| Clone Name | bast77c03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483143.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2616 Score = 333 bits (168), Expect = 3e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 1210 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 1269 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1270 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 1329 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1330 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 1389 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | ||||| ||||||||||| ||||| |||||||| |||||||| || || | | |||| Sbjct: 1390 tcatatgctgcatgagccacaacacggataacttgtacagttctaagaggagtgctgttg 1449 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1450 tgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatattgcat 1509 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 |||| || || || ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct: 1510 ctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatgttcc 1569 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| |||||||||||||| |||||||| || || ||| | |||||||| || || || | Sbjct: 1570 atagtgttcacccaatggctgaataccatgctgcagcaagagcagtcggtggctgtgcca 1629 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagct 472 |||| || |||||||| || || | |||||||||| || |||||| |||||| Sbjct: 1630 tatatgtcagtgacaagcctgggaaccatgacttcaatttgctgaagaagct 1681
>ref|XM_483144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2500 Score = 333 bits (168), Expect = 3e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 1217 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 1276 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1277 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 1336 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1337 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 1396 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | ||||| ||||||||||| ||||| |||||||| |||||||| || || | | |||| Sbjct: 1397 tcatatgctgcatgagccacaacacggataacttgtacagttctaagaggagtgctgttg 1456 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1457 tgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatattgcat 1516 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 |||| || || || ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct: 1517 ctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatgttcc 1576 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| |||||||||||||| |||||||| || || ||| | |||||||| || || || | Sbjct: 1577 atagtgttcacccaatggctgaataccatgctgcagcaagagcagtcggtggctgtgcca 1636 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagct 472 |||| || |||||||| || || | |||||||||| || |||||| |||||| Sbjct: 1637 tatatgtcagtgacaagcctgggaaccatgacttcaatttgctgaagaagct 1688
>dbj|AK067229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096C15, full insert sequence Length = 2616 Score = 333 bits (168), Expect = 3e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 1210 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 1269 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1270 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 1329 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1330 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 1389 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | ||||| ||||||||||| ||||| |||||||| |||||||| || || | | |||| Sbjct: 1390 tcatatgctgcatgagccacaacacggataacttgtacagttctaagaggagtgctgttg 1449 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1450 tgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatattgcat 1509 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 |||| || || || ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct: 1510 ctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatgttcc 1569 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| |||||||||||||| |||||||| || || ||| | |||||||| || || || | Sbjct: 1570 atagtgttcacccaatggctgaataccatgctgcagcaagagcagtcggtggctgtgcca 1629 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagct 472 |||| || |||||||| || || | |||||||||| || |||||| |||||| Sbjct: 1630 tatatgtcagtgacaagcctgggaaccatgacttcaatttgctgaagaagct 1681
>dbj|AK067381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102C10, full insert sequence Length = 2499 Score = 333 bits (168), Expect = 3e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 1216 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 1275 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1276 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 1335 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1336 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 1395 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | ||||| ||||||||||| ||||| |||||||| |||||||| || || | | |||| Sbjct: 1396 tcatatgctgcatgagccacaacacggataacttgtacagttctaagaggagtgctgttg 1455 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1456 tgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatattgcat 1515 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 |||| || || || ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct: 1516 ctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatgttcc 1575 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| |||||||||||||| |||||||| || || ||| | |||||||| || || || | Sbjct: 1576 atagtgttcacccaatggctgaataccatgctgcagcaagagcagtcggtggctgtgcca 1635 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagct 472 |||| || |||||||| || || | |||||||||| || |||||| |||||| Sbjct: 1636 tatatgtcagtgacaagcctgggaaccatgacttcaatttgctgaagaagct 1687
>gb|AF251068.2| Oryza sativa (japonica cultivar-group) alkaline alpha-galactosidase mRNA, complete cds Length = 2694 Score = 333 bits (168), Expect = 3e-88 Identities = 396/472 (83%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 1291 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 1350 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1351 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 1410 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1411 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 1470 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | ||||| ||||||||||| ||||| |||||||| |||||||| || || | | |||| Sbjct: 1471 tcatatgctgcatgagccacaacacggataacttgtacagttctaagaggagtgctgttg 1530 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1531 tgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatattgcat 1590 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 |||| || || || ||||| || |||||||| |||||||| || || ||||||||||||| Sbjct: 1591 ctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatgttcc 1650 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| |||||||||||||| |||||||| || || ||| | |||||||| || || || | Sbjct: 1651 atagtgttcacccaatggctgaataccatgctgcagcaagagcagtcggtggctgtgcca 1710 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagct 472 |||| || |||||||| || || | |||||||||| || |||||| |||||| Sbjct: 1711 tatatgtcagtgacaagcctgggaaccatgacttcaatttgctgaagaagct 1762
>gb|AF497512.1| Zea mays alkaline alpha galactosidase 3 mRNA, complete cds Length = 2483 Score = 236 bits (119), Expect = 5e-59 Identities = 389/479 (81%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 |||| |||||| | ||||||||||| ||||||||||||||||| | ||||| ||||| | Sbjct: 1191 tcagtttctacgacgagctccactcgtacctcgcgtctgccgggatcgacggggtgaagg 1250 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 | |||||||| ||| | |||||| |||| ||| |||||||| ||||| ||| | ||| Sbjct: 1251 tggacgtgcagaacgtcctcgagacgctgggcgccggccatggcgggagggtgatgctgg 1310 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||||||||||||||| ||||| ||| |||| |||| |||| ||||| || | Sbjct: 1311 cgaggaagtaccagcaggctctggaagcgtccgtcgccaggaacttccctgacaatggca 1370 Query: 181 taatatgttgcatgagccataacactgataacttatacagttcaaaaagaaactcggttg 240 | |||| ||||||||||| | ||| || ||||| ||||| || ||| | | | |||| Sbjct: 1371 tcatatcgtgcatgagccacagcacggacaacttgtacagctcgaaacggagcgcggtga 1430 Query: 241 tgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcat 300 | ||||||||||| ||||||||||| |||||||| ||||| |||||||||||| |||| | Sbjct: 1431 ttagagcctctgacgatttctggccgagagaccccgcttcccataccatacacgtcgcgt 1490 Query: 301 ctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcc 360 | ||||| || ||||| || || ||||| |||||||||||||| |||||||||||||||| Sbjct: 1491 ccgtcgcttataacaccgtctttcttggggagttcatgcagccagactgggacatgttcc 1550 Query: 361 atagcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgcta 420 |||| ||||| || ||||| || ||||| || ||||| || || || || || || || | Sbjct: 1551 atagtgttcatcccatggctgagtaccatgctgcggctcgagcggttggtggctgtgcca 1610 Query: 421 tatacgtgagtgacaaaccaggaagccatgacttcgatctgctgaggaagcttgtgctt 479 |||| || || ||||| || || |||||||||||| ||||||| | |||||| |||||| Sbjct: 1611 tatatgtcagcgacaagcctgggagccatgacttcaatctgctcaagaagctcgtgctt 1669
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 174 bits (88), Expect = 2e-40 Identities = 187/220 (85%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 24470344 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 24470403 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 24470404 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 24470463 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 24470464 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 24470523 Query: 181 taatatgttgcatgagccataacactgataacttatacag 220 | ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 24470524 tcatatgctgcatgagccacaacacggataacttgtacag 24470563 Score = 123 bits (62), Expect = 6e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 24470680 gttgtgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatatt 24470739 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| |||||||| || || ||||||||| Sbjct: 24470740 gcatctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatg 24470799 Query: 357 ttccat 362 |||||| Sbjct: 24470800 ttccat 24470805 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 15930617 ttgtgagagcttctgatgatttctggcccagagaacctgcctcacatactatacatattg 15930676 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 ||||||| || || || ||||| || |||| ||| ||||||||||| ||||||||||||| Sbjct: 15930677 catctgttgcatataatactgtatttcttgtagaattcatgcagccagactgggacatgt 15930736 Query: 358 tccat 362 ||||| Sbjct: 15930737 tccat 15930741 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 366 gttcacccaatggcggaataccacgccgcggcacgggcagtcgg 409 |||||||||||||| |||||||| || || ||| | |||||||| Sbjct: 24470896 gttcacccaatggctgaataccatgctgcagcaagagcagtcgg 24470939
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 174 bits (88), Expect = 2e-40 Identities = 187/220 (85%) Strand = Plus / Plus Query: 1 tcagcttctacaatgagctccactcctacctcgcgtctgccggagtggacggtgtgaaag 60 ||||||||||||| ||||| ||| ||||||| || ||||| || | || || ||||||| Sbjct: 86060 tcagcttctacaacgagctacacgcctaccttgcatctgctgggatcgatggagtgaaag 86119 Query: 61 tagacgtgcaaaacattctcgaggcgctaggcagtggccatggtgggagagtgcttctgt 120 |||| ||||| |||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 86120 tagatgtgcagaacattcttgagacactgggtgctggccatggtggaagagtgcttctgg 86179 Query: 121 ctaggaagtaccagcaggctctagaagcttccatcgcacggaatttccgcgacaacggta 180 | |||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 86180 caaggaagtatcaccaggctctagaagcttccatcgcccggaacttccgcgacaacggca 86239 Query: 181 taatatgttgcatgagccataacactgataacttatacag 220 | ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 86240 tcatatgctgcatgagccacaacacggataacttgtacag 86279 Score = 123 bits (62), Expect = 6e-25 Identities = 110/126 (87%) Strand = Plus / Plus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 86396 gttgtgagagcttctgatgatttctggcctagagaccctgcttcccatactatacatatt 86455 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| |||||||| || || ||||||||| Sbjct: 86456 gcatctgttgcatataatactgtatttcttggagaattcatgcaaccagattgggacatg 86515 Query: 357 ttccat 362 |||||| Sbjct: 86516 ttccat 86521 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 366 gttcacccaatggcggaataccacgccgcggcacgggcagtcgg 409 |||||||||||||| |||||||| || || ||| | |||||||| Sbjct: 86612 gttcacccaatggctgaataccatgctgcagcaagagcagtcgg 86655
>emb|X79330.1|BOPUTIN B.oleracea putative imbibition protein mRNA Length = 2669 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| |||||||||| || || ||||| || |||||||| || ||||| || | Sbjct: 1496 ttgttagagcgtctgatgattactatccgagagatcctgcttcgcacactatacatatag 1555 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||| ||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 1556 catcggttgcttacaatactcttttccttggagagttcatgcaacctgactgggacatgt 1615 Query: 358 tccatag 364 ||||||| Sbjct: 1616 tccatag 1622
>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475C12 Length = 140863 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 2656 ttgtgagagcttctgatgatttctggcccagagaacctgcctcacatactatacatattg 2715 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 ||||||| || || || ||||| || |||| ||| ||||||||||| ||||||||||||| Sbjct: 2716 catctgttgcatataatactgtatttcttgtagaattcatgcagccagactgggacatgt 2775 Query: 358 tccat 362 ||||| Sbjct: 2776 tccat 2780
>dbj|AP005512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012O03 Length = 141860 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||||||||| ||||||||||||||||| ||||| || || || ||||| ||||| || | Sbjct: 110660 ttgtgagagcttctgatgatttctggcccagagaacctgcctcacatactatacatattg 110719 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 ||||||| || || || ||||| || |||| ||| ||||||||||| ||||||||||||| Sbjct: 110720 catctgttgcatataatactgtatttcttgtagaattcatgcagccagactgggacatgt 110779 Query: 358 tccat 362 ||||| Sbjct: 110780 tccat 110784
>ref|NM_104450.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT1G55740 mRNA, complete cds Length = 2474 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 255 gatttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaac 314 |||||||||||||||||||| ||||| || || || ||||| || ||||| || || ||| Sbjct: 1426 gatttctggcctagagaccccgcttcacacacgatccacattgcttctgttgcatataac 1485 Query: 315 actgttttccttggagagttcatgcagcctgactgggacatgttccatag 364 || |||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 1486 acacttttccttggagagtttatgcagccggactgggacatgtttcatag 1535 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggtgtgaaagtagacgtgcaaaacattct 79 ||||| ||||||||||| ||||||||||| Sbjct: 1222 ggtgtcaaagtagacgtccaaaacattct 1250
>gb|BT004640.1| Arabidopsis thaliana At1g55740 gene, complete cds Length = 2265 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 255 gatttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaac 314 |||||||||||||||||||| ||||| || || || ||||| || ||||| || || ||| Sbjct: 1357 gatttctggcctagagaccccgcttcacacacgatccacattgcttctgttgcatataac 1416 Query: 315 actgttttccttggagagttcatgcagcctgactgggacatgttccatag 364 || |||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 1417 acacttttccttggagagtttatgcagccggactgggacatgtttcatag 1466 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 ggtgtgaaagtagacgtgcaaaacattct 79 ||||| ||||||||||| ||||||||||| Sbjct: 1153 ggtgtcaaagtagacgtccaaaacattct 1181
>ref|XM_477103.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 95.6 bits (48), Expect = 1e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 285 accatacacatcgcatctgtcgcgtacaacactgttttccttggagagttcatgcagcct 344 ||||| ||| |||| || ||||| |||||||| || ||||| || |||||||||||||| Sbjct: 1399 accatccacgtcgcctccgtcgcctacaacaccgtcttcctcggcgagttcatgcagccc 1458 Query: 345 gactgggacatgttccatagcgttcacccaatggcggaataccacgccgcggcacgggca 404 ||||||||||||||||||||| | ||||| |||||| ||||||| |||||| |||| Sbjct: 1459 gactgggacatgttccatagcttgcacccggcggcggagtaccacggcgcggcgagggcg 1518 Query: 405 gtcggcggttgcgctatatacgtgagtgacaaaccaggaagccatgacttcgatctgctg 464 ||||||| || | || ||||| || ||||| || || | ||| ||||||||||||| Sbjct: 1519 atcggcgggtgtccgatctacgtcagcgacaagccggggaaccacaacttcgatctgctc 1578 Query: 465 aggaagct 472 |||||||| Sbjct: 1579 aggaagct 1586
>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I, complete sequence Length = 109171 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 255 gatttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaac 314 |||||||||||||||||||| ||||| || || || ||||| || ||||| || || ||| Sbjct: 74871 gatttctggcctagagaccccgcttcacacacgatccacattgcttctgttgcatataac 74812 Query: 315 actgttttccttggagagttcatgcagcctgactgggacatgtt 358 || |||||||||||||||| |||||||| |||||||||||||| Sbjct: 74811 acacttttccttggagagtttatgcagccggactgggacatgtt 74768 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 ggtgtgaaagtagacgtgcaaaacattct 79 ||||| ||||||||||| ||||||||||| Sbjct: 75166 ggtgtcaaagtagacgtccaaaacattct 75138
>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full insert sequence Length = 2827 Score = 95.6 bits (48), Expect = 1e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 285 accatacacatcgcatctgtcgcgtacaacactgttttccttggagagttcatgcagcct 344 ||||| ||| |||| || ||||| |||||||| || ||||| || |||||||||||||| Sbjct: 1629 accatccacgtcgcctccgtcgcctacaacaccgtcttcctcggcgagttcatgcagccc 1688 Query: 345 gactgggacatgttccatagcgttcacccaatggcggaataccacgccgcggcacgggca 404 ||||||||||||||||||||| | ||||| |||||| ||||||| |||||| |||| Sbjct: 1689 gactgggacatgttccatagcttgcacccggcggcggagtaccacggcgcggcgagggcg 1748 Query: 405 gtcggcggttgcgctatatacgtgagtgacaaaccaggaagccatgacttcgatctgctg 464 ||||||| || | || ||||| || ||||| || || | ||| ||||||||||||| Sbjct: 1749 atcggcgggtgtccgatctacgtcagcgacaagccggggaaccacaacttcgatctgctc 1808 Query: 465 aggaagct 472 |||||||| Sbjct: 1809 aggaagct 1816
>ref|NM_202722.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT3G57520 transcript variant AT3G57520.3 mRNA, complete cds Length = 2699 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1550 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 1609 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 1610 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 1669 Query: 358 tccatag 364 ||||||| Sbjct: 1670 tccatag 1676
>ref|NM_180384.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT3G57520 transcript variant AT3G57520.2 mRNA, complete cds Length = 2727 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1550 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 1609 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 1610 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 1669 Query: 358 tccatag 364 ||||||| Sbjct: 1670 tccatag 1676
>ref|NM_115612.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT3G57520 transcript variant AT3G57520.1 mRNA, complete cds Length = 2761 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1550 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 1609 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 1610 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 1669 Query: 358 tccatag 364 ||||||| Sbjct: 1670 tccatag 1676
>gb|AY050772.1| Arabidopsis thaliana putative imbibition protein homolog (At3g57520) mRNA, complete cds Length = 2738 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1550 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 1609 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 1610 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 1669 Query: 358 tccatag 364 ||||||| Sbjct: 1670 tccatag 1676
>emb|BX823957.1|CNS0A7V2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2680 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 1540 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 1599 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 1600 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 1659 Query: 358 tccatag 364 ||||||| Sbjct: 1660 tccatag 1666
>emb|BX822839.1|CNS0A4V0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1286 Score = 93.7 bits (47), Expect = 5e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 160 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 219 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 220 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 279 Query: 358 tccatag 364 ||||||| Sbjct: 280 tccatag 286
>gb|AF512549.1| Lycopersicon esculentum alkaline alpha-galactosidase seed imbibition protein (SIP) mRNA, complete cds Length = 2655 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 243 agagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcgcatct 302 ||||| || |||||||||||||| ||||||| || || || || || ||||| ||||| Sbjct: 1499 agagcatcggatgatttctggccacgagaccctgcatcacacacaattcacatagcatca 1558 Query: 303 gtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttccat 362 || ||||||||||| |||||||||| || |||||||||||||| ||||| ||||| || Sbjct: 1559 gtggcgtacaacaccattttccttggtgaattcatgcagcctgattgggatatgtttcac 1618 Query: 363 agcgttcacccaatggcggaataccacgccgcggcacgggcagtcggcggttgcgctata 422 || || || || ||||| |||||||||| || ||||| || || || || || ||||| Sbjct: 1619 agtgtgcatcccatggctgaataccacggagctgcacgagctgttggaggctgtgctatt 1678 Query: 423 tacgtgagtgacaa 436 ||||| |||||||| Sbjct: 1679 tacgttagtgacaa 1692
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 Score = 89.7 bits (45), Expect = 8e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 238 ttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatcg 297 |||| ||||| || |||||||||| || ||||| || ||||| || ||||| ||||| | Sbjct: 44280 ttgttagagcttccgatgatttctacccaagagatcctgcttctcacaccatccacattg 44221 Query: 298 catctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgt 357 |||| || || ||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct: 44220 catcggttgcatacaacagccttttccttggagagttcatgcaacctgactgggatatgt 44161 Query: 358 tccat 362 ||||| Sbjct: 44160 tccat 44156
>gb|AF497510.2| Zea mays alkaline alpha galactosidase 1 mRNA, complete cds Length = 2790 Score = 89.7 bits (45), Expect = 8e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||| | ||| |||| || |||||||||||||| || ||||| || Sbjct: 1669 gacccggcatcgcacaccgtccacgtcgcctccgtcgcgtacaacaccgtcttcctcggc 1728 Query: 330 gagttcatgcagcctgactgggacatgttccatagcgttcacccaatggcggaataccac 389 |||||||||||||| || |||||||||||||||||| | || || |||||| |||||| Sbjct: 1729 gagttcatgcagcccgattgggacatgttccatagcttgcatccggcggcggagtaccac 1788 Query: 390 gccgcggcacgggcagtcggcggttgcgctatatacgtgagtgacaaaccaggaagccat 449 | |||||| |||| |||| || ||| | |||||||| || ||||| || || | ||| Sbjct: 1789 ggcgcggcgagggccatcggtggctgcccgatatacgtcagcgacaagccggggaaccac 1848 Query: 450 gacttcgatctgctgaggaagcttgtgct 478 ||||||| ||||| |||||||| ||||| Sbjct: 1849 aacttcgagctgctcaggaagctcgtgct 1877
>gb|AC145320.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041K10 map near E50283S, complete sequence Length = 140651 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| ||| |||||||||| || ||||| | || || ||||| ||||| || Sbjct: 48254 gttgtgagagcttctaatgatttctgacccagagaacatgcctcacatactatacatatt 48195 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| || |||||||| |||||||||||| Sbjct: 48194 gcatctgttgcatataatactgtatttcttggagaatttatgcagccagactgggacatg 48135 Query: 357 ttccat 362 |||||| Sbjct: 48134 ttccat 48129
>gb|DQ395330.2| Cucumis sativus alkaline alpha galactosidase (AGA2) mRNA, complete cds Length = 2844 Score = 83.8 bits (42), Expect = 5e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 319 ttttccttggagagttcatgcagcctgactgggacatgttccatag 364 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1658 ttttccttggagagttcatgcagcctgactgggatatgttccatag 1703
>gb|AY114165.1| Cucumis melo alkaline alpha galactosidase II (aga2) mRNA, complete cds Length = 2319 Score = 83.8 bits (42), Expect = 5e-13 Identities = 45/46 (97%) Strand = Plus / Plus Query: 319 ttttccttggagagttcatgcagcctgactgggacatgttccatag 364 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1409 ttttccttggagagttcatgcagcctgactgggatatgttccatag 1454
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| ||| |||||||||| || ||||| | || || ||||| ||||| || Sbjct: 13557018 gttgtgagagcttctaatgatttctgacccagagaacatgcctcacatactatacatatt 13556959 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| || |||||||| |||||||||||| Sbjct: 13556958 gcatctgttgcatataatactgtatttcttggagaatttatgcagccagactgggacatg 13556899 Query: 357 ttccat 362 |||||| Sbjct: 13556898 ttccat 13556893
>dbj|AK069963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037J05, full insert sequence Length = 2512 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| ||| |||||||||| || ||||| | || || ||||| ||||| || Sbjct: 947 gttgtgagagcttctaatgatttctgacccagagaacatgcctcacatactatacatatt 1006 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| || |||||||| |||||||||||| Sbjct: 1007 gcatctgttgcatataatactgtatttcttggagaatttatgcagccagactgggacatg 1066 Query: 357 ttccat 362 |||||| Sbjct: 1067 ttccat 1072
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Minus Query: 237 gttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacacatc 296 ||||||||||| ||| |||||||||| || ||||| | || || ||||| ||||| || Sbjct: 13637197 gttgtgagagcttctaatgatttctgacccagagaacatgcctcacatactatacatatt 13637138 Query: 297 gcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggacatg 356 |||||||| || || || ||||| || |||||||| || |||||||| |||||||||||| Sbjct: 13637137 gcatctgttgcatataatactgtatttcttggagaatttatgcagccagactgggacatg 13637078 Query: 357 ttccat 362 |||||| Sbjct: 13637077 ttccat 13637072
>gb|BT009329.1| Triticum aestivum clone wlm24.pk0021.h1:fis, full insert mRNA sequence Length = 2668 Score = 79.8 bits (40), Expect = 8e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||| | |||||| | || ||||| |||||||| | ||||| || Sbjct: 1530 gacccggcgtcgcacaccgtccacatctcctccgtcgcttacaacacgctcttcctcggc 1589 Query: 330 gagttcatgcagcctgactgggacatgttccatagcgttcacccaatggcggaataccac 389 |||||||||||||| ||||||||||||||||||||| | ||||| |||||| |||||| Sbjct: 1590 gagttcatgcagcccgactgggacatgttccatagcctgcacccggcggcggagtaccac 1649 Query: 390 gccgcggc 397 | |||||| Sbjct: 1650 ggcgcggc 1657
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3 Length = 196149 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 258 ttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaacact 317 ||||||| |||||| || ||||| || || || ||||| || ||||| || || ||||| Sbjct: 143980 ttctggcatagagatccggcttcacacacgatccacattgcttctgttgcatataacaca 143921 Query: 318 gttttccttggagagttcatgcagcctgactgggacatgttccata 363 |||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 143920 cttttccttggagagtttatgcagccggactgggacatgtttcata 143875
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 285 accatacacatcgcatctgtcgcgtacaacactgttttccttggagagttcatgcagcct 344 ||||| ||| |||| || ||||| |||||||| || ||||| || |||||||||||||| Sbjct: 5924083 accatccacgtcgcctccgtcgcctacaacaccgtcttcctcggcgagttcatgcagccc 5924024 Query: 345 gactgggacatgttccat 362 |||||||||||||||||| Sbjct: 5924023 gactgggacatgttccat 5924006
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 285 accatacacatcgcatctgtcgcgtacaacactgttttccttggagagttcatgcagcct 344 ||||| ||| |||| || ||||| |||||||| || ||||| || |||||||||||||| Sbjct: 66531 accatccacgtcgcctccgtcgcctacaacaccgtcttcctcggcgagttcatgcagccc 66472 Query: 345 gactgggacatgttccat 362 |||||||||||||||||| Sbjct: 66471 gactgggacatgttccat 66454
>gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01 Length = 124225 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 258 ttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaacact 317 ||||||| |||||| || ||||| || || || ||||| || ||||| || || ||||| Sbjct: 43715 ttctggcatagagatccggcttcacacacgatccacattgcttctgttgcatataacaca 43774 Query: 318 gttttccttggagagttcatgcagcctgactgggacatgttccata 363 |||||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 43775 cttttccttggagagtttatgcagccggactgggacatgtttcata 43820
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||||| |||||| | || ||||| |||||||| | ||||| || Sbjct: 136472 gacccggcgtcgcacaccatccacatctcctccgtcgcctacaacaccctcttcctcggc 136413 Query: 330 gagttcatgcagcctgactgggacatgttcca 361 |||||||||||||| ||||||||||||||||| Sbjct: 136412 gagttcatgcagcccgactgggacatgttcca 136381
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||||| |||||| | || ||||| |||||||| | ||||| || Sbjct: 33528608 gacccggcgtcgcacaccatccacatctcctccgtcgcctacaacaccctcttcctcggc 33528667 Query: 330 gagttcatgcagcctgactgggacatgttcca 361 |||||||||||||| ||||||||||||||||| Sbjct: 33528668 gagttcatgcagcccgactgggacatgttcca 33528699
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||||| |||||| | || ||||| |||||||| | ||||| || Sbjct: 33619080 gacccggcgtcgcacaccatccacatctcctccgtcgcctacaacaccctcttcctcggc 33619139 Query: 330 gagttcatgcagcctgactgggacatgttcca 361 |||||||||||||| ||||||||||||||||| Sbjct: 33619140 gagttcatgcagcccgactgggacatgttcca 33619171
>dbj|AK065100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N01, full insert sequence Length = 2646 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||||| |||||| | || ||||| |||||||| | ||||| || Sbjct: 1473 gacccggcgtcgcacaccatccacatctcctccgtcgcctacaacaccctcttcctcggc 1532 Query: 330 gagttcatgcagcctgactgggacatgttcca 361 |||||||||||||| ||||||||||||||||| Sbjct: 1533 gagttcatgcagcccgactgggacatgttcca 1564
>ref|NM_148186.1| Arabidopsis thaliana unknown protein AT4G01265 mRNA, complete cds Length = 906 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 258 ttctggcctagagacccagcttcgcataccatacacatcgcatctgtcgcgtacaacact 317 ||||||| |||||| || ||||| || || || ||||| || ||||| || || ||||| Sbjct: 739 ttctggcatagagatccggcttcacacacgatccacattgcttctgttgcatataacaca 798 Query: 318 gttttccttggagagttcatgcagcctgactgggacat 355 |||||||||||||||| |||||||| ||||||||||| Sbjct: 799 cttttccttggagagtttatgcagccggactgggacat 836
>gb|M77475.1|BLYSIP1A Hordeum vulgare seed imbitition protein (Sip1) gene, complete cds Length = 4788 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 270 gacccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttgga 329 ||||| || ||||| ||| | |||||| | || ||||| |||||||| | ||||| || Sbjct: 3074 gacccggcgtcgcacaccgtccacatctcctccgtcgcctacaacacgctcttcctcggc 3133 Query: 330 gagttcatgcagcctgactgggacatgttccat 362 |||||||||||||| |||||||||||||||||| Sbjct: 3134 gagttcatgcagcccgactgggacatgttccat 3166
>emb|AJ133148.1|PAM133148 Persea americana mRNA for putative seed imbibition protein Length = 2673 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 321 ttccttggagagttcatgcagcctgactgggacatgttccatagcgttcacccaatggcg 380 ||||| ||||| ||||||||||| |||||||| |||||||||||| | |||||| ||| Sbjct: 1534 ttcctcggagaattcatgcagccggactgggatatgttccatagcttgcacccagctgcg 1593 Query: 381 gaatacca 388 |||||||| Sbjct: 1594 gaatacca 1601
>gb|AF497511.2| Zea mays alkaline alpha galactosidase 2 mRNA, complete cds Length = 2795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 235 cggttgtgagagcctctgatgatttctggcctagagacccagcttcgcataccatacaca 294 |||| ||||| || || ||||||||||| || || ||||| || ||||| || || || | Sbjct: 1723 cggtggtgagggcgtcggatgatttctgcccaagggaccccgcgtcgcacacgatccata 1782 Query: 295 tcgcatctgtcgcgtacaacactgttttccttggagagttcatgcagcctgactgggaca 354 |||| || || |||||||||| || ||||| || |||||||||| || |||||||||| Sbjct: 1783 tcgcctcggtggcgtacaacagcgtgttcctcggcgagttcatgctcccggactgggaca 1842 Query: 355 tgttcca 361 ||||||| Sbjct: 1843 tgttcca 1849
>ref|NM_122032.3| Arabidopsis thaliana DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds AT5G20250 (DIN10) transcript variant AT5G20250.2 mRNA, complete cds Length = 2716 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1728 ggagagtttatgcagcctgactgggatatgttccat 1763
>ref|NM_180713.2| Arabidopsis thaliana DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds AT5G20250 (DIN10) transcript variant AT5G20250.1 mRNA, complete cds Length = 2823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1831 ggagagtttatgcagcctgactgggatatgttccat 1866
>ref|NM_001036833.1| Arabidopsis thaliana DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds AT5G20250 (DIN10) transcript variant AT5G20250.3 mRNA, complete cds Length = 2833 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1841 ggagagtttatgcagcctgactgggatatgttccat 1876
>gb|BT000632.1| Arabidopsis thaliana seed imbibition protein-like (At5g20250/F5O24_140) mRNA, complete cds Length = 2535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1696 ggagagtttatgcagcctgactgggatatgttccat 1731
>gb|AY090237.1| Arabidopsis thaliana AT5g20250/F5O24_140 mRNA, complete cds Length = 2714 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1753 ggagagtttatgcagcctgactgggatatgttccat 1788
>dbj|AK221808.1| Arabidopsis thaliana mRNA for seed imbitition protein-like, partial cds, clone: RAFL21-87-P04 Length = 1187 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 217 ggagagtttatgcagcctgactgggatatgttccat 252
>emb|BX832541.1|CNS09YP2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 1559 ggagagtttatgcagcctgactgggatatgttccat 1594
>gb|AF159378.1|AF159378 Arabidopsis thaliana seed imbibition protein (din10) mRNA, partial cds Length = 850 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 778 ggagagtttatgcagcctgactgggatatgttccat 813
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 327 ggagagttcatgcagcctgactgggacatgttccat 362 |||||||| ||||||||||||||||| ||||||||| Sbjct: 40020 ggagagtttatgcagcctgactgggatatgttccat 40055
>gb|AY114164.1| Cucumis melo alkaline alpha galactosidase I (aga1) mRNA, partial cds Length = 2262 Score = 52.0 bits (26), Expect = 0.002 Identities = 140/178 (78%) Strand = Plus / Plus Query: 213 ttatacagttcaaaaagaaactcggttgtgagagcctctgatgatttctggcctagagac 272 |||||||||||||| ||||| | ||| | |||| || |||||||| ||||||||||| Sbjct: 1324 ttatacagttcaaagagaaatgctgttattcgagcatcggatgatttttggcctagagat 1383 Query: 273 ccagcttcgcataccatacacatcgcatctgtcgcgtacaacactgttttccttggagag 332 ||||| || || || || || || ||||| || || |||||| | | || ||||| ||| Sbjct: 1384 ccagcatctcacacgattcatatagcatcagttgcttacaactccttatttcttggggag 1443 Query: 333 ttcatgcagcctgactgggacatgttccatagcgttcacccaatggcggaataccacg 390 || |||||||| || ||||| ||||| ||||| |||| || ||||| ||||| |||| Sbjct: 1444 tttatgcagccagattgggatatgtttcatagtcttcatcctatggccgaatatcacg 1501
>emb|X95875.1|CASIMBIBP C.arietinum mRNA for seed imbibition protein Length = 1071 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 319 ttttccttggagagttcatgcagcctgactgggacatgttccatag 364 ||||||||||||| || ||||| || || ||||||||||||||||| Sbjct: 896 ttttccttggagaatttatgcaaccagattgggacatgttccatag 941 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgattt 259 |||||||||||||||||||||| Sbjct: 815 ttgtgagagcctctgatgattt 836
>emb|AJ271668.1|CAR271668 Cicer arietinum partial mRNA for putative imbibition protein Length = 1487 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 319 ttttccttggagagttcatgcagcctgactgggacatgttccatag 364 ||||||||||||| || ||||| || || ||||||||||||||||| Sbjct: 246 ttttccttggagaatttatgcaaccagattgggacatgttccatag 291 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 ttgtgagagcctctgatgattt 259 |||||||||||||||||||||| Sbjct: 165 ttgtgagagcctctgatgattt 186
>gb|BT009384.1| Triticum aestivum clone wlm96.pk033.h5:fis, full insert mRNA sequence Length = 2653 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 306 gcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcca 361 |||||||||| || ||||| || |||||||||| || ||||||||||||||||| Sbjct: 1644 gcgtacaacagcgtgttcctcggcgagttcatgctcccggactgggacatgttcca 1699
>gb|AY030360.1| Oryza sativa putative transmembrane protein mRNA, complete cds Length = 1330 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 caggctctagaagcttccatcgc 157 ||||||||||||||||||||||| Sbjct: 3 caggctctagaagcttccatcgc 25
>gb|AC125319.5| Mus musculus BAC clone RP23-472L3 from 5, complete sequence Length = 186202 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aggcagtggccatggtgggag 109 ||||||||||||||||||||| Sbjct: 65531 aggcagtggccatggtgggag 65551
>emb|AJ877709.1| Human immunodeficiency virus type 1 subtype A proviral partial gp120 gene for envelope glycoprotein gp120, isolate 02DC.KTB182 2002 Length = 663 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 ataacactgataacttataca 219 ||||||||||||||||||||| Sbjct: 410 ataacactgataacttataca 430
>gb|AC101970.11| Mus musculus chromosome 1, clone RP24-267G24, complete sequence Length = 167090 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 agagcctctgatgatttctg 262 |||||||||||||||||||| Sbjct: 64126 agagcctctgatgatttctg 64145
>ref|XM_362127.1| Magnaporthe grisea 70-15 predicted protein (MG04572.4) partial cds Length = 705 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 atacagttcaaaaagaaact 234 |||||||||||||||||||| Sbjct: 441 atacagttcaaaaagaaact 460
>gb|AC091005.9| Homo sapiens chromosome 15, clone RP11-1008C21, complete sequence Length = 168502 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ggcagtggccatggtgggag 109 |||||||||||||||||||| Sbjct: 119172 ggcagtggccatggtgggag 119153
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 306 gcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcca 361 |||||||||| || ||||| || |||||||||| || || |||||||||||||| Sbjct: 3676015 gcgtacaacagcgtattcctcggcgagttcatgctcccggattgggacatgttcca 3675960
>gb|AC078776.12|AC078776 Homo sapiens 12 BAC RP11-155I9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95801 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cagtggccatggtgggagag 111 |||||||||||||||||||| Sbjct: 70836 cagtggccatggtgggagag 70817
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 40.1 bits (20), Expect = 6.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 306 gcgtacaacactgttttccttggagagttcatgcagcctgactgggacatgttcca 361 |||||||||| || ||||| || |||||||||| || || |||||||||||||| Sbjct: 70243 gcgtacaacagcgtattcctcggcgagttcatgctcccggattgggacatgttcca 70188
>gb|BT024038.1| Zea mays clone EL01N0428D04 mRNA sequence Length = 1868 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 cctgactgggacatgttccatagc 365 ||||||||||| |||||||||||| Sbjct: 1500 cctgactgggatatgttccatagc 1523 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,354,453 Number of Sequences: 3902068 Number of extensions: 3354453 Number of successful extensions: 66915 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 66642 Number of HSP's gapped (non-prelim): 258 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)