacgacgacgccgccctcc 3297225 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3297224 gcttccgcggctgccgcgccaagctcaacttccccgaggac 3297184
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 196 bits (99), Expect = 3e-47 Identities = 141/155 (90%) Strand = Plus / Minus Query: 133 ccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctc 192 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 20510854 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 20510795 Query: 193 ggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgcttc 252 ||||||||| || ||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 20510794 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 20510735 Query: 253 cgcggcagccgcgccaagctcaacttccccgagga 287 ||||| |||||||||||||||||||||||||||| Sbjct: 20510734 cgcgggcgccgcgccaagctcaacttccccgagga 20510700 Score = 188 bits (95), Expect = 8e-45 Identities = 143/159 (89%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 20518879 gcggccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctg 20518820 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||| || |||||| |||||||||||||||||||| ||||| ||| || Sbjct: 20518819 gctgggcaccttccgcaccaccgaggacgcggcgcgcgcctacgacgccgccgtgctccg 20518760 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgagga 287 ||||||||| |||||||||||||||||||||||||||| Sbjct: 20518759 cttccgcgggcgccgcgccaagctcaacttccccgagga 20518721 Score = 168 bits (85), Expect = 8e-39 Identities = 139/157 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 19007000 gcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgcgtctg 19006941 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||||| || ||||||||||| || ||||||||||||||||||||| || Sbjct: 19006940 gctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcgctccg 19006881 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgag 285 |||| ||| | ||||||||||||||||||||| Sbjct: 19006880 cttcaagggcgccaaggccaagctcaacttccccgag 19006844 Score = 85.7 bits (43), Expect = 9e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| ||||| || ||||||| ||| |||||||||||||||| ||||||||| Sbjct: 32223302 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgcgctc 32223243 Query: 247 cgcttccgcggcagccgcgccaagctcaacttccc 281 ||||||||| |||||||||||||||||||| Sbjct: 32223242 gagttccgcggccagcgcgccaagctcaacttccc 32223208 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgc 169 ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 32223359 cggccgtgggggaagtgggcggcggagatccgcgacccgc 32223320 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 26543474 tggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 26543533 Query: 196 accttc 201 |||||| Sbjct: 26543534 accttc 26543539 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 26441458 agcggccgtggggcaagttcgcggcggagatcagggacccg 26441418 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 31668103 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 31668150 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 26475552 agcggccgtggggcaagttcgcggcggagatccgcgaccc 26475591 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || |||||||||||||| |||||| ||| |||||| || | Sbjct: 4959462 agcggccgtgggggaggtacgcggcggagatccgcgacccggcgaagaaggcgcgggtgt 4959403 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||| || |||| ||| | ||||||| ||| |||||||||||||||| Sbjct: 4959402 ggctggggacctacgactccgccgaggacgccgcgcgcgcctacgacg 4959355 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||| ||||| | || |||||||| || ||||||||||||| ||||||| Sbjct: 3164923 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgcg 3164865 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 26569765 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 26569824 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 26569825 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 26569874 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 208 gccgaggccgcggcgcgcgcctacgacg 235 |||||||| ||||||||||||||||||| Sbjct: 32350223 gccgaggcggcggcgcgcgcctacgacg 32350196 Score = 46.1 bits (23), Expect = 0.078 Identities = 41/47 (87%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacga 233 ||||| |||||||| ||||||||||||| || ||||| |||||||| Sbjct: 5689068 tggctgggcacctttgagacggccgaggaggctgcgcgagcctacga 5689114 Score = 44.1 bits (22), Expect = 0.31 Identities = 43/50 (86%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacga 236 ||||| ||||| ||||||||||| |||| |||||||| || |||||||| Sbjct: 33939188 tggctgggcacgttcgagacggcggaggatgcggcgcgggcgtacgacga 33939139 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gccgaggccgcggcgcgcgcc 228 ||||||||||||||||||||| Sbjct: 29487459 gccgaggccgcggcgcgcgcc 29487479 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||| || |||||||||||| |||||||| Sbjct: 18943600 gcggccgtggggccggtacgcggcggagatcagggacccg 18943561
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 196 bits (99), Expect = 3e-47 Identities = 141/155 (90%) Strand = Plus / Minus Query: 133 ccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctc 192 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 6412 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 6353 Query: 193 ggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgcttc 252 ||||||||| || ||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 6352 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 6293 Query: 253 cgcggcagccgcgccaagctcaacttccccgagga 287 ||||| |||||||||||||||||||||||||||| Sbjct: 6292 cgcgggcgccgcgccaagctcaacttccccgagga 6258 Score = 188 bits (95), Expect = 8e-45 Identities = 143/159 (89%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 14437 gcggccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctg 14378 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||| || |||||| |||||||||||||||||||| ||||| ||| || Sbjct: 14377 gctgggcaccttccgcaccaccgaggacgcggcgcgcgcctacgacgccgccgtgctccg 14318 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgagga 287 ||||||||| |||||||||||||||||||||||||||| Sbjct: 14317 cttccgcgggcgccgcgccaagctcaacttccccgagga 14279
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 196 bits (99), Expect = 3e-47 Identities = 141/155 (90%) Strand = Plus / Minus Query: 133 ccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctc 192 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 153278 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 153219 Query: 193 ggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgcttc 252 ||||||||| || ||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 153218 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 153159 Query: 253 cgcggcagccgcgccaagctcaacttccccgagga 287 ||||| |||||||||||||||||||||||||||| Sbjct: 153158 cgcgggcgccgcgccaagctcaacttccccgagga 153124
>dbj|AK107852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A10, full insert sequence Length = 992 Score = 196 bits (99), Expect = 3e-47 Identities = 141/155 (90%) Strand = Plus / Plus Query: 133 ccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctc 192 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 399 ccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctggctg 458 Query: 193 ggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgcttc 252 ||||||||| || ||||||| |||||||||||||||||||| ||||||||| |||||| Sbjct: 459 ggcaccttccgcaccgccgaggacgcggcgcgcgcctacgacgccgccgcgctacgcttc 518 Query: 253 cgcggcagccgcgccaagctcaacttccccgagga 287 ||||| |||||||||||||||||||||||||||| Sbjct: 519 cgcgggcgccgcgccaagctcaacttccccgagga 553
>ref|XM_466117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 188 bits (95), Expect = 8e-45 Identities = 143/159 (89%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 294 gcggccgtggggcaagtgggcggcggagatcagggacccgaggaaggcggcgcgcgtctg 353 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||| || |||||| |||||||||||||||||||| ||||| ||| || Sbjct: 354 gctgggcaccttccgcaccaccgaggacgcggcgcgcgcctacgacgccgccgtgctccg 413 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgagga 287 ||||||||| |||||||||||||||||||||||||||| Sbjct: 414 cttccgcgggcgccgcgccaagctcaacttccccgagga 452
>ref|NM_185233.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 174 bits (88), Expect = 1e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| || || Sbjct: 204 gcggccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtg 263 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 |||||| || |||| || ||||||| |||||||||||||||||||| ||| ||||| || Sbjct: 264 gctcgggacgttcgccaccgccgaggacgcggcgcgcgcctacgacgccgcggcgctccg 323 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||| | ||||||| ||||||||||||||||||| Sbjct: 324 cttccgcggggggcgcgccaggctcaacttccccgaggac 363
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 174 bits (88), Expect = 1e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| || || Sbjct: 71224 gcggccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtg 71165 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 |||||| || |||| || ||||||| |||||||||||||||||||| ||| ||||| || Sbjct: 71164 gctcgggacgttcgccaccgccgaggacgcggcgcgcgcctacgacgccgcggcgctccg 71105 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||| | ||||||| ||||||||||||||||||| Sbjct: 71104 cttccgcggggggcgcgccaggctcaacttccccgaggac 71065
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 174 bits (88), Expect = 1e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||| |||||||||||| ||||||||| || || Sbjct: 21257750 gcggccgtgggggaagtgggcggcggagatcagggacccgcacagggcggcgcgggtgtg 21257691 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 |||||| || |||| || ||||||| |||||||||||||||||||| ||| ||||| || Sbjct: 21257690 gctcgggacgttcgccaccgccgaggacgcggcgcgcgcctacgacgccgcggcgctccg 21257631 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgaggac 288 ||||||||| | ||||||| ||||||||||||||||||| Sbjct: 21257630 cttccgcggggggcgcgccaggctcaacttccccgaggac 21257591 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||| |||||||||| || |||||||||||||| |||||| || | |||||| || | Sbjct: 30973293 agcgcccgtggggcaggtacgcggcggagatccgcgacccggccaggaaggcgcgggtgt 30973352 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| | Sbjct: 30973353 ggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctcc 30973412 Query: 248 gcttccgcgg 257 ||||||||| Sbjct: 30973413 acttccgcgg 30973422 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || ||||||||||||||||||||| ||| ||||||||| | Sbjct: 34168187 agcggccgtgggggaggttcgcggcggagatccgggacccggcgaagcgggcgcgcgtgt 34168128 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| ||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 34168127 ggctcggcacctacgactccgccgaggccgcggcgcgggcctacgacgtcgccgcgc 34168071 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 33065401 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 33065342 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 33065341 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 33065302 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| ||||||||||||||||| |||||||| | ||||||||| | || | Sbjct: 19661435 agcggccatgggggaagtgggcggcggagataagggacccgaagaaggcggcgagggtgt 19661494 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||| || || ||||| ||||| |||| ||| || |||||||||||| || ||||| | Sbjct: 19661495 ggctggggacgttcgacacggcggaggacgccgccatcgcctacgacgaggcggcgctcc 19661554 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 | ||| || | | ||||||||||||||||||||| Sbjct: 19661555 ggttcaaggggaccaaggccaagctcaacttccccgag 19661592 Score = 63.9 bits (32), Expect = 3e-07 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaag---gcggcgcgcg 184 |||||||||||||||||| |||||||||||||||||||| |||| | ||||||| Sbjct: 27345727 agcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgcgcg 27345668 Query: 185 tctggctcggcaccttcgagacggccgagg 214 | ||||||||||| ||||| || ||||||| Sbjct: 27345667 tgtggctcggcacgttcgacaccgccgagg 27345638 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 28794356 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 28794398 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||||||||| || | ||| | ||||| ||||||||||| Sbjct: 27496891 tggggcaagtgggtgtcggagatccgggagccccggaagaagtcgcgcatctggctcggc 27496950 Query: 196 accttcgagacggccgag 213 || ||||| || |||||| Sbjct: 27496951 acgttcgacaccgccgag 27496968 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||| |||| |||||||||||||| |||||| Sbjct: 27384306 agcggccgtgggggaagttcgcggcggagatccgcgacccg 27384346 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||| |||| |||||||||||||| |||||| Sbjct: 27373490 agcggccgtgggggaagttcgcggcggagatccgcgacccg 27373530 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||||| | |||||||||||||| |||||| Sbjct: 10369822 gcggccgtggggcaaattcgcggcggagatccgcgacccg 10369783 Score = 46.1 bits (23), Expect = 0.078 Identities = 62/75 (82%) Strand = Plus / Plus Query: 139 ggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcacc 198 |||||||||| | ||||||||||||| |||| ||||| ||| ||||||||||||| Sbjct: 28787239 ggcaagtgggtgtcggagatccgggagccgcggaaggctcgccgcatctggctcggcacg 28787298 Query: 199 ttcgagacggccgag 213 ||| |||||||||| Sbjct: 28787299 ttcccgacggccgag 28787313 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||| || |||||||||||| ||||||| Sbjct: 25995589 gccgaggccgccgcctgcgcctacgacgccgccgcg 25995624
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 168 bits (85), Expect = 8e-39 Identities = 139/157 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 62321 gcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgcgtctg 62262 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||||| || ||||||||||| || ||||||||||||||||||||| || Sbjct: 62261 gctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcgctccg 62202 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgag 285 |||| ||| | ||||||||||||||||||||| Sbjct: 62201 cttcaagggcgccaaggccaagctcaacttccccgag 62165
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 168 bits (85), Expect = 8e-39 Identities = 139/157 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12521 gcggccgtggggcaagtgggcggcggagatccgggaccccaacaaggcggcgcgcgtctg 12462 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcg 248 ||| ||||||||||| || ||||||||||| || ||||||||||||||||||||| || Sbjct: 12461 gctgggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgccgcgctccg 12402 Query: 249 cttccgcggcagccgcgccaagctcaacttccccgag 285 |||| ||| | ||||||||||||||||||||| Sbjct: 12401 cttcaagggcgccaaggccaagctcaacttccccgag 12365
>gb|BT018001.1| Zea mays clone EL01N0526G07.c mRNA sequence Length = 1002 Score = 139 bits (70), Expect = 7e-30 Identities = 115/130 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||| |||||||||| || ||||||||||||||||||||| || | ||||||||| | Sbjct: 150 agcgcccgtggggcaggttcgcggcggagatccgggacccggccaggaaggcgcgcgtgt 209 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| | Sbjct: 210 ggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacgccgccgcgctcc 269 Query: 248 gcttccgcgg 257 ||||||||| Sbjct: 270 acttccgcgg 279
>gb|DQ102384.2| Hordeum vulgare root abundant factor (RAF) gene, promoter region and complete cds Length = 3958 Score = 129 bits (65), Expect = 7e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 2923 agcggccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtct 2982 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||||| |||||||| | || || || |||||||||| |||||| | | Sbjct: 2983 ggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtc 3042 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccga 284 || |||| |||||| |||||| ||||||||||||| Sbjct: 3043 gcctccgtggcagcaaggccaaggtcaacttccccga 3079
>gb|DQ102383.2| Hordeum vulgare root abundant factor (RAF) mRNA, complete cds Length = 1394 Score = 129 bits (65), Expect = 7e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 359 agcggccgtggggcaagtgggcggcggagatccgcgacccgcacaagggcacccgcgtct 418 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||||| |||||||| | || || || |||||||||| |||||| | | Sbjct: 419 ggctcggcacgttcgacacggccgatgatgccgcccgggcctacgacgtcgccgcccgtc 478 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccga 284 || |||| |||||| |||||| ||||||||||||| Sbjct: 479 gcctccgtggcagcaaggccaaggtcaacttccccga 515
>ref|XM_483546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1323 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 467 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgt 526 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| Sbjct: 527 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgc 581
>gb|AY341827.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP29 mRNA, complete cds Length = 1853 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 1167 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgt 1226 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| Sbjct: 1227 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgc 1281
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 26887398 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgt 26887457 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| Sbjct: 26887458 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgc 26887512 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 19540966 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 19541024 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 208 gccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||| |||| |||||||||||||||| Sbjct: 20543140 gccgaggccgccgcgctcgcctacgacgacgcc 20543172 Score = 48.1 bits (24), Expect = 0.020 Identities = 48/56 (85%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| | ||||| ||||| ||||||||| |||||| |||| Sbjct: 27317796 tctggctcggcacgttcgacgccgccgacgccgccgcgcgcgcccacgacgccgcc 27317741 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccg 161 |||| |||||||| |||||||||||||||||| Sbjct: 25943131 cggctgtggggcaggtgggcggcggagatccg 25943162 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 ||||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 23347105 agcggccatgggggaagtgggctgcggagatccgcgaccc 23347144 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 19540917 tggggcaagtgggtggcggagatccgg 19540943 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 caagctcaacttccccgaggac 288 |||||||||||||||||||||| Sbjct: 18114236 caagctcaacttccccgaggac 18114257 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 gaggccgcggcgcgcgcctacgacg 235 ||||||| ||||||||||||||||| Sbjct: 20155818 gaggccgtggcgcgcgcctacgacg 20155842 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 186 ctggctcggcaccttcgagacggccgagg 214 |||||||||||||||||| || ||||||| Sbjct: 4298106 ctggctcggcaccttcgacaccgccgagg 4298078 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cgcgccaagctcaacttccc 281 |||||||||||||||||||| Sbjct: 23347239 cgcgccaagctcaacttccc 23347258
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 150188 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgt 150247 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| Sbjct: 150248 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgc 150302
>dbj|AK064252.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C06, full insert sequence Length = 1323 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| || | Sbjct: 467 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgt 526 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||| Sbjct: 527 ggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgc 581
>ref|XM_479493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 228 gcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggcgcgcgcgtctg 287 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 288 gctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgac 333
>ref|XM_473848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||| |||||||||| || |||||||||||||| |||||| || | |||||| || | Sbjct: 92 agcgcccgtggggcaggtacgcggcggagatccgcgacccggccaggaaggcgcgggtgt 151 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| | Sbjct: 152 ggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctcc 211 Query: 248 gcttccgcgg 257 ||||||||| Sbjct: 212 acttccgcgg 221
>gb|AY297447.1| Oryza sativa (japonica cultivar-group) AP2 domain transcription factor EREBP mRNA, complete cds Length = 885 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 272 gcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggcgcgcgcgtctg 331 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 332 gctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgac 377
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||| |||||||||| || |||||||||||||| |||||| || | |||||| || | Sbjct: 70666 agcgcccgtggggcaggtacgcggcggagatccgcgacccggccaggaaggcgcgggtgt 70725 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| | Sbjct: 70726 ggctcggcaccttcgacaccgccgaggccgcggcgcgcgcctacgacagcgccgcgctcc 70785 Query: 248 gcttccgcgg 257 ||||||||| Sbjct: 70786 acttccgcgg 70795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 28487780 gcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggcgcgcgcgtctg 28487721 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 28487720 gctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgac 28487675 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 23198480 tggctcggcaccttcgagaccgccgacgccgccgcgcgcgcctacgacgaggccgcgc 23198423 Score = 73.8 bits (37), Expect = 3e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggaccc---gcacaaggcggcgcgcgt 185 |||||||||||| | |||||||||||||||||| ||||| | | || | | |||||| Sbjct: 7172734 gcggccgtgggggaggtgggcggcggagatccgcgaccccaaggagaacgggcggcgcgt 7172675 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||| || ||||||||||| || |||||||||||||||| Sbjct: 7172674 gtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 7172620 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 25388218 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 25388159 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 25388158 ggctcggcacgttcg 25388144 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||||| |||||||||||||||||||| ||| ||||||||| | |||||||| Sbjct: 12773331 tggctcggcacgttcgagacggccgaggccgccgcgatggcctacgaccaggccgcgct 12773273 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||||||| |||||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 5626257 tggctcggcacgttcgagaccgccgaggaggctgcgcgggcctacgacgaggccgc 5626312 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggac 165 |||||||||||||| || |||||||||||||||||| Sbjct: 12794529 gcggccgtggggcaggttcgcggcggagatccgggac 12794493 Score = 48.1 bits (24), Expect = 0.020 Identities = 33/36 (91%) Strand = Plus / Minus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacc 166 |||||||||| ||||||| |||||||||||| |||| Sbjct: 11892919 ggccgtgggggaagtgggaggcggagatccgcgacc 11892884
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 53532 gcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggcgcgcgcgtctg 53473 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 53472 gctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgac 53427
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 115 bits (58), Expect = 1e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 45321 gcggccgtgggggaagtgggcggcggagatccgcgacccggcgaagggcgcgcgcgtctg 45262 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 45261 gctcggcaccttcgccaccgccgaggcggcggcccgcgcctacgac 45216
>ref|NM_183713.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 164 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtct 223 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 224 ggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 280
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 106332 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtct 106391 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 106392 ggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 106448
>dbj|AK111775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G11, full insert sequence Length = 909 Score = 113 bits (57), Expect = 4e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| |||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 295 agcggccgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtct 354 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 355 ggctcggcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgc 411
>ref|XM_474281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || ||||||||||||||||||||| ||| ||||||||| | Sbjct: 59 agcggccgtgggggaggttcgcggcggagatccgggacccggcgaagcgggcgcgcgtgt 118 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| ||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 119 ggctcggcacctacgactccgccgaggccgcggcgcgggcctacgacgtcgccgcgc 175
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || ||||||||||||||||||||| ||| ||||||||| | Sbjct: 79569 agcggccgtgggggaggttcgcggcggagatccgggacccggcgaagcgggcgcgcgtgt 79510 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| ||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 79509 ggctcggcacctacgactccgccgaggccgcggcgcgggcctacgacgtcgccgcgc 79453
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || ||||||||||||||||||||| ||| ||||||||| | Sbjct: 84495 agcggccgtgggggaggttcgcggcggagatccgggacccggcgaagcgggcgcgcgtgt 84436 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| ||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 84435 ggctcggcacctacgactccgccgaggccgcggcgcgggcctacgacgtcgccgcgc 84379
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || ||||||||||||||||||||| ||| ||||||||| | Sbjct: 18865 agcggccgtgggggaggttcgcggcggagatccgggacccggcgaagcgggcgcgcgtgt 18806 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| ||| | ||||||||||||||||| |||||||||| |||||||| Sbjct: 18805 ggctcggcacctacgactccgccgaggccgcggcgcgggcctacgacgtcgccgcgc 18749
>ref|XM_470558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 347 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 406 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 407 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 466 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 467 gcctccgcggcagcaaggccaaggtcaacttccccg 502
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggc 190 |||||||||| || ||||||||||||||||| |||||| ||||| || |||||||||| Sbjct: 12688240 ggccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggc 12688299 Query: 191 tcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgct 250 |||||||||||| || |||||||| || ||||| ||||||||| |||||| | ||| Sbjct: 12688300 tcggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgca 12688359 Query: 251 tccgcggcagccgcgccaagctcaacttcccc 282 ||||||||| | |||||| ||||||||||| Sbjct: 12688360 tccgcggcaccaaggccaaggtcaacttcccc 12688391 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 4331654 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 4331595 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 4331594 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 4331535 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 4331534 gcctccgcggcagcaaggccaaggtcaacttccccg 4331499 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 4354763 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 4354704 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 4354703 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 4354649 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| | ||| | ||||||||| Sbjct: 4349706 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctgg 4349647 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||| || ||||||||||| || | ||||||||||| |||||| Sbjct: 4349646 ctcggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgc 4349594 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||| ||||||| ||||||| || |||||||| || || ||||| | ||||| ||| Sbjct: 3966673 agcggacgtgggggaagtgggtagccgagatccgcgagcccaacaagcggacgcgcctct 3966732 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||| |||||| || ||||||| ||||||| |||||||||||| ||||||| Sbjct: 3966733 ggctcggctccttcgccaccgccgaggaggcggcgctcgcctacgacgaggccgcgc 3966789 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 2782072 agcggccgtggggcaagttcgcggcggagatccgcgacccg 2782112 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 211 gaggccgcggcgcgcgcctacgacg 235 ||||||||||||||||||||||||| Sbjct: 8609071 gaggccgcggcgcgcgcctacgacg 8609047 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccg 161 ||||||| |||||||||| |||||||||||||| Sbjct: 35998173 agcggccatggggcaagtttgcggcggagatccg 35998140 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 136 tggggcaagtgggcggcggagatccg 161 ||||||||||||| |||||||||||| Sbjct: 4762775 tggggcaagtgggtggcggagatccg 4762750 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 ||||||||||||| | || |||||||||||||| ||||| Sbjct: 33889313 agcggccgtgggggaggttcgcggcggagatccgcgaccc 33889274 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgagg 214 ||||||||||||||||| || ||||||| Sbjct: 33889254 tggctcggcaccttcgacaccgccgagg 33889227
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 94843 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 94902 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 94903 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 94962 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 94963 gcctccgcggcagcaaggccaaggtcaacttccccg 94998 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 71734 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 71793 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 71794 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 71848 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| | ||| | ||||||||| Sbjct: 76791 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctgg 76850 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||| || ||||||||||| || | ||||||||||| |||||| Sbjct: 76851 ctcggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgc 76903
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggc 190 |||||||||| || ||||||||||||||||| |||||| ||||| || |||||||||| Sbjct: 12685003 ggccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggc 12685062 Query: 191 tcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgct 250 |||||||||||| || |||||||| || ||||| ||||||||| |||||| | ||| Sbjct: 12685063 tcggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgca 12685122 Query: 251 tccgcggcagccgcgccaagctcaacttcccc 282 ||||||||| | |||||| ||||||||||| Sbjct: 12685123 tccgcggcaccaaggccaaggtcaacttcccc 12685154 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 4331769 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 4331710 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 4331709 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 4331650 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 4331649 gcctccgcggcagcaaggccaaggtcaacttccccg 4331614 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 4354878 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 4354819 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 4354818 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 4354764 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| | ||| | ||||||||| Sbjct: 4349821 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctgg 4349762 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||| || ||||||||||| || | ||||||||||| |||||| Sbjct: 4349761 ctcggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgc 4349709 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||| ||||||| ||||||| || |||||||| || || ||||| | ||||| ||| Sbjct: 3966784 agcggacgtgggggaagtgggtagccgagatccgcgagcccaacaagcggacgcgcctct 3966843 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||| |||||| || ||||||| ||||||| |||||||||||| ||||||| Sbjct: 3966844 ggctcggctccttcgccaccgccgaggaggcggcgctcgcctacgacgaggccgcgc 3966900 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 2782183 agcggccgtggggcaagttcgcggcggagatccgcgacccg 2782223 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 211 gaggccgcggcgcgcgcctacgacg 235 ||||||||||||||||||||||||| Sbjct: 8606906 gaggccgcggcgcgcgcctacgacg 8606882 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccg 161 ||||||| |||||||||| |||||||||||||| Sbjct: 36088247 agcggccatggggcaagtttgcggcggagatccg 36088214 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 136 tggggcaagtgggcggcggagatccg 161 ||||||||||||| |||||||||||| Sbjct: 4762890 tggggcaagtgggtggcggagatccg 4762865 Score = 40.1 bits (20), Expect = 4.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 ||||||||||||| | || |||||||||||||| ||||| Sbjct: 33979785 agcggccgtgggggaggttcgcggcggagatccgcgaccc 33979746 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgagg 214 ||||||||||||||||| || ||||||| Sbjct: 33979726 tggctcggcaccttcgacaccgccgagg 33979699
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggc 190 |||||||||| || ||||||||||||||||| |||||| ||||| || |||||||||| Sbjct: 42693 ggccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggc 42752 Query: 191 tcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgct 250 |||||||||||| || |||||||| || ||||| ||||||||| |||||| | ||| Sbjct: 42753 tcggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgca 42812 Query: 251 tccgcggcagccgcgccaagctcaacttcccc 282 ||||||||| | |||||| ||||||||||| Sbjct: 42813 tccgcggcaccaaggccaaggtcaacttcccc 42844
>dbj|AK111414.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G01, full insert sequence Length = 1164 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggc 190 |||||||||| || ||||||||||||||||| |||||| ||||| || |||||||||| Sbjct: 360 ggccgtgggggaaatgggcggcggagatccgcgacccggccaagggcgcccgcgtctggc 419 Query: 191 tcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgct 250 |||||||||||| || |||||||| || ||||| ||||||||| |||||| | ||| Sbjct: 420 tcggcaccttcgccaccgccgaggctgccgcgcgggcctacgaccgcgccgcccgccgca 479 Query: 251 tccgcggcagccgcgccaagctcaacttcccc 282 ||||||||| | |||||| ||||||||||| Sbjct: 480 tccgcggcaccaaggccaaggtcaacttcccc 511
>dbj|AK101949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075D23, full insert sequence Length = 1575 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 440 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 499 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 500 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 559 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 560 gcctccgcggcagcaaggccaaggtcaacttccccg 595
>dbj|AK060527.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F02, full insert sequence Length = 1249 Score = 103 bits (52), Expect = 4e-19 Identities = 130/156 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 441 agcggccatgggggaagtgggcggcggagatccgcgacccgcacaagggcacgcgcgtct 500 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||||||||| ||| | || | |||| || || ||||||||||||| || |||| | Sbjct: 501 ggctcggcacgttcaacaccccggaggaggccgcacgcgcctacgacgtcgaggcgcgcc 560 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccg 283 || ||||||||||| |||||| |||||||||||| Sbjct: 561 gcctccgcggcagcaaggccaaggtcaacttccccg 596
>gb|AY831395.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 4 (BIERF4) mRNA, complete cds Length = 1214 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 368 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 427 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 428 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 482
>ref|XM_470561.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 990 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 307 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 366 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 367 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 421
>gb|AC090056.2|AC090056 Oryza sativa chromosome 9 clone PAC0663H05, complete sequence Length = 161873 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 94548 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 94607 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 94608 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 94658 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 78215 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 78274 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 78275 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 78322
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 6335110 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 6335051 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 6335050 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 6335000 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 6351443 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 6351384 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 6351383 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 6351336 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 20103531 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 20103476 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| |||| || |||||||| ||||||||||| |||||| |||||||||| Sbjct: 20095478 tggctcggcacgttcgccaccgccgaggcggcggcgcgcgcgcacgacgccgccgcgctg 20095419 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||||| ||||||||| Sbjct: 12163616 tctggctcggcaccttcgacacagccgaggaggcggcgcttgcctacgac 12163665 Score = 48.1 bits (24), Expect = 0.020 Identities = 36/40 (90%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgc 169 ||||||||||| |||||||| |||||||| || ||||||| Sbjct: 17251917 cggccgtgggggaagtgggcagcggagatacgcgacccgc 17251956 Score = 46.1 bits (23), Expect = 0.078 Identities = 53/63 (84%) Strand = Plus / Minus Query: 178 gcgcgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgac 237 |||||| | ||||||||||| | || || |||||||||||||||||||| |||||| | Sbjct: 20099495 gcgcgcctgtggctcggcacgtacgtcaccgccgaggccgcggcgcgcgcgcacgacgcc 20099436 Query: 238 gcc 240 ||| Sbjct: 20099435 gcc 20099433 Score = 44.1 bits (22), Expect = 0.31 Identities = 46/54 (85%) Strand = Plus / Minus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||| ||||| ||||||||||| || ||||||| || || |||||||||||| Sbjct: 22520458 cgcgtgtggctgggcaccttcgacacagccgaggaggccgctcgcgcctacgac 22520405 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 208 gccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||| || ||||||||||||| |||| Sbjct: 19564025 gccgaggccgccgcccgcgcctacgacgccgcc 19563993
>dbj|AP005705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0453B09 Length = 173688 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 1187 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 1128 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 1127 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 1077 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 17520 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 17461 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 17460 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 17413
>dbj|AP006758.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0663H05 Length = 161938 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 67389 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 67330 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 67329 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 67279 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 83722 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 83663 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 83662 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 83615
>dbj|AK119553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C04, full insert sequence Length = 1193 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 371 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 430 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 431 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 485
>dbj|AK106163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B04, full insert sequence Length = 1193 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 371 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 430 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 431 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 485
>dbj|AK105922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A05, full insert sequence Length = 1190 Score = 93.7 bits (47), Expect = 4e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 368 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcatccgcgtctgg 427 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||| | ||||||||||| |||| |||||||||||||||||||| Sbjct: 428 ctcggcaccttcaccaacgccgaggccgccgcgctcgcctacgacgacgccgcgc 482
>dbj|AK072749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139A06, full insert sequence Length = 1132 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 493 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 552 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 553 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 603
>dbj|AK065344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007H05, full insert sequence Length = 1516 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 423 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 482 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 483 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 533
>dbj|AK060090.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A04, full insert sequence Length = 1241 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | ||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 335 agcggccgtgggggaggtgggcgtcggagatccgcgaccccgtcaagggcatccgcgtct 394 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 |||||||||||||||| || ||||||| ||| ||||||||||||||||||| Sbjct: 395 ggctcggcaccttcgacaccgccgagggcgccgcgcgcgcctacgacgacg 445
>gb|AY105544.1| Zea mays PCO132999 mRNA sequence Length = 1121 Score = 93.7 bits (47), Expect = 4e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||||||||||||||||||||||||||||||||| ||||| |||| | |||||||| Sbjct: 349 agcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaagggcgtgcgcgtct 408 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||| | || ||||||||||| |||||||| |||||| Sbjct: 409 ggctcggcacctaccccaccgccgaggccgccgcgcgcgcgtacgac 455
>ref|NM_196730.1| Oryza sativa (japonica cultivar-group) putative retrovirus-related pol polyprotein from transposon TNT (OSJNBa0094K20.5), mRNA Length = 375 Score = 91.7 bits (46), Expect = 1e-15 Identities = 95/109 (87%), Gaps = 3/109 (2%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcgg--cgcgcgt 185 ||||||||||||||||| |||||||||||||| |||||| | | ||||| ||||||| Sbjct: 54 gcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcggcggggcgcgcgt 113 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||||||| || ||||||| |||||||| ||||||||| Sbjct: 114 ctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 162
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 91.7 bits (46), Expect = 1e-15 Identities = 95/109 (87%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcgg--cgcgcgt 185 ||||||||||||||||| |||||||||||||| |||||| | | ||||| ||||||| Sbjct: 15550005 gcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcggcggggcgcgcgt 15549946 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||||||| || ||||||| |||||||| ||||||||| Sbjct: 15549945 ctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 15549897 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccggga-cccgcacaaggcggcgcgcgtc 186 ||||||||||||| |||||||||||||||||||| || |||| | ||| | ||||||| Sbjct: 12475925 agcggccgtgggggaagtgggcggcggagatccgcgaccccgtgcgcggc-gtgcgcgtc 12475983 Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||||| || |||||| |||| |||||||||||||||| |||||| Sbjct: 12475984 tggctcggtaccttccccaccgccgagtccgccgcgcgcgcctacgacgccgccgc 12476039 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 21693912 agcggccgtggggcaagtacgcggcggagatccgggacccg 21693952 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| |||| |||||||| ||||| || || ||||||||||||||| Sbjct: 22155511 gtggggcaagtgggtggcgtagatccggctgccgcagaaccgggtgcgcgtctggctcgg 22155452 Query: 195 cacct 199 ||||| Sbjct: 22155451 cacct 22155447 Score = 42.1 bits (21), Expect = 1.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||| ||||||| | |||||||||| || |||| ||| | ||||| |||| Sbjct: 21580624 gcgggcgtgggggaagtgggtgtcggagatccgcgagccgcggaagaagtcgcgcatctg 21580565 Query: 189 gctcggcac 197 ||||||||| Sbjct: 21580564 gctcggcac 21580556 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgcggcgcgcgcctacgacg 235 |||||||||||||||||||| Sbjct: 13347998 cgcggcgcgcgcctacgacg 13348017
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 91.7 bits (46), Expect = 1e-15 Identities = 95/109 (87%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcgg--cgcgcgt 185 ||||||||||||||||| |||||||||||||| |||||| | | ||||| ||||||| Sbjct: 37371 gcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcggcggggcgcgcgt 37312 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||||||| || ||||||| |||||||| ||||||||| Sbjct: 37311 ctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 37263
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 91.7 bits (46), Expect = 1e-15 Identities = 95/109 (87%), Gaps = 3/109 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcgg--cgcgcgt 185 ||||||||||||||||| |||||||||||||| |||||| | | ||||| ||||||| Sbjct: 15558246 gcggccgtggggcaagttcgcggcggagatccgcgacccggagcgcggcggggcgcgcgt 15558187 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||||||||||||| || ||||||| |||||||| ||||||||| Sbjct: 15558186 ctggctcggcaccttcgacaccgccgaggaggcggcgcgtgcctacgac 15558138 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccggga-cccgcacaaggcggcgcgcgtc 186 ||||||||||||| |||||||||||||||||||| || |||| | ||| | ||||||| Sbjct: 12483265 agcggccgtgggggaagtgggcggcggagatccgcgaccccgtgcgcggc-gtgcgcgtc 12483323 Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||||| || |||||| |||| |||||||||||||||| |||||| Sbjct: 12483324 tggctcggtaccttccccaccgccgagtccgccgcgcgcgcctacgacgccgccgc 12483379 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 21705575 agcggccgtggggcaagtacgcggcggagatccgggacccg 21705615 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| |||| |||||||| ||||| || || ||||||||||||||| Sbjct: 22167574 gtggggcaagtgggtggcgtagatccggctgccgcagaaccgggtgcgcgtctggctcgg 22167515 Query: 195 cacct 199 ||||| Sbjct: 22167514 cacct 22167510 Score = 42.1 bits (21), Expect = 1.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||| ||||||| | |||||||||| || |||| ||| | ||||| |||| Sbjct: 21592287 gcgggcgtgggggaagtgggtgtcggagatccgcgagccgcggaagaagtcgcgcatctg 21592228 Query: 189 gctcggcac 197 ||||||||| Sbjct: 21592227 gctcggcac 21592219 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgcggcgcgcgcctacgacg 235 |||||||||||||||||||| Sbjct: 13355338 cgcggcgcgcgcctacgacg 13355357
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 89.7 bits (45), Expect = 6e-15 Identities = 58/61 (95%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 228 ctacgacgacgccgcgctgcgcttccgcggcagccgcgccaagctcaacttccccgagga 287 ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 42748 ctacgacgacgccgc-ctccgcttccgcggctgccgcgccaagctcaacttccccgagga 42690 Query: 288 c 288 | Sbjct: 42689 c 42689
>gb|BT017632.1| Zea mays clone EL01N0437C06.c mRNA sequence Length = 759 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||||||||||||||||||||||||||||||||| ||||| |||| | |||||||| Sbjct: 119 agcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaagggcgtgcgcgtct 178 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 |||||||||||| | || || |||||||| |||||||| |||||| ||||||| Sbjct: 179 ggctcggcacctaccccaccgctgaggccgccgcgcgcgcgtacgaccgcgccgcg 234
>gb|AY672654.1| Zea mays ethylene-responsive factor-like protein 1 (ERF1) mRNA, complete cds Length = 1023 Score = 87.7 bits (44), Expect = 2e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 |||||||||||||||||||||||||||||||||| ||||| |||| | ||||||| Sbjct: 313 agcggccgtggggcaagtgggcggcggagatccgcgaccccgtgaagggcgtccgcgtct 372 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 |||||||||||| | || ||||||||||| |||||||| |||||| ||||||| Sbjct: 373 ggctcggcacctaccccaccgccgaggccgccgcgcgcgcgtacgaccgcgccgcg 428
>ref|XM_467948.1| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 85.7 bits (43), Expect = 9e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| ||||| || ||||||| ||| |||||||||||||||| ||||||||| Sbjct: 527 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgcgctc 586 Query: 247 cgcttccgcggcagccgcgccaagctcaacttccc 281 ||||||||| |||||||||||||||||||| Sbjct: 587 gagttccgcggccagcgcgccaagctcaacttccc 621 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgc 169 ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 470 cggccgtgggggaagtgggcggcggagatccgcgacccgc 509
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 85.7 bits (43), Expect = 9e-14 Identities = 82/95 (86%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| ||||| || ||||||| ||| |||||||||||||||| ||||||||| Sbjct: 67315 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgcgctc 67256 Query: 247 cgcttccgcggcagccgcgccaagctcaacttccc 281 ||||||||| |||||||||||||||||||| Sbjct: 67255 gagttccgcggccagcgcgccaagctcaacttccc 67221 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgc 169 ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 67372 cggccgtgggggaagtgggcggcggagatccgcgacccgc 67333
>dbj|AK107146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-D09, full insert sequence Length = 911 Score = 85.7 bits (43), Expect = 9e-14 Identities = 82/95 (86%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| ||||| || ||||||| ||| |||||||||||||||| ||||||||| Sbjct: 527 tggctcggcacgttcgacaccgccgaggacgccgcgcgcgcctacgacgtcgccgcgctc 586 Query: 247 cgcttccgcggcagccgcgccaagctcaacttccc 281 ||||||||| |||||||||||||||||||| Sbjct: 587 gagttccgcggccagcgcgccaagctcaacttccc 621 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgc 169 ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 470 cggccgtgggggaagtgggcggcggagatccgcgacccgc 509
>ref|XM_478817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 226 tggctcggcaccttcgagaccgccgacgccgccgcgcgcgcctacgacgaggccgcgc 283
>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1562_B11 Length = 112144 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 61394 tggctcggcaccttcgagaccgccgacgccgccgcgcgcgcctacgacgaggccgcgc 61337
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 83.8 bits (42), Expect = 4e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 142664 tggctcggcaccttcgagaccgccgacgccgccgcgcgcgcctacgacgaggccgcgc 142607
>ref|XM_470560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 130 cggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctgg 189 ||||||||||| |||||||||||||||||||| ||||| | ||| | ||||||||| Sbjct: 295 cggccgtgggggaagtgggcggcggagatccgcgaccccgtcgagggcgtccgcgtctgg 354 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||| || ||||||||||| || | ||||||||||| |||||| Sbjct: 355 ctcggcacgttcgccaccgccgaggccgccgcccacgcctacgacgccgccgc 407
>ref|XM_474119.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 702 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 207 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 266 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 267 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 306
>ref|NM_196288.1| Oryza sativa (japonica cultivar-group) putative protein containing AP2 DNA binding domain (OSJNBb0061I18.6), mRNA Length = 927 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccggga-cccgcacaaggcggcgcgcgtc 186 ||||||||||||| |||||||||||||||||||| || |||| | ||| | ||||||| Sbjct: 329 agcggccgtgggggaagtgggcggcggagatccgcgaccccgtgcgcggc-gtgcgcgtc 387 Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||||| || |||||| |||| |||||||||||||||| |||||| Sbjct: 388 tggctcggtaccttccccaccgccgagtccgccgcgcgcgcctacgacgccgccgc 443
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccggga-cccgcacaaggcggcgcgcgtc 186 ||||||||||||| |||||||||||||||||||| || |||| | ||| | ||||||| Sbjct: 28250 agcggccgtgggggaagtgggcggcggagatccgcgaccccgtgcgcggc-gtgcgcgtc 28192 Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||||| || |||||| |||| |||||||||||||||| |||||| Sbjct: 28191 tggctcggtaccttccccaccgccgagtccgccgcgcgcgcctacgacgccgccgc 28136
>dbj|AK110269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C07, full insert sequence Length = 1260 Score = 79.8 bits (40), Expect = 6e-12 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccggga-cccgcacaaggcggcgcgcgtc 186 ||||||||||||| |||||||||||||||||||| || |||| | ||| | ||||||| Sbjct: 369 agcggccgtgggggaagtgggcggcggagatccgcgaccccgtgcgcggc-gtgcgcgtc 427 Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 |||||||| |||||| || |||||| |||| |||||||||||||||| |||||| Sbjct: 428 tggctcggtaccttccccaccgccgagtccgccgcgcgcgcctacgacgccgccgc 483
>dbj|AK099333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003O11, full insert sequence Length = 1173 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 292 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 351 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 352 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 391
>dbj|AK061095.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A04, full insert sequence Length = 1216 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 323 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 382 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 383 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 422
>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete sequence Length = 43586 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 3992 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 3933 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 3932 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 3893
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||||||||||| ||||||||||||||| ||||||||| | ||||| ||||||| || Sbjct: 74982 gtggggcaagtgggtggcggagatccgggagccgcacaagcggacgcgcatctggctggg 74923 Query: 195 caccttcgagacggccgaggccgcggcgcgcgcctacgac 234 | | || |||| ||| ||| |||||||||||||||||| Sbjct: 74922 gtcgtacgcgacgcccgtggcggcggcgcgcgcctacgac 74883
>gb|DQ353853.1| Triticum aestivum AP2 domain transcription factor TaDREB3 mRNA, complete cds Length = 1004 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 179 cgcgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacg 238 ||||| |||||||||||||||||| ||| |||||||||| ||||||||| |||||| || Sbjct: 293 cgcgcatctggctcggcaccttcgccacgcccgaggccgccgcgcgcgcccacgacgtcg 352 Query: 239 ccgcgct 245 ||||||| Sbjct: 353 ccgcgct 359
>ref|NM_185471.1| Oryza sativa (japonica cultivar-group), mRNA Length = 645 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| ||||||||| |||||| |||||||| Sbjct: 176 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcgccgcgc 235 Query: 245 t 245 | Sbjct: 236 t 236
>ref|NM_186683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 73.8 bits (37), Expect = 3e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggaccc---gcacaaggcggcgcgcgt 185 |||||||||||| | |||||||||||||||||| ||||| | | || | | |||||| Sbjct: 231 gcggccgtgggggaggtgggcggcggagatccgcgaccccaaggagaacgggcggcgcgt 290 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||| || ||||||||||| || |||||||||||||||| Sbjct: 291 gtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 345
>gb|AY327040.1| Oryza sativa (japonica cultivar-group) transcription factor CBF1 mRNA, complete cds Length = 772 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| ||||||||| |||||| |||||||| Sbjct: 203 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcgccgcgc 262 Query: 245 t 245 | Sbjct: 263 t 263
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1433973 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcgccgcgc 1434032 Query: 245 t 245 | Sbjct: 1434033 t 1434033 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||| ||||||| | |||||||| |||| |||| |||| | ||||| |||| Sbjct: 20693093 gcgggcgtgggggaagtgggtgtcggagatcagggagccgcgcaagaagtcgcgcatctg 20693152 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||| ||| |||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 20693153 gctcggcacgttcccgacgcccgagatggcggcgcgcgcgcacgacgccgccgcgct 20693209 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacga 236 ||||||| ||||| ||||||||||| |||| |||||| ||||| |||||||| Sbjct: 4051924 tctggctgggcacgttcgagacggcggaggacgcggcacgcgcgtacgacga 4051975 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||| || |||||||| | ||||||| ||||| |||||||||||||||||||| Sbjct: 28434797 tctggctgggtaccttcgactccgccgaggtggcggcccgcgcctacgacgacgccgc 28434854 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 208 gccgaggccgcggcgcgcgcctacgacg 235 |||||||| ||||||||||||||||||| Sbjct: 5641984 gccgaggcggcggcgcgcgcctacgacg 5642011 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 |||||| |||||||||||||||||||| Sbjct: 5008991 gtgggggaagtgggcggcggagatccg 5009017 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcgg 194 |||||| ||||||| |||||||||||| || ||| ||||| | |||| |||||||||| Sbjct: 3336309 gtgggggaagtgggtggcggagatccgcgagccgaacaagcggtcgcggatctggctcgg 3336368 Query: 195 c 195 | Sbjct: 3336369 c 3336369 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 178 gcgcgcgtctggctcggcaccttcgagacggccgagg 214 |||||||| ||||||||||| ||||| || ||||||| Sbjct: 3067127 gcgcgcgtgtggctcggcacgttcgacaccgccgagg 3067163
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| ||||||||| |||||| |||||||| Sbjct: 41259 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcgccgcgc 41318 Query: 245 t 245 | Sbjct: 41319 t 41319
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 73.8 bits (37), Expect = 3e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| ||||||||| |||||| |||||||| Sbjct: 142512 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcccacgacgtcgccgcgc 142571 Query: 245 t 245 | Sbjct: 142572 t 142572
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 73.8 bits (37), Expect = 3e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggaccc---gcacaaggcggcgcgcgt 185 |||||||||||| | |||||||||||||||||| ||||| | | || | | |||||| Sbjct: 13218 gcggccgtgggggaggtgggcggcggagatccgcgaccccaaggagaacgggcggcgcgt 13159 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||| || ||||||||||| || |||||||||||||||| Sbjct: 13158 gtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 13104
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 73.8 bits (37), Expect = 3e-10 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggaccc---gcacaaggcggcgcgcgt 185 |||||||||||| | |||||||||||||||||| ||||| | | || | | |||||| Sbjct: 199423 gcggccgtgggggaggtgggcggcggagatccgcgaccccaaggagaacgggcggcgcgt 199364 Query: 186 ctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||| || ||||||||||| || |||||||||||||||| Sbjct: 199363 gtggctcggcaccttcgacaccgccgaggccgccgccgccgcctacgacgacgcc 199309
>dbj|AK106057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F09, full insert sequence Length = 1107 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 409 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 468 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 469 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 516
>dbj|AK068688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163J01, full insert sequence Length = 1106 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| ||||||| |||||||||| ||||| ||||| || ||||||| Sbjct: 410 agcggccgtgggggcggtgggcgtcggagatccgcgaccccgtcaagggcgcccgcgtct 469 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||||||||||||||| || |||| | || |||||||||||||||| Sbjct: 470 ggctcggcaccttcgacaccgccgtcgaggccgcgcgcgcctacgacg 517
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 71.9 bits (36), Expect = 1e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||||||||||| |||||||||||| ||||| |||| | ||||||| Sbjct: 180880 agcggccgtggggcaagtgggtggcggagatccgcgaccccgtgaaggacgttcgcgtct 180939 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 |||||||||||| | || ||||||||||| ||||||| |||||| ||||||| Sbjct: 180940 ggctcggcacctaccccaccgccgaggccgccacgcgcgcatacgaccgcgccgcg 180995
>gb|AY781353.1| Triticum aestivum ethylene-responsive element binding protein 2 (EREB2) mRNA, complete cds Length = 1794 Score = 71.9 bits (36), Expect = 1e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggc 190 |||| |||||||| |||||||| |||||||| ||||| ||||| | || ||||||| Sbjct: 662 ggccttggggcaaatgggcggcagagatccgcgaccccgtcaagggcgtccgggtctggc 721 Query: 191 tcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgcgct 250 |||| |||||| | ||||||||||| |||| |||||||||||||||||| | ||| Sbjct: 722 tcggaaccttcccctccgccgaggccgccgcgcacgcctacgacgacgccgcacgcggct 781 Query: 251 tccgcggcagccgcgccaagctcaacttcccc 282 |||||||| | ||||| ||||||||||||| Sbjct: 782 tccgcggcgccaacgccaggctcaacttcccc 813
>gb|AY785903.1| Triticum aestivum cultivar TAM W-101 TaCBF6 (CBF6) mRNA, complete cds Length = 1063 Score = 69.9 bits (35), Expect = 5e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 ||||||||||||||||||| || ||||||||||| ||||||||| |||||| Sbjct: 440 tctggctcggcaccttcgacaccgccgaggccgccgcgcgcgccaacgacg 490
>ref|XM_472341.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| ||||||||||||||||| |||||||| | ||||||||| | || | Sbjct: 215 agcggccatgggggaagtgggcggcggagataagggacccgaagaaggcggcgagggtgt 274 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||| || || ||||| ||||| |||| ||| || |||||||||||| || ||||| | Sbjct: 275 ggctggggacgttcgacacggcggaggacgccgccatcgcctacgacgaggcggcgctcc 334 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 | ||| || | | ||||||||||||||||||||| Sbjct: 335 ggttcaaggggaccaaggccaagctcaacttccccgag 372
>gb|BT017785.1| Zea mays clone EL01N0503H11.c mRNA sequence Length = 1086 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||||||||| ||| |||||||||| ||| ||||| |||||||||| |||||||| Sbjct: 278 tggctcggcacctacgacacggccgaggacgccgcgcgggcctacgacgccgccgcgc 335
>dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C14, full insert sequence Length = 1854 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| ||||||||||||||||| |||||||| | ||||||||| | || | Sbjct: 709 agcggccatgggggaagtgggcggcggagataagggacccgaagaaggcggcgagggtgt 768 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||| || || ||||| ||||| |||| ||| || |||||||||||| || ||||| | Sbjct: 769 ggctggggacgttcgacacggcggaggacgccgccatcgcctacgacgaggcggcgctcc 828 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 | ||| || | | ||||||||||||||||||||| Sbjct: 829 ggttcaaggggaccaaggccaagctcaacttccccgag 866
>gb|AY106969.1| Zea mays PCO114516 mRNA sequence Length = 950 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||||||||| ||| |||||||||| ||| ||||| |||||||||| |||||||| Sbjct: 129 tggctcggcacctacgacacggccgaggacgccgcgcgggcctacgacgccgccgcgc 186
>gb|U91857.1|SHU91857 Stylosanthes hamata ethylene-responsive element binding protein homolog gene, complete cds Length = 1018 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||||||||| || ||||||| ||| ||||| || ||||||| |||| Sbjct: 213 cgcgtctggctcggcaccttcgacaccgccgaggacgcagcgcgtgcatacgacgccgcc 272 Query: 241 gc 242 || Sbjct: 273 gc 274
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| ||||||||||||||||| |||||||| | ||||||||| | || | Sbjct: 112161 agcggccatgggggaagtgggcggcggagataagggacccgaagaaggcggcgagggtgt 112220 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctgc 247 |||| || || ||||| ||||| |||| ||| || |||||||||||| || ||||| | Sbjct: 112221 ggctggggacgttcgacacggcggaggacgccgccatcgcctacgacgaggcggcgctcc 112280 Query: 248 gcttccgcggcagccgcgccaagctcaacttccccgag 285 | ||| || | | ||||||||||||||||||||| Sbjct: 112281 ggttcaaggggaccaaggccaagctcaacttccccgag 112318
>gb|AY785898.1| Sorghum bicolor SbCBF5 (CBF5) mRNA, complete cds Length = 1046 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| || ||||||||||| |||||||| |||||| |||||||| Sbjct: 305 tctggctcggcaccttcgccaccgccgaggccgccgcgcgcgcgcacgacgtcgccgcgc 364 Query: 245 t 245 | Sbjct: 365 t 365
>ref|XM_475484.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 711 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 148 gcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgagacg 207 |||||||||||||| |||||| |||| | ||||| ||||||||||| ||||| ||| Sbjct: 148 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 207 Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||| || |||||||||||||||| ||| |||| Sbjct: 208 gccgaggaggccgcgcgcgcctacgacgccgcggcgc 244
>ref|NM_197761.1| Oryza sativa (japonica cultivar-group) putative ethylene-responsive element binding protein (OSJNBb0089A17.16), mRNA Length = 822 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 284 agcggccgtggggcaagtacgcggcggagatccgggacccg 324
>gb|AY576527.1| Oryza sativa ethylene-responsive element binding factor (EREBP) mRNA, complete cds Length = 1046 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 148 gcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgagacg 207 |||||||||||||| |||||| |||| | ||||| ||||||||||| ||||| ||| Sbjct: 212 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 271 Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||| || |||||||||||||||| ||| |||| Sbjct: 272 gccgaggaggccgcgcgcgcctacgacgccgcggcgc 308
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 148 gcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgagacg 207 |||||||||||||| |||||| |||| | ||||| ||||||||||| ||||| ||| Sbjct: 65479 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 65420 Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||| || |||||||||||||||| ||| |||| Sbjct: 65419 gccgaggaggccgcgcgcgcctacgacgccgcggcgc 65383 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||| || ||||||||||||||||||||| Sbjct: 49147 agcggccgtggggccggtacgcggcggagatccgggacccg 49107
>gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP28 mRNA, complete cds Length = 1145 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 377 agcggccgtggggcaagtacgcggcggagatccgggacccg 417
>gb|AY785858.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF5 (CBF5) mRNA, complete cds Length = 1285 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||| | ||| |||||||||| ||||||||| |||||| |||||||| Sbjct: 266 tctggctcggcacctttgccacgcccgaggccgccgcgcgcgcccacgacgtcgccgcgc 325 Query: 245 t 245 | Sbjct: 326 t 326
>gb|AY785857.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||| | ||| |||||||||| ||||||||| |||||| |||||||| Sbjct: 239 tctggctcggcacctttgccacgcccgaggccgccgcgcgcgcccacgacgtcgccgcgc 298 Query: 245 t 245 | Sbjct: 299 t 299
>gb|AY785856.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||| | ||| |||||||||| ||||||||| |||||| |||||||| Sbjct: 239 tctggctcggcacctttgccacgcccgaggccgccgcgcgcgcccacgacgtcgccgcgc 298 Query: 245 t 245 | Sbjct: 299 t 299
>gb|AY785854.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF5 (CBF5) gene, complete cds Length = 773 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||| | ||| |||||||||| ||||||||| |||||| |||||||| Sbjct: 239 tctggctcggcacctttgccacgcccgaggccgccgcgcgcgcccacgacgtcgccgcgc 298 Query: 245 t 245 | Sbjct: 299 t 299
>gb|AY785855.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 65.9 bits (33), Expect = 8e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||| | ||| |||||||||| ||||||||| |||||| |||||||| Sbjct: 239 tctggctcggcacctttgccacgcccgaggccgccgcgcgcgcccacgacgtcgccgcgc 298 Query: 245 t 245 | Sbjct: 299 t 299
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||| ||||||| ||||||| || |||||||| || || ||||| | ||||| ||| Sbjct: 132695 agcggacgtgggggaagtgggtagccgagatccgcgagcccaacaagcggacgcgcctct 132636 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||| |||||| || ||||||| ||||||| |||||||||||| ||||||| Sbjct: 132635 ggctcggctccttcgccaccgccgaggaggcggcgctcgcctacgacgaggccgcgc 132579
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125816 agcggccgtggggcaagtacgcggcggagatccgggacccg 125856 Score = 42.1 bits (21), Expect = 1.2 Identities = 57/69 (82%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||| ||||||| | |||||||||| || |||| ||| | ||||| |||| Sbjct: 12528 gcgggcgtgggggaagtgggtgtcggagatccgcgagccgcggaagaagtcgcgcatctg 12469 Query: 189 gctcggcac 197 ||||||||| Sbjct: 12468 gctcggcac 12460
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 65.9 bits (33), Expect = 8e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 8595 agcggccgtggggcaagtacgcggcggagatccgggacccg 8635
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 65.9 bits (33), Expect = 8e-08 Identities = 96/117 (82%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||| ||||||| | |||||||| |||| |||| |||| | ||||| |||| Sbjct: 115500 gcgggcgtgggggaagtgggtgtcggagatcagggagccgcgcaagaagtcgcgcatctg 115559 Query: 189 gctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||| ||| |||| ||||| ||||||||||| |||||| ||||||||| Sbjct: 115560 gctcggcacgttcccgacgcccgagatggcggcgcgcgcgcacgacgccgccgcgct 115616
>dbj|AK111755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G02, full insert sequence Length = 1094 Score = 65.9 bits (33), Expect = 8e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 148 gcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgagacg 207 |||||||||||||| |||||| |||| | ||||| ||||||||||| ||||| ||| Sbjct: 256 gcggcggagatccgcgacccggccaagaagagccgcgtgtggctcggcacgttcgacacg 315 Query: 208 gccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 ||||||| || |||||||||||||||| ||| |||| Sbjct: 316 gccgaggaggccgcgcgcgcctacgacgccgcggcgc 352
>ref|XM_475114.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 193 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 252 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 253 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 292
>ref|XM_473403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 63.9 bits (32), Expect = 3e-07 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaag---gcggcgcgcg 184 |||||||||||||||||| |||||||||||||||||||| |||| | ||||||| Sbjct: 473 agcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgcgcg 532 Query: 185 tctggctcggcaccttcgagacggccgagg 214 | ||||||||||| ||||| || ||||||| Sbjct: 533 tgtggctcggcacgttcgacaccgccgagg 562
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 47304 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 47363 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 47364 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 47403
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 96536 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 96595 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 96596 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 96635
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 63.9 bits (32), Expect = 3e-07 Identities = 76/90 (84%), Gaps = 3/90 (3%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaag---gcggcgcgcg 184 |||||||||||||||||| |||||||||||||||||||| |||| | ||||||| Sbjct: 81655 agcggccgtggggcaagttcgcggcggagatccgggaccccgccaagaacggcgcgcgcg 81596 Query: 185 tctggctcggcaccttcgagacggccgagg 214 | ||||||||||| ||||| || ||||||| Sbjct: 81595 tgtggctcggcacgttcgacaccgccgagg 81566 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||| |||| |||||||||||||| |||||| Sbjct: 118902 agcggccgtgggggaagttcgcggcggagatccgcgacccg 118942 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 ||||||||||||| |||| |||||||||||||| |||||| Sbjct: 108086 agcggccgtgggggaagttcgcggcggagatccgcgacccg 108126
>gb|AY323486.1| Oryza sativa (japonica cultivar-group) TSI-1-like protein (si1) mRNA, complete cds Length = 968 Score = 63.9 bits (32), Expect = 3e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 133 ccgtggggcaagtgggcggcggagatccgggacccg-cacaaggcggcgcgcgtctggct 191 ||||||||||||| |||||||||||||| |||||| | ||| | |||||||||||| Sbjct: 357 ccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggc-gtgcgcgtctggct 415 Query: 192 cggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||||||||| || |||||||| || ||||||| |||||| |||| Sbjct: 416 cggcaccttcgacaccgccgaggcggccgcgcgcgtgtacgacaacgc 463
>gb|AY785861.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||||| || ||||||||||| |||||||| |||||| |||| Sbjct: 354 tctggctcggcaccttcgacaccgccgaggccgccgcgcgcgcgaacgacgccgcc 409
>gb|AY785860.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||||||||| || ||||||||||| |||||||| |||||| |||| Sbjct: 354 tctggctcggcaccttcgacaccgccgaggccgccgcgcgcgcgaacgacgccgcc 409
>dbj|AK111676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B14, full insert sequence Length = 911 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 111 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 170 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 171 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 210
>dbj|AK100184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H12, full insert sequence Length = 1050 Score = 63.9 bits (32), Expect = 3e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 145 tgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggcaccttcgag 204 ||||||||||||||||| |||||| |||| || ||||||||||||||||||| || Sbjct: 237 tgggcggcggagatccgcgacccgaggaagggcgcccgcgtctggctcggcacctacgcc 296 Query: 205 acggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 || ||||||| || || ||||||||||||| ||| |||| Sbjct: 297 accgccgaggaggccgcccgcgcctacgacgtcgcggcgc 336
>ref|NM_103468.3| Arabidopsis thaliana RAP2.6; DNA binding / transcription factor AT1G43160 (RAP2.6) mRNA, complete cds Length = 910 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||| || |||||||||||||| || ||||| ||||||||| | || || ||||| || Sbjct: 381 tggggaaaatgggcggcggagattcgagacccacacaaggcgacacgtgtatggcttggg 440 Query: 196 accttcgagacggccgaggccgc 218 || |||||||| ||||||||||| Sbjct: 441 acattcgagacagccgaggccgc 463
>ref|NM_192160.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 220 gcgcgcgcctacgacgacgccgcgctgcgcttccgcggc 258 |||||||||||||||| |||||||| ||||||||||||| Sbjct: 346 gcgcgcgcctacgacgtcgccgcgcagcgcttccgcggc 384
>ref|XM_479169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1285 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 449 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 508 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 509 ggctcggcacgttcg 523
>ref|XM_507393.1| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.120 mRNA Length = 1417 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 551 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 610 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 611 ggctcggcacgttcg 625
>ref|XM_506472.2| PREDICTED Oryza sativa (japonica cultivar-group), B1056G08.120 mRNA Length = 1447 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 462 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 521 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 522 ggctcggcacgttcg 536
>ref|XM_477669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 899 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||||| |||||||||||||||||||| ||| ||||||||| | |||||||| Sbjct: 349 tggctcggcacgttcgagacggccgaggccgccgcgatggcctacgaccaggccgcgct 407
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||| || |||||||||||||| || ||||| ||||||||| | || || ||||| || Sbjct: 36295 tggggaaaatgggcggcggagattcgagacccacacaaggcgacacgtgtatggcttggg 36354 Query: 196 accttcgagacggccgaggccgc 218 || |||||||| ||||||||||| Sbjct: 36355 acattcgagacagccgaggccgc 36377
>gb|AY125490.1| Zea mays AP2 domain transcription factor (abi4) gene, complete cds Length = 3641 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 |||||||||||||||| || ||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2720 tggctcggcaccttcgccaccgccgaggacgccgcgcgcgcctacgaccgcgccgcgct 2778
>gb|AY114582.1| Arabidopsis thaliana RAP2.6 (At1g43160) mRNA, complete cds Length = 655 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||| || |||||||||||||| || ||||| ||||||||| | || || ||||| || Sbjct: 205 tggggaaaatgggcggcggagattcgagacccacacaaggcgacacgtgtatggcttggg 264 Query: 196 accttcgagacggccgaggccgc 218 || |||||||| ||||||||||| Sbjct: 265 acattcgagacagccgaggccgc 287
>gb|AY062847.1| Arabidopsis thaliana RAP2.6 (At1g43160) mRNA, complete cds Length = 834 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||| || |||||||||||||| || ||||| ||||||||| | || || ||||| || Sbjct: 375 tggggaaaatgggcggcggagattcgagacccacacaaggcgacacgtgtatggcttggg 434 Query: 196 accttcgagacggccgaggccgc 218 || |||||||| ||||||||||| Sbjct: 435 acattcgagacagccgaggccgc 457
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 220 gcgcgcgcctacgacgacgccgcgctgcgcttccgcggc 258 |||||||||||||||| |||||||| ||||||||||||| Sbjct: 140334 gcgcgcgcctacgacgtcgccgcgcagcgcttccgcggc 140296
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||||| |||||||||||||||||||| ||| ||||||||| | |||||||| Sbjct: 31455 tggctcggcacgttcgagacggccgaggccgccgcgatggcctacgaccaggccgcgct 31397 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Minus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggac 165 |||||||||||||| || |||||||||||||||||| Sbjct: 52653 gcggccgtggggcaggttcgcggcggagatccgggac 52617
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 81308 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 81249 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 81248 ggctcggcacgttcg 81234
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 11935 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 11876 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 11875 ggctcggcacgttcg 11861
>dbj|AK109360.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B03, full insert sequence Length = 1433 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 453 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 512 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 513 ggctcggcacgttcg 527
>dbj|AK108503.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H07, full insert sequence Length = 899 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||||||| |||||||||||||||||||| ||| ||||||||| | |||||||| Sbjct: 349 tggctcggcacgttcgagacggccgaggccgccgcgatggcctacgaccaggccgcgct 407
>dbj|AK067060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P08, full insert sequence Length = 1285 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 449 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 508 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 509 ggctcggcacgttcg 523
>dbj|AK061047.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F01, full insert sequence Length = 1417 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||| ||||| || ||||||||||||||| ||||||| | ||||| | ||||||| Sbjct: 551 agcggccatgggggaaatgggcggcggagatcagggacccccgcaagggcgtccgcgtct 610 Query: 188 ggctcggcaccttcg 202 |||||||||| |||| Sbjct: 611 ggctcggcacgttcg 625
>gb|AF003099.1|AF003099 Arabidopsis thaliana AP2 domain containing protein RAP2.6 mRNA, partial cds Length = 651 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||| || |||||||||||||| || ||||| ||||||||| | || || ||||| || Sbjct: 122 tggggaaaatgggcggcggagattcgagacccacacaaggcgacacgtgtatggcttggg 181 Query: 196 accttcgagacggccgaggccgc 218 || |||||||| ||||||||||| Sbjct: 182 acattcgagacagccgaggccgc 204
>gb|AY785904.1| Triticum monococcum cultivar DV92 TmCBF7 (CBF7) mRNA, complete cds Length = 1067 Score = 60.0 bits (30), Expect = 5e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | | |||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 371 tggggcaagtgggtgtccgagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 430 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 |||||| ||| || ||| |||||||||||| |||||| |||||||| Sbjct: 431 accttcccgaccgcggagatggcggcgcgcgcccacgacgtggccgcgct 480
>ref|XM_467125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 319 tggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 378 Query: 196 accttc 201 |||||| Sbjct: 379 accttc 384
>ref|NM_192445.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 879 Score = 60.0 bits (30), Expect = 5e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcggcgcgcgtctgg 189 ||||||||||||||| |||||||||||||| |||||| | |||| |||||||||| Sbjct: 305 ggccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgt-gcgcgtctgg 363 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||||||||||| || ||||||| || ||||||| |||||| |||| Sbjct: 364 ctcggcaccttcgacaccgccgaggaggccgcgcgcgtgtacgacaacgc 413
>gb|BT017462.1| Zea mays clone EL01N0407E07.c mRNA sequence Length = 1115 Score = 60.0 bits (30), Expect = 5e-06 Identities = 70/82 (85%), Gaps = 6/82 (7%) Strand = Plus / Plus Query: 180 gcgcgtctggctcggcaccttcgagacggccgaggc---cgcggcgcgcgcctacgacga 236 |||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 51 gcgcgtgtggctcggcaccttcg---cgggcgaggccgacgcggcgcgcgcctacgacgt 107 Query: 237 cgccgcgctgcgcttccgcggc 258 ||| |||| ||| ||||||||| Sbjct: 108 cgcggcgcagcggttccgcggc 129
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggac 165 |||||||||||||||||| |||||||||||||||||| Sbjct: 3788 agcggccgtggggcaagtacgcggcggagatccgggac 3825
>gb|AY345232.1| Oryza sativa transcription factor Rap212 mRNA, complete cds Length = 1109 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 405 tggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 464 Query: 196 accttc 201 |||||| Sbjct: 465 accttc 470
>gb|AY339377.1| Oryza sativa (japonica cultivar-group) Ap24 mRNA, complete cds Length = 1089 Score = 60.0 bits (30), Expect = 5e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcggcgcgcgtctgg 189 ||||||||||||||| |||||||||||||| |||||| | |||| |||||||||| Sbjct: 346 ggccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgt-gcgcgtctgg 404 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||||||||||| || ||||||| || ||||||| |||||| |||| Sbjct: 405 ctcggcaccttcgacaccgccgaggaggccgcgcgcgtgtacgacaacgc 454
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 60.0 bits (30), Expect = 5e-06 Identities = 92/110 (83%), Gaps = 2/110 (1%) Strand = Plus / Minus Query: 131 ggccgtggggcaagtgggcggcggagatccgggacccgca-caaggcggcgcgcgtctgg 189 ||||||||||||||| |||||||||||||| |||||| | |||| |||||||||| Sbjct: 75150 ggccgtggggcaagttcgcggcggagatccgcgacccgtggcgcggcgt-gcgcgtctgg 75092 Query: 190 ctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgc 239 |||||||||||||| || ||||||| || ||||||| |||||| |||| Sbjct: 75091 ctcggcaccttcgacaccgccgaggaggccgcgcgcgtgtacgacaacgc 75042
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 85855 tggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 85914 Query: 196 accttc 201 |||||| Sbjct: 85915 accttc 85920 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 17933 agcggccgtggggcaagttcgcggcggagatccgcgaccc 17972 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 112146 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 112205 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 112206 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 112255
>dbj|AK109606.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F03, full insert sequence Length = 1427 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||| ||||||||||||||||| || ||||||| || || |||||||||||||| ||| Sbjct: 266 cgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggcc 325 Query: 241 gc 242 || Sbjct: 326 gc 327
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||| ||||||||||||||||| || ||||||| || || |||||||||||||| ||| Sbjct: 121344 cgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggcc 121403 Query: 241 gc 242 || Sbjct: 121404 gc 121405
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 181 cgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||| ||||||||||||||||| || ||||||| || || |||||||||||||| ||| Sbjct: 13427 cgcgtgtggctcggcaccttcgacaccgccgaggaggccgcccgcgcctacgacgaggcc 13486 Query: 241 gc 242 || Sbjct: 13487 gc 13488
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 60.0 bits (30), Expect = 5e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||||| || |||| |||| | ||||| ||||||||||| Sbjct: 249067 tggggcaagtgggtgtcggagatccgcgagccgcgcaagaagtcgcgcatctggctcggc 249126 Query: 196 accttc 201 |||||| Sbjct: 249127 accttc 249132 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 160205 agcggccgtggggcaagttcgcggcggagatcagggacccg 160165 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 181246 agcggccgtggggcaagttcgcggcggagatccgcgaccc 181285 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Minus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 305797 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 305738 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 305737 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 305688
>gb|AY831394.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 3 (BIERF3) mRNA, complete cds Length = 1199 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 522 agcggccgtggggcaagttcgcggcggagatcagggacccg 562
>ref|XM_467107.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 521 agcggccgtggggcaagttcgcggcggagatcagggacccg 561
>ref|XM_506890.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.13 mRNA Length = 1302 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 522 agcggccgtggggcaagttcgcggcggagatcagggacccg 562
>gb|BT017055.1| Zea mays clone EL01N0356C10.c mRNA sequence Length = 845 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacga 233 ||||||||||| ||| || ||| ||||||||||||||||||||||||| Sbjct: 188 tctggctcggctcctacgccacgcccgaggccgcggcgcgcgcctacga 236
>ref|XM_470241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 59 agcggccgtggggcaagttcgcggcggagatccgcgacccg 99
>gb|AY339376.1| Oryza sativa (japonica cultivar-group) Ap23 mRNA, complete cds Length = 660 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 107 agcggccgtggggcaagttcgcggcggagatccgcgacccg 147
>gb|DQ353852.1| Triticum aestivum AP2 domain transcription factor TaDREB2 mRNA, complete cds Length = 1043 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 129 gcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctg 188 |||| ||||||||||||||| | |||||||| |||| |||| |||| | | ||| |||| Sbjct: 306 gcgggcgtggggcaagtgggtgtcggagatcagggagccgcgcaagaagtcccgcatctg 365 Query: 189 gctcggcaccttc 201 ||||||||||||| Sbjct: 366 gctcggcaccttc 378
>gb|AY951947.1| Triticum monococcum CRT/DRE binding factor 5 (CBF5) gene, complete cds Length = 2148 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| | |||||||||| ||||||||| |||||| |||||||| Sbjct: 1128 tctggctcggcaccttcgccagccccgaggccgccgcgcgcgcccacgacgtcgccgcgc 1187 Query: 245 t 245 | Sbjct: 1188 t 1188
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 54028 agcggccgtggggcaagttcgcggcggagatccgcgacccg 54068
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||||| |||||| Sbjct: 126992 agcggccgtggggcaagttcgcggcggagatccgcgacccg 127032
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 41374 agcggccgtggggcaagttcgcggcggagatcagggacccg 41334 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 75468 agcggccgtggggcaagttcgcggcggagatccgcgaccc 75507
>dbj|AK105940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B11, full insert sequence Length = 1209 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 521 agcggccgtggggcaagttcgcggcggagatcagggacccg 561
>dbj|AK073812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068P11, full insert sequence Length = 1302 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccg 168 |||||||||||||||||| |||||||||||| |||||||| Sbjct: 522 agcggccgtggggcaagttcgcggcggagatcagggacccg 562
>gb|AY785894.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1B.1 (DREB1B) mRNA, complete cds Length = 925 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| |||| || |||||||| ||||||||||| |||||| |||||||||| Sbjct: 205 tggctcggcacgttcgccaccgccgaggcggcggcgcgcgcgcacgacgccgccgcgctg 264
>ref|XM_467836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1393 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 615 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 662
>ref|XM_506975.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.10 mRNA Length = 1654 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 857 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 904
>ref|XM_467109.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1035 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 479 agcggccgtggggcaagttcgcggcggagatccgcgaccc 518
>ref|XM_464403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || |||||||||||||| |||||| ||| |||||| || | Sbjct: 62 agcggccgtgggggaggtacgcggcggagatccgcgacccggcgaagaaggcgcgggtgt 121 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||| || |||| ||| | ||||||| ||| |||||||||||||||| Sbjct: 122 ggctggggacctacgactccgccgaggacgccgcgcgcgcctacgacg 169
>ref|XM_477055.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||||||| |||||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 196 tggctcggcacgttcgagaccgccgaggaggctgcgcgggcctacgacgaggccgc 251
>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF1-like protein mRNA, complete cds Length = 717 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 230 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 285
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds Length = 850 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 292 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 347
>gb|AY339378.1| Oryza sativa (japonica cultivar-group) Ap25 mRNA, complete cds Length = 1312 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggaccc 167 |||||||||||||||||| |||||||||||||| ||||| Sbjct: 610 agcggccgtggggcaagttcgcggcggagatccgcgaccc 649
>gb|AY785862.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 |||||||||| |||||||| || ||||||||||| |||||||| |||||| |||| Sbjct: 354 tctggctcggtaccttcgacaccgccgaggccgccgcgcgcgcgaacgacgccgcc 409
>gb|AY785859.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF6 (CBF6) mRNA, complete cds Length = 1036 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 |||||||||| |||||||| || ||||||||||| |||||||| |||||| |||| Sbjct: 378 tctggctcggtaccttcgacaccgccgaggccgccgcgcgcgcgaacgacgccgcc 433
>gb|AF300972.1| Oryza sativa putative DRE-binding protein 1B mRNA, complete cds Length = 897 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| |||| || |||||||| ||||||||||| |||||| |||||||||| Sbjct: 205 tggctcggcacgttcgccaccgccgaggcggcggcgcgcgcgcacgacgccgccgcgctg 264
>gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complete cds Length = 895 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 296 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 351
>gb|AY166833.1| Oryza sativa (indica cultivar-group) putative DRE-binding protein 1B mRNA, complete cds Length = 862 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| |||| || |||||||| ||||||||||| |||||| |||||||||| Sbjct: 195 tggctcggcacgttcgccaccgccgaggcggcggcgcgcgcgcacgacgccgccgcgctg 254
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || |||||||||||||| |||||| ||| |||||| || | Sbjct: 30588 agcggccgtgggggaggtacgcggcggagatccgcgacccggcgaagaaggcgcgggtgt 30529 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||| || |||| ||| | ||||||| ||| |||||||||||||||| Sbjct: 30528 ggctggggacctacgactccgccgaggacgccgcgcgcgcctacgacg 30481
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacga 236 ||||||| ||||| ||||||||||| |||| |||||| ||||| |||||||| Sbjct: 95579 tctggctgggcacgttcgagacggcggaggacgcggcacgcgcgtacgacga 95630
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 128 agcggccgtggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtct 187 ||||||||||||| | || |||||||||||||| |||||| ||| |||||| || | Sbjct: 104201 agcggccgtgggggaggtacgcggcggagatccgcgacccggcgaagaaggcgcgggtgt 104142 Query: 188 ggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 |||| || |||| ||| | ||||||| ||| |||||||||||||||| Sbjct: 104141 ggctggggacctacgactccgccgaggacgccgcgcgcgcctacgacg 104094
>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa273B05 Length = 41326 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 38457 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 38402 Score = 56.0 bits (28), Expect = 8e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgctg 246 ||||||||||| |||| || |||||||| ||||||||||| |||||| |||||||||| Sbjct: 30404 tggctcggcacgttcgccaccgccgaggcggcggcgcgcgcgcacgacgccgccgcgctg 30345 Score = 46.1 bits (23), Expect = 0.078 Identities = 53/63 (84%) Strand = Plus / Minus Query: 178 gcgcgcgtctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgac 237 |||||| | ||||||||||| | || || |||||||||||||||||||| |||||| | Sbjct: 34421 gcgcgcctgtggctcggcacgtacgtcaccgccgaggccgcggcgcgcgcgcacgacgcc 34362 Query: 238 gcc 240 ||| Sbjct: 34361 gcc 34359
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 47890 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 47937
>dbj|AK108355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C04, full insert sequence Length = 873 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacga 236 ||||||| ||||| ||||||||||| |||| |||||| ||||| |||||||| Sbjct: 219 tctggctgggcacgttcgagacggcggaggacgcggcacgcgcgtacgacga 270
>dbj|AK105991.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H01, full insert sequence Length = 1393 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 615 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 662
>dbj|AK105877.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C05, full insert sequence Length = 1654 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || ||||||| ||| |||| |||||||||| Sbjct: 857 tggctcggcaccttcgacaccgccgaggacgccgcgctcgcctacgac 904
>dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A04, full insert sequence Length = 955 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 344 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 399
>dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L23, full insert sequence Length = 909 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgcc 240 ||||||||||||| ||||| || ||||||| |||||||||||| |||||| |||| Sbjct: 310 tctggctcggcacgttcgacaccgccgagggcgcggcgcgcgcgcacgacgccgcc 365
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||||||| |||||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 87949 tggctcggcacgttcgagaccgccgaggaggctgcgcgggcctacgacgaggccgc 88004
>gb|AY104042.1| Zea mays PCO094376 mRNA sequence Length = 918 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 187 tggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||| || || |||| |||||||| |||||||||| Sbjct: 76 tggctcggcaccttcgacaccgcggaggacgcggcgctcgcctacgac 123
>gb|DQ026517.1| Triticum aestivum dehydration responsive element binding protein (DBP) mRNA, complete cds Length = 1343 Score = 56.0 bits (28), Expect = 8e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccgggacccgcacaag 174 |||||||||||||| |||||||||||| || ||||||||| Sbjct: 369 gtggggcaagtgggtggcggagatccgcgagccgcacaag 408
>ref|XM_507229.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453D01.40 mRNA Length = 1657 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 879 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 937 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 830 tggggcaagtgggtggcggagatccgg 856
>ref|XM_482344.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1652 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 881 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 939 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 832 tggggcaagtgggtggcggagatccgg 858
>gb|AY785896.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1E (DREB1E) gene, complete cds Length = 660 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 230 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 272
>ref|NM_184246.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1773 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 865 gtggggcaagtgggcggcggagatccg 891
>ref|XM_473568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 660 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 230 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 272
>gb|BT016869.1| Zea mays clone Contig702 mRNA sequence Length = 1808 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 996 gtggggcaagtgggcggcggagatccg 970
>gb|AY341828.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP210 mRNA, complete cds Length = 1279 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 400 gtggggcaagtgggcggcggagatccg 426
>gb|AY785866.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF7 (CBF7) gene, complete cds Length = 898 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||| ||||| || | |||| | ||||| ||||||||||| Sbjct: 227 tggggcaagtgggtgtcggagattcgggagccccgcaagaagtcgcgcatctggctcggc 286 Query: 196 accttcg 202 ||||||| Sbjct: 287 accttcg 293
>gb|AY785865.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF7 (CBF7) gene, complete cds Length = 898 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||| ||||| || | |||| | ||||| ||||||||||| Sbjct: 227 tggggcaagtgggtgtcggagattcgggagccccgcaagaagtcgcgcatctggctcggc 286 Query: 196 accttcg 202 ||||||| Sbjct: 287 accttcg 293
>gb|AY785863.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF7 (CBF7) mRNA, complete cds Length = 969 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||| ||||| || | |||| | ||||| ||||||||||| Sbjct: 248 tggggcaagtgggtgtcggagattcgggagccccgcaagaagtcgcgcatctggctcggc 307 Query: 196 accttcg 202 ||||||| Sbjct: 308 accttcg 314
>gb|AY785864.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF7 (CBF7) gene, complete cds Length = 898 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||| ||||| || | |||| | ||||| ||||||||||| Sbjct: 227 tggggcaagtgggtgtcggagattcgggagccccgcaagaagtcgcgcatctggctcggc 286 Query: 196 accttcg 202 ||||||| Sbjct: 287 accttcg 293
>gb|AF370730.1|AF370730 Secale cereale clone 81 CBF-like protein mRNA, complete cds Length = 1145 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacg 235 ||||||||||||||||| | ||||||||| |||||||||||| |||||| Sbjct: 298 tctggctcggcaccttcaacacggccgagatggcggcgcgcgcccacgacg 348
>gb|AY258283.1| Oryza sativa (japonica cultivar-group) CR350 transcription factor gene, complete cds Length = 737 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 254 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 296
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 88799 gtggggcaagtgggcggcggagatccg 88825
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||| ||||| | || |||||||| || ||||||||||||| ||||||| Sbjct: 93077 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgcg 93019
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||| ||||| | || |||||||| || ||||||||||||| ||||||| Sbjct: 37110 tctggctcggcacgttcgactccgcagaggccgccgcccgcgcctacgacgccgccgcg 37052
>dbj|AK119645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G05, full insert sequence Length = 1850 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 863 gtggggcaagtgggcggcggagatccg 889
>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0042B03 Length = 167669 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 16526 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 16584 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 16477 tggggcaagtgggtggcggagatccgg 16503
>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0453D01 Length = 147461 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 135723 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 135781 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 135674 tggggcaagtgggtggcggagatccgg 135700
>dbj|AK105725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G08, full insert sequence Length = 1652 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 881 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 939 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 832 tggggcaagtgggtggcggagatccgg 858
>dbj|AK102277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089D21, full insert sequence Length = 1772 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 864 gtggggcaagtgggcggcggagatccg 890
>dbj|AK101133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026F23, full insert sequence Length = 1874 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 859 gtggggcaagtgggcggcggagatccg 885
>dbj|AK068312.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K12, full insert sequence Length = 1657 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcg 243 ||||||||||||||||||| || ||||||| ||||||| | |||||||| | |||||| Sbjct: 878 tctggctcggcaccttcgacaccgccgaggaggcggcgctcacctacgaccaggccgcg 936 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgg 162 ||||||||||||| ||||||||||||| Sbjct: 829 tggggcaagtgggtggcggagatccgg 855
>gb|BT023988.1| Zea mays clone EL01N0413B03 mRNA sequence Length = 1494 Score = 54.0 bits (27), Expect = 3e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| ||||||||||||| ||||| ||| | || ||||||||||| Sbjct: 362 tggggcaagtgggtggcggagatccggctcccgcgcaaccgcacccggctctggctcggc 421 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgac 234 |||||||| || ||||||| ||||||| ||||||||| Sbjct: 422 accttcgacaccgccgaggaggcggcgctggcctacgac 460
>dbj|AK062063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D02, full insert sequence Length = 1375 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 135 gtggggcaagtgggcggcggagatccg 161 ||||||||||||||||||||||||||| Sbjct: 287 gtggggcaagtgggcggcggagatccg 313
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 6418 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 6460
>gb|AY114110.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF-1-like protein mRNA, complete cds Length = 660 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgc 227 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 230 tctggctcggcaccttcgagaccgccgagatggcggcgcgcgc 272
>gb|AY785902.1| Triticum aestivum cultivar Chinese Spring TaCBF5 (CBF5) mRNA, complete cds Length = 1121 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgc 244 |||||||||||||||||| | |||||||||| || |||||| |||||| |||||||| Sbjct: 312 tctggctcggcaccttcgccagccccgaggccgccgcccgcgcccacgacgtcgccgcgc 371 Query: 245 tg 246 || Sbjct: 372 tg 373
>ref|XM_467128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 308 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 367 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 368 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 417
>ref|XM_450677.1| Oryza sativa (japonica cultivar-group), mRNA Length = 876 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||||| ||||||||| Sbjct: 404 tctggctcggcaccttcgacacagccgaggaggcggcgcttgcctacgac 453
>ref|XM_473412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||||||||| || | ||| | ||||| ||||||||||| Sbjct: 214 tggggcaagtgggtgtcggagatccgggagccccggaagaagtcgcgcatctggctcggc 273 Query: 196 accttcgagacggccgag 213 || ||||| || |||||| Sbjct: 274 acgttcgacaccgccgag 291
>gb|AY346094.1| Oryza sativa AP2 domain-containing protein Rap211 mRNA, complete cds Length = 973 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 321 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 380 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 381 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 430
>gb|AY305028.1| Oryza sativa (japonica cultivar-group) DRE binding factor 2 (DBF2) mRNA, complete cds Length = 1403 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||||| ||||||||| Sbjct: 704 tctggctcggcaccttcgacaccgccgaggaggcggcgcttgcctacgac 753
>gb|BT009310.1| Triticum aestivum clone wlm1.pk0022.d1:fis, full insert mRNA sequence Length = 1470 Score = 52.0 bits (26), Expect = 0.001 Identities = 69/82 (84%), Gaps = 6/82 (7%) Strand = Plus / Plus Query: 180 gcgcgtctggctcggcaccttcgagacggccgaggccgcggc---gcgcgcctacgacga 236 |||||||||||||||||||||| |||| ||||||| ||| |||||||||||||| Sbjct: 346 gcgcgtctggctcggcaccttc---acgggggaggccgaggctgcgcgcgcctacgacgc 402 Query: 237 cgccgcgctgcgcttccgcggc 258 || |||| ||||||||||||| Sbjct: 403 ggcggcgcagcgcttccgcggc 424
>gb|BT009075.1| Triticum aestivum clone wip1c.pk004.o24:fis, full insert mRNA sequence Length = 1777 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||| | |||||||||| Sbjct: 892 tctggctcggcaccttcgacaccgccgaggaggcggccctcgcctacgac 941
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | ||||||||||||| || | ||| | ||||| ||||||||||| Sbjct: 20867 tggggcaagtgggtgtcggagatccgggagccccggaagaagtcgcgcatctggctcggc 20926 Query: 196 accttcgagacggccgag 213 || ||||| || |||||| Sbjct: 20927 acgttcgacaccgccgag 20944
>gb|DQ403725.1| Sorghum bicolor DRE-binding protein 2 (DREB2) mRNA, complete cds Length = 1564 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 128 agcggccgtggggcaagtgggcggcggagatccg 161 ||||| ||||||||||||||| |||||||||||| Sbjct: 766 agcggacgtggggcaagtgggtggcggagatccg 799
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||| || |||||||| | ||||||| ||||| |||||||||||||||||||| Sbjct: 147375 tctggctgggtaccttcgactccgccgaggtggcggcccgcgcctacgacgacgccgc 147432
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgc 242 ||||||| || |||||||| | ||||||| ||||| |||||||||||||||||||| Sbjct: 41830 tctggctgggtaccttcgactccgccgaggtggcggcccgcgcctacgacgacgccgc 41887
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 3926 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 3985 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 3986 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 4035
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||||| ||||||||| Sbjct: 75075 tctggctcggcaccttcgacacagccgaggaggcggcgcttgcctacgac 75124
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 185 tctggctcggcaccttcgagacggccgaggccgcggcgcgcgcctacgac 234 ||||||||||||||||||| || ||||||| ||||||| ||||||||| Sbjct: 97995 tctggctcggcaccttcgacacagccgaggaggcggcgcttgcctacgac 98044
>dbj|AK108830.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G03, full insert sequence Length = 1038 Score = 52.0 bits (26), Expect = 0.001 Identities = 89/110 (80%) Strand = Plus / Plus Query: 136 tggggcaagtgggcggcggagatccgggacccgcacaaggcggcgcgcgtctggctcggc 195 ||||||||||||| | |||||||| |||| |||| ||| | ||||| ||||||| ||| Sbjct: 308 tggggcaagtgggtgtcggagatcagggagccgcggaagaagtcgcgcatctggctgggc 367 Query: 196 accttcgagacggccgaggccgcggcgcgcgcctacgacgacgccgcgct 245 ||||||| || |||||| || |||||||| |||||| ||||||||| Sbjct: 368 accttcgccaccgccgagatggccgcgcgcgcgcacgacgtcgccgcgct 417 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,429,543 Number of Sequences: 3902068 Number of extensions: 1429543 Number of successful extensions: 66265 Number of sequences better than 10.0: 441 Number of HSP's better than 10.0 without gapping: 477 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 62425 Number of HSP's gapped (non-prelim): 3777 length of query: 363 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 341 effective length of database: 17,147,199,772 effective search space: 5847195122252 effective search space used: 5847195122252 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
