ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|D37943.1|WHTPH2B8B Triticum aestivum mRNA for protein H2B-8,... 72 3e-10
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-06
3dbj|D29712.1|RICYK24 Oryza sativa mRNA, partial homologous to hi... 60 1e-06
4dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-06
5dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-06
6dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-06
7gb|AF356819.1|AF356819 Lolium perenne histone H2B-3 mRNA, partia... 58 5e-06
8gb|AF356820.1|AF356820 Lolium perenne histone H2B-4 mRNA, partia... 54 8e-05
9gb|BT016478.1| Zea mays clone Contig311 mRNA sequence 52 3e-04
10gb|BT017477.1| Zea mays clone EL01N0408F05.c mRNA sequence 52 3e-04
11gb|BT009118.1| Triticum aestivum clone wl1n.pk0003.e12:fis, full... 52 3e-04
12gb|U08226.1|ZMU08226 Zea mays W-22 histone H2B mRNA, complete cds 52 3e-04
13dbj|AB075378.1| Oryza sativa OsH2B mRNA for histone H2B, complet... 52 3e-04
14gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.001
15gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.001
16emb|X57312.1|ZMH2B214 Z.mays mRNA for H2B histone (clone cH2B214) 50 0.001
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.001
18ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
19ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
20ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
21ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
22ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
23ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.005
24ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predic... 48 0.005
25gb|BT016350.1| Zea mays clone Contig183 mRNA sequence 48 0.005
26emb|X57313.1|ZMH2B221 Z.mays mRNA for H2B histone (clone cH2B221) 48 0.005
27dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.005
28dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.005
29emb|X69960.1|ZMH2B3A Z.mays gene for H2B histone (gH2B3) 46 0.020
30ref|NM_190523.1| Oryza sativa (japonica cultivar-group), predic... 44 0.077
31gb|AY020487.1| Oryza sativa microsatellite MRG2812 containing (G... 44 0.077
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.077
33gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.077
34gb|AF356818.1|AF356818 Lolium perenne histone H2B-2 mRNA, partia... 44 0.077
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.077
36dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.077
37gb|AY389709.1| Hyacinthus orientalis histone H2B mRNA, partial cds 42 0.30
38gb|AY545588.1| Crithidia fasciculata elongation factor 1B gamma ... 42 0.30
39gb|AY545587.1| Crithidia fasciculata elongation factor 1B gamma ... 42 0.30
40emb|AJ854486.1| Human adenovirus type 9 complete genome 42 0.30
41emb|AJ297857.1|LIN297857 Leishmania infantum mRNA for elongation... 42 0.30
42gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 0.30
43gb|AF356821.1|AF356821 Lolium perenne histone H2B-5 mRNA, partia... 42 0.30
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.30
45dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.30
46dbj|AB110079.1| Human adenovirus type 8 genes for 100k 18.6 k, p... 42 0.30
47dbj|AB097769.1| Human adenovirus type 8E pVIII, A1, A2, A3, A4, ... 42 0.30
48gb|AF108105.1|AF108105 Human adenovirus type 17 complete genome 42 0.30
49ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.2
50gb|DQ058417.1| Rhizobium etli strain 8C-3 plasmid clone REB03, p... 40 1.2
51emb|X69961.1|SMH2B4A Z.mays gene for H2B histone (gH2B4) 40 1.2
52emb|X59873.1|TAHISTH2B T.aestivum L mRNA for histone H2B 40 1.2
53gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasm... 40 1.2
54gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 1.2
55ref|XM_475367.1| Oryza sativa (japonica cultivar-group), predic... 38 4.8
56gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15... 38 4.8
57gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 38 4.8
58gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P... 38 4.8
59ref|XM_361136.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 4.8
60gb|BC052852.1| Mus musculus protein phosphatase 2A, regulatory s... 38 4.8
61gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.8
62ref|XM_849209.1| PREDICTED: Canis familiaris similar to Unc119c ... 38 4.8
63ref|XM_821081.1| Trypanosoma brucei TREU927 clone RPCI93-30P12 p... 38 4.8
64gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosom... 38 4.8
65gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 38 4.8
66emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 38 4.8
67gb|AF466752.1| Rhizobium leguminosarum bv. viciae strain UPM791 ... 38 4.8
68gb|BC006626.1| Mus musculus protein phosphatase 2A, regulatory s... 38 4.8
69dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 4.8
70dbj|AK150029.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 38 4.8
71dbj|AK160980.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 38 4.8
72dbj|AK031591.1| Mus musculus 13 days embryo male testis cDNA, RI... 38 4.8
73dbj|AK049184.1| Mus musculus ES cells cDNA, RIKEN full-length en... 38 4.8
74gb|AC118458.2| Homo sapiens chromosome 5 clone CTD-2546F11, comp... 38 4.8
75dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 4.8
76emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chr... 38 4.8
77emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 38 4.8
78gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, comple... 38 4.8
79ref|NM_138748.2| Mus musculus protein phosphatase 2A, regulatory... 38 4.8 
>dbj|D37943.1|WHTPH2B8B Triticum aestivum mRNA for protein H2B-8, complete cds
          Length = 592

 Score = 71.9 bits (36), Expect = 3e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 63  agcagcagcggcatcgatggcccccaaggcggagaagaagccgg 106
           |||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 47  agcagccgcggcatccatggcccccaaggcggagaagaagccgg 90
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 69      agcggcatcgatggcccccaaggcggagaagaagccgg 106
               ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 2819706 agcggcatccatggcgcccaaggcggagaagaagccgg 2819669



 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 65      cagcagcggcatcgatggcccccaaggcggagaagaagccgg 106
               ||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 2673465 cagcagcggcatccatggcgcccaaggcagagaagaagccgg 2673506



 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                    
Query: 70      gcggcatcgatggcccccaaggcggagaagaagccgg 106
               |||||||| ||||| ||||||||||||||||||||||
Sbjct: 2837516 gcggcatccatggcgcccaaggcggagaagaagccgg 2837480



 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 66      agcagcggcatcgatggcccccaaggcggagaagaagccgg 106
               |||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 2685789 agcagcggcagccatggcgcccaaggcggagaagaagccgg 2685829



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 73      gcatcgatggcccccaaggcggagaagaagccgg 106
               ||||| ||||| ||||||||||||||||||||||
Sbjct: 2871182 gcatccatggcgcccaaggcggagaagaagccgg 2871215



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 73      gcatcgatggcccccaaggcggagaagaagccgg 106
               ||||| ||||| ||||||||||||||||||||||
Sbjct: 2857065 gcatccatggcgcccaaggcggagaagaagccgg 2857032



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 73      gcatcgatggcccccaaggcggagaagaagccgg 106
               ||||| ||||| ||||||||||||||||||||||
Sbjct: 2844126 gcatccatggcgcccaaggcggagaagaagccgg 2844093



 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 77       cgatggcccccaaggcggagaagaagcc 104
                ||||||| ||||||||||||||||||||
Sbjct: 36007853 cgatggcgcccaaggcggagaagaagcc 36007826



 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 77       cgatggcccccaaggcggagaagaagccgg 106
                ||||||| |||||||| |||||||||||||
Sbjct: 17422125 cgatggcgcccaaggcagagaagaagccgg 17422096
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>dbj|D29712.1|RICYK24 Oryza sativa mRNA, partial homologous to histone H2B gene
          Length = 271

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 65  cagcagcggcatcgatggcccccaaggcggagaagaagccgg 106
           ||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 52  cagcagcggcatccatggcgcccaaggcagagaagaagccgg 93
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>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0030H07
          Length = 168253

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 69    agcggcatcgatggcccccaaggcggagaagaagccgg 106
             ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 26704 agcggcatccatggcgcccaaggcggagaagaagccgg 26667



 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 70    gcggcatcgatggcccccaaggcggagaagaagccgg 106
             |||||||| ||||| ||||||||||||||||||||||
Sbjct: 44514 gcggcatccatggcgcccaaggcggagaagaagccgg 44478



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 73    gcatcgatggcccccaaggcggagaagaagccgg 106
             ||||| ||||| ||||||||||||||||||||||
Sbjct: 78180 gcatccatggcgcccaaggcggagaagaagccgg 78213



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 73    gcatcgatggcccccaaggcggagaagaagccgg 106
             ||||| ||||| ||||||||||||||||||||||
Sbjct: 64063 gcatccatggcgcccaaggcggagaagaagccgg 64030



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 73    gcatcgatggcccccaaggcggagaagaagccgg 106
             ||||| ||||| ||||||||||||||||||||||
Sbjct: 51124 gcatccatggcgcccaaggcggagaagaagccgg 51091
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434B04
          Length = 167029

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 65     cagcagcggcatcgatggcccccaaggcggagaagaagccgg 106
              ||||||||||||| ||||| |||||||| |||||||||||||
Sbjct: 123240 cagcagcggcatccatggcgcccaaggcagagaagaagccgg 123281



 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                       
Query: 66     agcagcggcatcgatggcccccaaggcggagaagaagccgg 106
              |||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 135564 agcagcggcagccatggcgcccaaggcggagaagaagccgg 135604
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>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0009G03
          Length = 163526

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 69     agcggcatcgatggcccccaaggcggagaagaagccgg 106
              ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 125383 agcggcatccatggcgcccaaggcggagaagaagccgg 125346



 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 70     gcggcatcgatggcccccaaggcggagaagaagccgg 106
              |||||||| ||||| ||||||||||||||||||||||
Sbjct: 143193 gcggcatccatggcgcccaaggcggagaagaagccgg 143157



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 73     gcatcgatggcccccaaggcggagaagaagccgg 106
              ||||| ||||| ||||||||||||||||||||||
Sbjct: 162742 gcatccatggcgcccaaggcggagaagaagccgg 162709



 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 73     gcatcgatggcccccaaggcggagaagaagccgg 106
              ||||| ||||| ||||||||||||||||||||||
Sbjct: 149803 gcatccatggcgcccaaggcggagaagaagccgg 149770
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>gb|AF356819.1|AF356819 Lolium perenne histone H2B-3 mRNA, partial cds
          Length = 397

 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 50  ctctccccggcgaagcagcagcggcatcgatggcccccaaggcggagaagaagccgg 106
           ||||||||| |||||||||||| ||  | ||||| |||||||| |||||||||||||
Sbjct: 54  ctctccccgtcgaagcagcagcagctcccatggcgcccaaggcagagaagaagccgg 110
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>gb|AF356820.1|AF356820 Lolium perenne histone H2B-4 mRNA, partial cds
          Length = 299

 Score = 54.0 bits (27), Expect = 8e-05
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 50  ctctccccggcgaagcagcagcggcatcgatggcccccaaggcggagaagaagcc 104
           ||||||||| |||||||||||| ||  | ||||| |||||||| |||||||||||
Sbjct: 46  ctctccccgtcgaagcagcagcagctcccatggcgcccaaggcagagaagaagcc 100
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>gb|BT016478.1| Zea mays clone Contig311 mRNA sequence
          Length = 836

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 73  gcatcgatggcccccaaggcggagaagaagccgg 106
           ||||||||||| |||||||||||||| |||||||
Sbjct: 94  gcatcgatggcgcccaaggcggagaaaaagccgg 127
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>gb|BT017477.1| Zea mays clone EL01N0408F05.c mRNA sequence
          Length = 574

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 77  cgatggcccccaaggcggagaagaagccgg 106
           ||||||| ||||||||||||||||||||||
Sbjct: 66  cgatggcacccaaggcggagaagaagccgg 95
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>gb|BT009118.1| Triticum aestivum clone wl1n.pk0003.e12:fis, full insert mRNA
           sequence
          Length = 764

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 69  agcggcatcgatggcccccaaggcggagaagaagccgg 106
           ||||| || |||||| ||||||||||||||||||||||
Sbjct: 78  agcggtattgatggcgcccaaggcggagaagaagccgg 115
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>gb|U08226.1|ZMU08226 Zea mays W-22 histone H2B mRNA, complete cds
          Length = 678

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 69  agcggcatcgatggcccccaaggcggagaagaagccgg 106
           ||||| || |||||| ||||||||||||||||||||||
Sbjct: 11  agcggtattgatggcgcccaaggcggagaagaagccgg 48
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>dbj|AB075378.1| Oryza sativa OsH2B mRNA for histone H2B, complete cds
          Length = 552

 Score = 52.0 bits (26), Expect = 3e-04
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 73  gcatcgatggcccccaaggcggagaagaagccgg 106
           ||||| ||||| ||||||||||||||||||||||
Sbjct: 11  gcatccatggcgcccaaggcggagaagaagccgg 44
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 74     catcgatggcccccaaggcggagaagaagccgg 106
              |||| ||||| ||||||||||||||||||||||
Sbjct: 175944 catccatggcgcccaaggcggagaagaagccgg 175976
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>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
             complete sequence
          Length = 119500

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 74    catcgatggcccccaaggcggagaagaagccgg 106
             |||| ||||| ||||||||||||||||||||||
Sbjct: 26626 catccatggcgcccaaggcggagaagaagccgg 26658
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>emb|X57312.1|ZMH2B214 Z.mays mRNA for H2B histone (clone cH2B214)
          Length = 580

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 78  gatggcccccaaggcggagaagaagccgg 106
           |||||| ||||||||||||||||||||||
Sbjct: 3   gatggcacccaaggcggagaagaagccgg 31
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 74       catcgatggcccccaaggcggagaagaagccgg 106
                |||| ||||| ||||||||||||||||||||||
Sbjct: 28391702 catccatggcgcccaaggcggagaagaagccgg 28391734



 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 88       aaggcggagaagaagccgg 106
                |||||||||||||||||||
Sbjct: 22480049 aaggcggagaagaagccgg 22480067
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>ref|NM_184409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 468

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|NM_184407.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|NM_184405.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|NM_184403.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|NM_184399.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|NM_184374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
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>ref|XM_475912.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 459

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| ||||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagccgg 28
to top
>gb|BT016350.1| Zea mays clone Contig183 mRNA sequence
          Length = 706

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 73  gcatcgatggcccccaaggcggagaagaagcc 104
           ||||||||||| |||||||| |||||||||||
Sbjct: 56  gcatcgatggcgcccaaggccgagaagaagcc 87
to top
>emb|X57313.1|ZMH2B221 Z.mays mRNA for H2B histone (clone cH2B221)
          Length = 653

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 73  gcatcgatggcccccaaggcggagaagaagcc 104
           ||||||||||| |||||||| |||||||||||
Sbjct: 12  gcatcgatggcgcccaaggccgagaagaagcc 43
to top
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 77    cgatggcccccaaggcggagaagaagcc 104
             ||||||| ||||||||||||||||||||
Sbjct: 20578 cgatggcgcccaaggcggagaagaagcc 20551
to top
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031D11
          Length = 138108

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 77     cgatggcccccaaggcggagaagaagcc 104
              ||||||| ||||||||||||||||||||
Sbjct: 106531 cgatggcgcccaaggcggagaagaagcc 106504
to top
>emb|X69960.1|ZMH2B3A Z.mays gene for H2B histone (gH2B3)
          Length = 1728

 Score = 46.1 bits (23), Expect = 0.020
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 76  tcgatggcccccaaggcggagaagaagccgg 106
           |||||||| ||||||||||| ||||||||||
Sbjct: 32  tcgatggcacccaaggcggacaagaagccgg 62
to top
>ref|NM_190523.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 420

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 79  atggcccccaaggcggagaagaagcc 104
           ||||| ||||||||||||||||||||
Sbjct: 1   atggcgcccaaggcggagaagaagcc 26
to top
>gb|AY020487.1| Oryza sativa microsatellite MRG2812 containing (GA)X20, closest to
           marker R134, genomic sequence
          Length = 240

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 77  cgatggcccccaaggcggagaagaagccgg 106
           ||||||| |||||||| |||||||||||||
Sbjct: 70  cgatggcgcccaaggcagagaagaagccgg 41
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 77      cgatggcccccaaggcggagaagaagccgg 106
               ||||||| |||||||| |||||||||||||
Sbjct: 9464873 cgatggcgcccaaggcagagaagaagccgg 9464902
to top
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 77     cgatggcccccaaggcggagaagaagccgg 106
              ||||||| |||||||| |||||||||||||
Sbjct: 162273 cgatggcgcccaaggcagagaagaagccgg 162302
to top
>gb|AF356818.1|AF356818 Lolium perenne histone H2B-2 mRNA, partial cds
          Length = 402

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 77  cgatggcccccaaggcggagaagaagccgg 106
           ||||||| |||||||| |||||||||||||
Sbjct: 80  cgatggcacccaaggccgagaagaagccgg 109
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 77      cgatggcccccaaggcggagaagaagccgg 106
               ||||||| |||||||| |||||||||||||
Sbjct: 9462994 cgatggcgcccaaggcagagaagaagccgg 9463023
to top
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0507H06
          Length = 136351

 Score = 44.1 bits (22), Expect = 0.077
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 77    cgatggcccccaaggcggagaagaagccgg 106
             ||||||| |||||||| |||||||||||||
Sbjct: 75517 cgatggcgcccaaggcagagaagaagccgg 75488
to top
>gb|AY389709.1| Hyacinthus orientalis histone H2B mRNA, partial cds
          Length = 627

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  tggcccccaaggcggagaagaagcc 104
           |||| ||||||||||||||||||||
Sbjct: 52  tggcgcccaaggcggagaagaagcc 76
to top
>gb|AY545588.1| Crithidia fasciculata elongation factor 1B gamma 2 gene, complete
           cds
          Length = 1263

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  cccaaggcggagaagaagccg 105
           |||||||||||||||||||||
Sbjct: 673 cccaaggcggagaagaagccg 693
to top
>gb|AY545587.1| Crithidia fasciculata elongation factor 1B gamma 1 mRNA, partial
           cds
          Length = 1317

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  cccaaggcggagaagaagccg 105
           |||||||||||||||||||||
Sbjct: 812 cccaaggcggagaagaagccg 832
to top
>emb|AJ854486.1| Human adenovirus type 9 complete genome
          Length = 35083

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    ccgcagctctccccggcgaagcagc 68
             ||||||||||||| |||||||||||
Sbjct: 26272 ccgcagctctcccgggcgaagcagc 26248
to top
>emb|AJ297857.1|LIN297857 Leishmania infantum mRNA for elongation factor-1 gamma (ef1g gene)
          Length = 2395

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  cccaaggcggagaagaagccg 105
           |||||||||||||||||||||
Sbjct: 831 cccaaggcggagaagaagccg 851
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 82      gcccccaaggcggagaagaagccgg 106
               |||||||||||||||||||| ||||
Sbjct: 3241182 gcccccaaggcggagaagaaaccgg 3241206
to top
>gb|AF356821.1|AF356821 Lolium perenne histone H2B-5 mRNA, partial cds
          Length = 375

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 68  cagcggcatcgatggcccccaaggcggagaagaagcc 104
           |||| ||||| ||||| |||||||| |||||||||||
Sbjct: 65  cagcagcatcaatggcgcccaaggcagagaagaagcc 101
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 76       tcgatggcccccaaggcggagaagaagcc 104
                |||||||| |||||||| |||||||||||
Sbjct: 24254169 tcgatggcgcccaaggccgagaagaagcc 24254197
to top
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0605H02
          Length = 175547

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 76     tcgatggcccccaaggcggagaagaagcc 104
              |||||||| |||||||| |||||||||||
Sbjct: 120508 tcgatggcgcccaaggccgagaagaagcc 120536
to top
>dbj|AB110079.1| Human adenovirus type 8 genes for 100k 18.6 k, pVIII 24.6, E3A1
            12.2k, E3A2 21.9k, E3A3 gp17.7k, E3B1-1 49.8k, E3B1-2
            30.8k,E3B2-1 10.4k, E3B2-2 14.6k, E3B2-3 14.7k, fiber
            26.4k, partial and complete cds
          Length = 6726

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 44   ccgcagctctccccggcgaagcagc 68
            ||||||||||||| |||||||||||
Sbjct: 1282 ccgcagctctcccgggcgaagcagc 1258
to top
>dbj|AB097769.1| Human adenovirus type 8E pVIII, A1, A2, A3, A4, A5, B1, B2, B3,
           fiber genes, partial and complete cds, E3 region
          Length = 5646

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 44  ccgcagctctccccggcgaagcagc 68
           ||||||||||||| |||||||||||
Sbjct: 473 ccgcagctctcccgggcgaagcagc 449
to top
>gb|AF108105.1|AF108105 Human adenovirus type 17 complete genome
          Length = 35100

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 44    ccgcagctctccccggcgaagcagc 68
             ||||||||||||| |||||||||||
Sbjct: 26242 ccgcagctctcccgggcgaagcagc 26218
to top
>ref|NM_184371.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 462

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| |||||||| |||||||||||||
Sbjct: 1   atggcgcccaaggcagagaagaagccgg 28
to top
>gb|DQ058417.1| Rhizobium etli strain 8C-3 plasmid clone REB03, partial sequence
          Length = 44733

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aagcagcagcggcatcgatg 81
             ||||||||||||||||||||
Sbjct: 21241 aagcagcagcggcatcgatg 21222
to top
>emb|X69961.1|SMH2B4A Z.mays gene for H2B histone (gH2B4)
          Length = 2361

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 77  cgatggcccccaaggcggagaagaagcc 104
           ||||||| |||||||| |||||||||||
Sbjct: 963 cgatggcgcccaaggccgagaagaagcc 990
to top
>emb|X59873.1|TAHISTH2B T.aestivum L mRNA for histone H2B
          Length = 712

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 79  atggcccccaaggcggagaagaagccgg 106
           ||||| |||||||| |||||||||||||
Sbjct: 65  atggcgcccaaggccgagaagaagccgg 92
to top
>gb|U80928.5|REU80928 Rhizobium etli strain CFN42 symbiotic plasmid p42d, complete sequence
          Length = 371254

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     aagcagcagcggcatcgatg 81
              ||||||||||||||||||||
Sbjct: 349499 aagcagcagcggcatcgatg 349518
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      cccaaggcggagaagaagcc 104
               ||||||||||||||||||||
Sbjct: 2170864 cccaaggcggagaagaagcc 2170845
to top
>ref|XM_475367.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 375

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  aaggcggagaagaagccgg 106
           |||||||||||||||||||
Sbjct: 10  aaggcggagaagaagccgg 28
to top
>gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15, complete
           sequence
          Length = 157158

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  cccgcagctctccccggcg 61
           |||||||||||||||||||
Sbjct: 726 cccgcagctctccccggcg 708
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 43     cccgcagctctccccggcg 61
              |||||||||||||||||||
Sbjct: 421150 cccgcagctctccccggcg 421168
to top
>gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P12, complete sequence
          Length = 165197

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    cccgcagctctccccggcg 61
             |||||||||||||||||||
Sbjct: 15196 cccgcagctctccccggcg 15214
to top
>ref|XM_361136.1| Magnaporthe grisea 70-15 hypothetical protein (MG03679.4) partial
           mRNA
          Length = 978

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 86  ccaaggcggagaagaagcc 104
           |||||||||||||||||||
Sbjct: 653 ccaaggcggagaagaagcc 671
to top
>gb|BC052852.1| Mus musculus protein phosphatase 2A, regulatory subunit B (PR 53),
           mRNA (cDNA clone MGC:60706 IMAGE:30058414), complete cds
          Length = 2529

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 127 ccccgcagctctccccggc 109
to top
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
             complete sequence
          Length = 163130

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    aaggcggagaagaagccgg 106
             |||||||||||||||||||
Sbjct: 69456 aaggcggagaagaagccgg 69474
to top
>ref|XM_849209.1| PREDICTED: Canis familiaris similar to Unc119c (LOC611530), mRNA
          Length = 1336

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 80  tggcccccaaggcggagaagaag 102
           |||||||||||| ||||||||||
Sbjct: 192 tggcccccaaggaggagaagaag 214
to top
>ref|XM_821081.1| Trypanosoma brucei TREU927 clone RPCI93-30P12 protein kinase
           (Tb927.3.1610) partial mRNA
          Length = 1980

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 43  cccgcagctctccccggcg 61
           |||||||||||||||||||
Sbjct: 630 cccgcagctctccccggcg 612
to top
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 81     ggcccccaaggcggagaagaagc 103
              |||||||| ||||||||||||||
Sbjct: 189354 ggcccccagggcggagaagaagc 189376
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 64      gcagcagcggcatcgatgg 82
               |||||||||||||||||||
Sbjct: 2907844 gcagcagcggcatcgatgg 2907862
to top
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     aaggcggagaagaagccgg 106
              |||||||||||||||||||
Sbjct: 173412 aaggcggagaagaagccgg 173430
to top
>gb|AF466752.1| Rhizobium leguminosarum bv. viciae strain UPM791 fbc operon, partial
            sequence
          Length = 2885

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 88   aaggcggagaagaagccgg 106
            |||||||||||||||||||
Sbjct: 1442 aaggcggagaagaagccgg 1424
to top
>gb|BC006626.1| Mus musculus protein phosphatase 2A, regulatory subunit B (PR 53),
           mRNA (cDNA clone MGC:7129 IMAGE:3158086), complete cds
          Length = 2523

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 117 ccccgcagctctccccggc 99
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 70      gcggcatcgatggccccca 88
               |||||||||||||||||||
Sbjct: 4592384 gcggcatcgatggccccca 4592402
to top
>dbj|AK150029.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530122H16 product:Protein
           phosphatase 2A, regulatory subunit B' (PP2A, subunit B',
           PR53 isoform) (Phosphotyrosyl phosphatase activator)
           (PTPA), full insert sequence
          Length = 2568

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 196 ccccgcagctctccccggc 178
to top
>dbj|AK160980.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
          library, clone:4022428E16 product:similar to Protein
          phosphatase 2A, regulatory subunit B' (PP2A, subunit
          B', PR53 isoform) (Phosphotyrosyl phosphatase
          activator) (PTPA) [Mus musculus], full insert sequence
          Length = 3739

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 42 ccccgcagctctccccggc 60
          |||||||||||||||||||
Sbjct: 56 ccccgcagctctccccggc 38
to top
>dbj|AK031591.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030457C15 product:PROTEIN
           PHOSPHATASE 2A, REGULATORY SUBUNIT B' (PP2A, SUBUNIT B',
           PR53 ISOFORM) (PHOSPHOTYROSYL PHOSPHATASE ACTIVATOR)
           (PTPA) homolog [Homo sapiens], full insert sequence
          Length = 2575

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 202 ccccgcagctctccccggc 184
to top
>dbj|AK049184.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330011K21 product:PROTEIN PHOSPHATASE 2A,
           REGULATORY SUBUNIT B' (PP2A, SUBUNIT B', PR53 ISOFORM)
           (PHOSPHOTYROSYL PHOSPHATASE ACTIVATOR) (PTPA) homolog
           [Mus musculus], full insert sequence
          Length = 2566

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 192 ccccgcagctctccccggc 174
to top
>gb|AC118458.2| Homo sapiens chromosome 5 clone CTD-2546F11, complete sequence
          Length = 53025

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 35   cacacacccccgcagctctcccc 57
            |||||||||||||||| ||||||
Sbjct: 7770 cacacacccccgcagccctcccc 7792
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     aaggcggagaagaagccgg 106
              |||||||||||||||||||
Sbjct: 552359 aaggcggagaagaagccgg 552341
to top
>emb|AL954299.13| Mouse DNA sequence from clone RP23-399D3 on chromosome 2, complete
             sequence
          Length = 142229

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    ccccgcagctctccccggc 60
             |||||||||||||||||||
Sbjct: 10450 ccccgcagctctccccggc 10432
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 60     cgaagcagcagcggcatcgatgg 82
              ||||||||||||||| |||||||
Sbjct: 320910 cgaagcagcagcggcgtcgatgg 320888
to top
>gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, complete sequence
          Length = 164783

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 81    ggcccccaaggcggagaagaagc 103
             |||||||| ||||||||||||||
Sbjct: 64994 ggcccccagggcggagaagaagc 65016
to top
>ref|NM_138748.2| Mus musculus protein phosphatase 2A, regulatory subunit B (PR 53)
           (Ppp2r4), mRNA
          Length = 2575

 Score = 38.2 bits (19), Expect = 4.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 42  ccccgcagctctccccggc 60
           |||||||||||||||||||
Sbjct: 202 ccccgcagctctccccggc 184


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 812,816
Number of Sequences: 3902068
Number of extensions: 812816
Number of successful extensions: 74287
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73666
Number of HSP's gapped (non-prelim): 621
length of query: 106
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 85
effective length of database: 17,151,101,840
effective search space: 1457843656400
effective search space used: 1457843656400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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