ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016661.1| Zea mays clone Contig494 mRNA sequence 90 7e-15
2gb|BT017782.1| Zea mays clone EL01N0503E10.c mRNA sequence 84 4e-13
3ref|XM_480219.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.022
4dbj|AK071725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
5dbj|AK068520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
6gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
9dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
10gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
11dbj|AB005290.1| Oryza sativa (japonica cultivar-group) mRNA for ... 44 0.35
12gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.4
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
15dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.4
17dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18ref|NM_208906.1| Eremothecium gossypii ACR151Wp (ACR151W), mRNA 42 1.4
19gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.4
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
21emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.4
22gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 5.4
23ref|XM_473542.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
24gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
25ref|XM_424815.1| PREDICTED: Gallus gallus similar to KIAA0780 pr... 40 5.4
26gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
27gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
28gb|AE014075.1| Escherichia coli CFT073, complete genome 40 5.4
29emb|X52905.1|ECBET Escherichia coli betT, betI, betB and betA genes 40 5.4
30gb|CP000243.1| Escherichia coli UTI89, complete genome 40 5.4
31gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 5.4
32gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 5.4
33emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.4
34emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
35dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 5.4
36gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.4
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.4
40gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds 40 5.4
41dbj|AK120619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
42ref|NM_209222.1| Eremothecium gossypii ADL227Cp (ADL227C), mRNA 40 5.4
43dbj|AK069025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
44gb|U73857.1|ECU73857 Escherichia coli chromosome minutes 6-8 40 5.4
45gb|AY702079.1| Oikopleura dioica homeodomain protein Mnx (Mnx) g... 40 5.4
46gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
47gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 5.4
48dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 5.4
49gb|M77739.1|ECOBETB E.coli betaine aldehyde dehydrogenase (betB)... 40 5.4
50dbj|AB066661.2| Oryza sativa (japonica cultivar-group) OsRFC4 mR... 40 5.4 
>gb|BT016661.1| Zea mays clone Contig494 mRNA sequence
          Length = 1404

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                       
Query: 159 tcgccgatgcagcgcctcttcgacaccagccgcgaggtcttctccgcctccgccccaggc 218
           ||||| |||||| | ||||||||||||||| | ||||||||| ||  ||||  ||| |||
Sbjct: 279 tcgcccatgcagaggctcttcgacaccagcagggaggtcttcgccaactcctacccgggc 338

                                                                    
Query: 219 ttcgtccccccgcccgacgccgtcgcccgcctcgccgccatcctcaatgatctgaag 275
           |||||||| ||||| |||||||||||||||||| | | | |||||||||| ||||||
Sbjct: 339 ttcgtcccgccgccggacgccgtcgcccgcctctcgggcctcctcaatgagctgaag 395
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>gb|BT017782.1| Zea mays clone EL01N0503E10.c mRNA sequence
          Length = 1111

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctcttcgacaccagccgcgaggtcttctccgcctccgccccaggcttcgtccccccgccc 233
           ||||||||||||||| | ||||||||| ||  ||||  ||| ||||||||||| ||||| 
Sbjct: 52  ctcttcgacaccagcagggaggtcttcgccaactcctacccgggcttcgtcccgccgccg 111

                                                     
Query: 234 gacgccgtcgcccgcctcgccgccatcctcaatgatctgaag 275
           |||||||||||||||||| | | | |||||||||| ||||||
Sbjct: 112 gacgccgtcgcccgcctctcgggcctcctcaatgagctgaag 153
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>ref|XM_480219.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1923

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 230 gcccgacgccgtcgcccgcctcgc 253
           ||||||||||||||||||||||||
Sbjct: 377 gcccgacgccgtcgcccgcctcgc 400
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>dbj|AK071725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113B05, full
           insert sequence
          Length = 1923

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 230 gcccgacgccgtcgcccgcctcgc 253
           ||||||||||||||||||||||||
Sbjct: 377 gcccgacgccgtcgcccgcctcgc 400
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>dbj|AK068520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155I19, full
           insert sequence
          Length = 1626

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 219 ttcgtccccccgcccgacgccgtcgcccgcctcgccgccatcctcaatgatctgaa 274
           ||||| || |||||| | ||||||||||| ||||||||| | ||||||||| ||||
Sbjct: 491 ttcgtgccgccgccccaagccgtcgcccgactcgccgccctactcaatgatttgaa 546



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 173 cctcttcgacaccagccgcgaggtcttc 200
           |||||||||||||||| | |||||||||
Sbjct: 445 cctcttcgacaccagcagggaggtcttc 472
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
              complete sequence
          Length = 145070

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 239    cgtcgcccgcctcgccgccatcctca 264
              |||||||| |||||||||||||||||
Sbjct: 115521 cgtcgcccacctcgccgccatcctca 115546
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 232     ccgacgccgtcgcccgcctcgc 253
               ||||||||||||||||||||||
Sbjct: 3726704 ccgacgccgtcgcccgcctcgc 3726725
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 239     cgtcgcccgcctcgccgccatcctca 264
               |||||||| |||||||||||||||||
Sbjct: 4747516 cgtcgcccacctcgccgccatcctca 4747541



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 173      cctcttcgacaccagccgcgaggtcttc 200
                |||||||||||||||| | |||||||||
Sbjct: 29287125 cctcttcgacaccagcagggaggtcttc 29287152
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>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ9990_A01
          Length = 101684

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 232   ccgacgccgtcgcccgcctcgc 253
             ||||||||||||||||||||||
Sbjct: 50201 ccgacgccgtcgcccgcctcgc 50222
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 239   cgtcgcccgcctcgccgccatcctca 264
             |||||||| |||||||||||||||||
Sbjct: 19924 cgtcgcccacctcgccgccatcctca 19949
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>dbj|AB005290.1| Oryza sativa (japonica cultivar-group) mRNA for plastid RNA
           polymerase sigma factor, complete cds
          Length = 2026

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 232 ccgacgccgtcgcccgcctcgc 253
           ||||||||||||||||||||||
Sbjct: 484 ccgacgccgtcgcccgcctcgc 505
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    cccgcctcgccgccatcctca 264
              |||||||||||||||||||||
Sbjct: 618209 cccgcctcgccgccatcctca 618229
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 236      cgccgtcgcccgcctcgccgccatc 260
                |||||||||| ||||||||||||||
Sbjct: 25729225 cgccgtcgccagcctcgccgccatc 25729249
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 236      cgccgtcgcccgcctcgccgccatc 260
                |||||||||| ||||||||||||||
Sbjct: 10879217 cgccgtcgccagcctcgccgccatc 10879193
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0512H04
          Length = 151049

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 236    cgccgtcgcccgcctcgccgccatc 260
              |||||||||| ||||||||||||||
Sbjct: 102940 cgccgtcgccagcctcgccgccatc 102916
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 21     ggcgaccccgtgggcgtgggc 41
              |||||||||||||||||||||
Sbjct: 627117 ggcgaccccgtgggcgtgggc 627137
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>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0698G06
          Length = 138282

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 236   cgccgtcgcccgcctcgccgccatc 260
             |||||||||| ||||||||||||||
Sbjct: 18922 cgccgtcgccagcctcgccgccatc 18898
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>ref|NM_208906.1| Eremothecium gossypii ACR151Wp (ACR151W), mRNA
          Length = 2649

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 244  cccgcctcgccgccatcctca 264
            |||||||||||||||||||||
Sbjct: 1865 cccgcctcgccgccatcctca 1885
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 232    ccgacgccgtcgcccgcctcgccgc 256
              |||||||||||||| ||||||||||
Sbjct: 381675 ccgacgccgtcgccggcctcgccgc 381651
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 236      cgccgtcgcccgcctcgccgccatc 260
                |||||||||| ||||||||||||||
Sbjct: 25657401 cgccgtcgccagcctcgccgccatc 25657425
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 236   cgccgtcgcccgcctcgccgccatc 260
             |||||||||| ||||||||||||||
Sbjct: 96463 cgccgtcgccagcctcgccgccatc 96487
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    gaggcgaccccgtgggcgtgggcg 42
             |||||||||||||||||| |||||
Sbjct: 24550 gaggcgaccccgtgggcgggggcg 24527
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>ref|XM_473542.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 ccgacgccgtcgcccgcctc 251
           ||||||||||||||||||||
Sbjct: 104 ccgacgccgtcgcccgcctc 123
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>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0082P17, complete sequence
          Length = 157539

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cgccgtcgcccgcctcgccg 255
             ||||||||||||||||||||
Sbjct: 24710 cgccgtcgcccgcctcgccg 24729
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>ref|XM_424815.1| PREDICTED: Gallus gallus similar to KIAA0780 protein (LOC427231),
           mRNA
          Length = 3345

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 49  ccgccccgtcccgcaggaaccgcaggcg 76
           |||||||||||||||| | |||||||||
Sbjct: 328 ccgccccgtcccgcagcagccgcaggcg 301
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 173   cctcttcgacaccagccgcgaggtcttc 200
             |||||||||||||||| | |||||||||
Sbjct: 65782 cctcttcgacaccagcagggaggtcttc 65809
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>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030I07, complete sequence
          Length = 122733

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cgccgtcgcccgcctcgccg 255
             ||||||||||||||||||||
Sbjct: 76691 cgccgtcgcccgcctcgccg 76710
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 418608 gggcgtgggcgcggagaccg 418589
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>emb|X52905.1|ECBET Escherichia coli betT, betI, betB and betA genes
          Length = 7412

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gggcgtgggcgcggagaccg 51
            ||||||||||||||||||||
Sbjct: 4634 gggcgtgggcgcggagaccg 4653
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 354082 gggcgtgggcgcggagaccg 354063
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 231    cccgacgccgtcgcccgcctcgcc 254
              ||||||||| ||||||||||||||
Sbjct: 302120 cccgacgccttcgcccgcctcgcc 302097
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 327340 gggcgtgggcgcggagaccg 327321
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    cgacgccgtcgcccgcctcg 252
              ||||||||||||||||||||
Sbjct: 182963 cgacgccgtcgcccgcctcg 182982
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>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06,
             complete sequence
          Length = 125196

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ccgacgccgtcgcccgcctc 251
             ||||||||||||||||||||
Sbjct: 61535 ccgacgccgtcgcccgcctc 61554
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 327340 gggcgtgggcgcggagaccg 327321
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    ccgtcgcccgcctcgccgcc 257
              ||||||||||||||||||||
Sbjct: 307447 ccgtcgcccgcctcgccgcc 307466
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 232      ccgacgccgtcgcccgcctc 251
                ||||||||||||||||||||
Sbjct: 28570745 ccgacgccgtcgcccgcctc 28570764
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 236      cgccgtcgcccgcctcgccg 255
                ||||||||||||||||||||
Sbjct: 26614433 cgccgtcgcccgcctcgccg 26614452
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     cgacgccgtcgcccgcctcg 252
               ||||||||||||||||||||
Sbjct: 5707910 cgacgccgtcgcccgcctcg 5707891



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     cgccgtcgcccgcctcgccg 255
               ||||||||||||||||||||
Sbjct: 5438782 cgccgtcgcccgcctcgccg 5438763



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     cgccgtcgcccgcctcgccg 255
               ||||||||||||||||||||
Sbjct: 4893136 cgccgtcgcccgcctcgccg 4893117
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>gb|AF525215.1| Takifugu rubripes Mx (Mx) gene, complete cds
          Length = 80367

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 231  cccgacgccgtcgcccgcctcgcc 254
            ||||| ||||||||||||||||||
Sbjct: 7364 cccgaggccgtcgcccgcctcgcc 7387
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>dbj|AK120619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152C07, full
           insert sequence
          Length = 1953

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 cgccgtcgcccgcctcgccg 255
           ||||||||||||||||||||
Sbjct: 931 cgccgtcgcccgcctcgccg 950
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>ref|NM_209222.1| Eremothecium gossypii ADL227Cp (ADL227C), mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ccgtcgcccgcctcgccgcc 257
           ||||||||||||||||||||
Sbjct: 329 ccgtcgcccgcctcgccgcc 310
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>dbj|AK069025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002F18, full
           insert sequence
          Length = 1322

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 ccgacgccgtcgcccgcctc 251
           ||||||||||||||||||||
Sbjct: 143 ccgacgccgtcgcccgcctc 162
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>gb|U73857.1|ECU73857 Escherichia coli chromosome minutes 6-8
          Length = 128824

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gggcgtgggcgcggagaccg 51
             ||||||||||||||||||||
Sbjct: 35913 gggcgtgggcgcggagaccg 35894
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>gb|AY702079.1| Oikopleura dioica homeodomain protein Mnx (Mnx) gene, complete cds
          Length = 1817

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  cagaagaagtcctccaacac 97
           ||||||||||||||||||||
Sbjct: 189 cagaagaagtcctccaacac 208
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 236      cgccgtcgcccgcctcgccg 255
                ||||||||||||||||||||
Sbjct: 26939697 cgccgtcgcccgcctcgccg 26939716
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 375782 gggcgtgggcgcggagaccg 375763
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggcgtgggcgcggagaccg 51
              ||||||||||||||||||||
Sbjct: 375780 gggcgtgggcgcggagaccg 375761
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>gb|M77739.1|ECOBETB E.coli betaine aldehyde dehydrogenase (betB) gene, complete cds
          Length = 1854

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gggcgtgggcgcggagaccg 51
            ||||||||||||||||||||
Sbjct: 999  gggcgtgggcgcggagaccg 1018
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>dbj|AB066661.2| Oryza sativa (japonica cultivar-group) OsRFC4 mRNA for replication
           factor C 40kDa subunit, complete cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 ccgacgccgtcgcccgcctc 251
           ||||||||||||||||||||
Sbjct: 166 ccgacgccgtcgcccgcctc 185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,112,675
Number of Sequences: 3902068
Number of extensions: 2112675
Number of successful extensions: 46073
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45111
Number of HSP's gapped (non-prelim): 962
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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