ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77c03 |
|---|---|
| Clone Library Name | barley_pub |
>STSYN_PEA (Q93XK2) Stachyose synthase precursor (EC 2.4.1.67)| (Galactinol--raffinose galactosyltransferase) Length = 853 Score = 149 bits (377), Expect = 3e-36 Identities = 75/165 (45%), Positives = 107/165 (64%), Gaps = 9/165 (5%) Frame = +3 Query: 9 YNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQALEASIARNFRDNGIIC 188 Y+ +HSYLA +G+ GVKVDV + LE + +GGRV L++ Y + L SI +NF NG+I Sbjct: 463 YDSMHSYLAESGITGVKVDVIHSLEYVCDEYGGRVDLAKVYYEGLTKSIVKNFNGNGMIA 522 Query: 189 CMSHNTDNLY-SSKRNSVVRASDDFWPRDPASHT--------IHIASVAYNTVFLGEFMQ 341 M H D + +K+ S+ R DDFW +DP +H+ +YN++++G+ +Q Sbjct: 523 SMQHCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQ 582 Query: 342 PDWDMFHSVHPMAEYHAAARAVGGCAIYVSDKPGSHDFDLLRKLV 476 PDWDMF S H A++HA +RA+ G IYVSD GSHDFDL++KLV Sbjct: 583 PDWDMFQSDHVCAKFHAGSRAICGGPIYVSDNVGSHDFDLIKKLV 627
>AGAL_SULSO (Q97U94) Alpha-galactosidase (EC 3.2.1.22) (Alpha-Gal)| Length = 648 Score = 72.4 bits (176), Expect = 6e-13 Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 1/145 (0%) Frame = +3 Query: 48 DGVKVDVQNILEALGSGHGGRVLLSRKYQQALEASIARNFRDNGIICCMSHNTDNLYSSK 227 D VKVD Q ++ A+ L SR Q AL+ S+ ++ +I CMS N +N + Sbjct: 362 DLVKVDNQWVIHAIYDSFPIG-LASRNIQIALQYSVGKD-----VINCMSMNPENYCNYF 415 Query: 228 RNSVVRASDDFWPRDPASHTIHIASVAYNTVFLGEFMQPDWDMFHSVHPMAEYHAAARAV 407 ++V+R S D+ P +HI AYN++ + PD+DMF S P A+ H AR Sbjct: 416 YSNVMRNSIDYVPFWKDGTKLHIMFNAYNSLLTSHIVYPDYDMFMSYDPYAKVHLVARVF 475 Query: 408 GGCAIYVSDK-PGSHDFDLLRKLVL 479 G IY++D+ P + +LLR VL Sbjct: 476 SGGPIYITDRHPERTNIELLRMAVL 500
>PT111_YEAST (P08468) Protein PET111, mitochondrial precursor| Length = 800 Score = 32.0 bits (71), Expect = 0.88 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = -1 Query: 331 SPRKTVLYATDAMCMVCEAGSLGQKSSEALTTEFLFELYKLSVLWLMQHIIPLSRKFRAM 152 +P+ + LY+ A+C+ L + L T F + K+ +LWL II R F + Sbjct: 549 APQFSFLYSVLALCLRNSLTGLARVVDVILRTRFRYIPLKVDILWLKWEIISNYRSFEKL 608 Query: 151 EA 146 A Sbjct: 609 SA 610
>HIS82_NITMU (Q2Y6Y6) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 392 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +3 Query: 333 FMQPDWDMFHSVHPMAEYHAAARAVGGCAIYVSDKPGSHDFDLL 464 F++P +S H A Y +AVGG I V + HD D + Sbjct: 107 FLKPGASTVYSQHAFAVYPLVTKAVGGIGISVPARNYGHDLDAM 150
>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2054 Score = 31.2 bits (69), Expect = 1.5 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +2 Query: 50 RCESRRAKHSRGARQWPWWE 109 RC + K ++G + WPWW+ Sbjct: 1219 RCVQKNIKKNKGVKDWPWWK 1238
>MUTS_BUCAP (Q8K9D2) DNA mismatch repair protein mutS| Length = 805 Score = 31.2 bits (69), Expect = 1.5 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = +3 Query: 66 VQNILEALGSGHGGRVLLSRKYQQALEASIARNFRDNGIICC-MSHNTDNLYSSKRNSVV 242 + N+L ++G LL + + +SI RD G+I C + D L S K+NS Sbjct: 393 INNVLMSIGKFEKILFLLKKSINLTVPSSI----RDGGVIACNYNKKLDELRSLKKNS-Q 447 Query: 243 RASDDFWPRDPASHTIHIASVAYNTVFLGEFMQ 341 + DF ++ + I + YN + +G ++Q Sbjct: 448 KYLQDFEVKEKSRLNIDSFKIGYNNI-VGYYIQ 479
>MY18A_MOUSE (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2035 Score = 31.2 bits (69), Expect = 1.5 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +2 Query: 50 RCESRRAKHSRGARQWPWWE 109 RC + K ++G + WPWW+ Sbjct: 1215 RCVQKNIKKNKGVKDWPWWK 1234
>ACKA2_VIBPA (Q87IJ5) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 9 YNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQALEASIA 158 +N L+ GV G+ D + ILEA+ GH G L + + + IA Sbjct: 263 FNSLNKASGFLGVSGLTSDARGILEAMEEGHEGAALAFQVFTYRVSKYIA 312
>CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +3 Query: 6 FYNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQ-----ALEASIARNFR 170 F +E+H+ + + G +VD N+++ L S RV+ S YQ+ + ++AR F+ Sbjct: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342
>CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +3 Query: 6 FYNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQ-----ALEASIARNFR 170 F +E+H+ + + G +VD N+++ L S RV+ S YQ+ + ++AR F+ Sbjct: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342
>CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subunit clpA| Length = 758 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +3 Query: 6 FYNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQ-----ALEASIARNFR 170 F +E+H+ + + G +VD N+++ L S RV+ S YQ+ + ++AR F+ Sbjct: 283 FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQ 342
>GBLP_SCHPO (Q10281) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) Length = 314 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -3 Query: 431 THVYSATADCPCRGVVF---RHWVNAMEHVPVRLHELSKENSVVRDRCDVYGMRSWVSRP 261 TH+YS A +VF R+W+ A +R+ +L + V D G+ S P Sbjct: 225 THLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEP 284 Query: 260 EII 252 E I Sbjct: 285 ECI 287
>ACKA2_VIBVY (Q7MEL2) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 9 YNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQALEASIA 158 +N L+ GV G+ D + ILEA+ GH G L + + + IA Sbjct: 263 FNSLNKASGFLGVSGLTSDARGILEAMEQGHEGATLAFQVFTYRVAKYIA 312
>ACKA2_VIBVU (Q8D7K4) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 9 YNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVLLSRKYQQALEASIA 158 +N L+ GV G+ D + ILEA+ GH G L + + + IA Sbjct: 263 FNSLNKASGFLGVSGLTSDARGILEAMEQGHEGATLAFQVFTYRVAKYIA 312
>ACKA2_VIBF1 (Q5DZD2) Acetate kinase 2 (EC 2.7.2.1) (Acetokinase 2)| Length = 397 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 9 YNELHSYLASAGVDGVKVDVQNILEALGSGHGGRVL 116 +N L+ GV G+ D + ILEA+ GH G L Sbjct: 263 FNSLNKESGFLGVSGLTSDARGILEAMEEGHEGATL 298
>HELI_EBV (P03214) Probable ATP-dependent helicase BBLF4 (EC 3.6.1.-)| Length = 809 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Frame = +3 Query: 123 RKYQQALEASIARNFR-----DNGIICCMSHNTDNLYSS 224 R QQ +A +R R + G +CC+ HNT+ LY + Sbjct: 673 RGKQQPQDAGSSRMPRLMVKDEAGFVCCLEHNTNKLYET 711 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,796,191 Number of Sequences: 219361 Number of extensions: 1611082 Number of successful extensions: 4971 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4968 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
