ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast77b11 |
|---|---|
| Clone Library Name | barley_pub |
>SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)| Length = 1053 Score = 33.5 bits (75), Expect = 0.25 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = -1 Query: 208 GKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGF-GAGTPEPSPQS 68 G P PGPSP N P A GF G+GTPEP ++ Sbjct: 501 GSLPGDLQPGPSPESEGGPTLPGVGPNYNSPRAGGFQGSGTPEPGSET 548
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1840 Score = 31.6 bits (70), Expect = 0.95 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -1 Query: 184 PGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAY 17 P SPG ++ PT+ G+ +P SP S ++S S PTS AY Sbjct: 1539 PSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1594 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -1 Query: 184 PGPSPGRHAATXXXXXXXXSNP---PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAY 17 PG SP A + ++P PT+ + +P SP S S+S + S PTS AY Sbjct: 1585 PGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1643 Score = 29.6 bits (65), Expect = 3.6 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = -1 Query: 238 TSSESTVSCSGKAPEGAIPGPS-PGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 62 TS + + G +P PS PG + S PT+ + +P SP S S Sbjct: 1562 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621 Query: 61 FSRSYGSVLPTSLAY 17 +S + S PTS +Y Sbjct: 1622 YSPTSPSYSPTSPSY 1636 Score = 28.9 bits (63), Expect = 6.2 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -1 Query: 238 TSSESTVSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 62 TS + S G +P P SP + S PT+ + +P SP S S Sbjct: 1576 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635 Query: 61 FSRSYGSVLPTSLAY 17 +S + + PTS AY Sbjct: 1636 YSPTSPAYSPTSPAY 1650
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 31.6 bits (70), Expect = 0.95 Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 1/83 (1%) Frame = +1 Query: 4 PMEQCRQGKSAKRIRNFGKRIGSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDR 183 P + +G S+ + G GS +W G RP+ C +R E+ A G D Sbjct: 523 PRARSEEGASSDSSASTGSHEGSSEW--GGRPQ------GCPGKARAETSQQEASEGGDP 574 Query: 184 ESPLRELSPSMKQSTQ-NWYGQG 249 SP LS Q GQG Sbjct: 575 ASPALSLSSLRSDDLQAETQGQG 597
>KPC1_COCHE (O42632) Protein kinase C-like (EC 2.7.11.13)| Length = 1174 Score = 31.2 bits (69), Expect = 1.2 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 2/77 (2%) Frame = -1 Query: 253 IPLVRTSSESTVSCSGKAPEGAIPGPSP--GRHAATXXXXXXXXSNPPTADGFGAGTPEP 80 + R S +T + S AP G P G + N T G+G + Sbjct: 666 VDAARASYSTTGTASTGAPTSPTSGSRPPSGPRTQSSVAAAAAAMNKATQPGYGRSNTDY 725 Query: 79 SPQSQSFSRSYGSVLPT 29 SPQS RS GS PT Sbjct: 726 SPQS---GRSSGSGYPT 739
>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2| Length = 957 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -3 Query: 212 LGESSRRGDSRSVPRPARGDPLSPREQLEQSANSRRVRGRDPRAQ 78 + +S +R VPRPAR P++P + E+S+ ++ R RD R + Sbjct: 310 VSQSLQRPPKPKVPRPAR--PVTPAAKTEKSSEKKQSRHRDRRPE 352
>CAAL_BORPE (Q7VS51) Carboxylate-amine ligase BP0598 (EC 6.3.-.-)| Length = 413 Score = 25.4 bits (54), Expect(2) = 1.4 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +2 Query: 362 RVNGGSNTPP--IRRRLRASSSLKVGACESS 448 R G +TPP +RRR+RA+S G C S Sbjct: 368 RGQGVQDTPPSAVRRRIRATSEPVGGVCALS 398 Score = 24.3 bits (51), Expect(2) = 1.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 Query: 193 LRELSPSMKQSTQNWYGQGESD 258 +REL ++ QNW GQG D Sbjct: 353 VRELPLVVESMAQNWRGQGVQD 374
>CAAL_BORPA (Q7W1R5) Carboxylate-amine ligase BPP0286 (EC 6.3.-.-)| Length = 413 Score = 25.4 bits (54), Expect(2) = 1.4 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +2 Query: 362 RVNGGSNTPP--IRRRLRASSSLKVGACESS 448 R G +TPP +RRR+RA+S G C S Sbjct: 368 RGQGVQDTPPSAVRRRIRATSEPVGGVCALS 398 Score = 24.3 bits (51), Expect(2) = 1.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 Query: 193 LRELSPSMKQSTQNWYGQGESD 258 +REL ++ QNW GQG D Sbjct: 353 VRELPLVVESMAQNWRGQGVQD 374
>CAAL_BORBR (Q7WQP1) Carboxylate-amine ligase BB0289 (EC 6.3.-.-)| Length = 413 Score = 25.4 bits (54), Expect(2) = 1.4 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +2 Query: 362 RVNGGSNTPP--IRRRLRASSSLKVGACESS 448 R G +TPP +RRR+RA+S G C S Sbjct: 368 RGQGVQDTPPSAVRRRIRATSEPVGGVCALS 398 Score = 24.3 bits (51), Expect(2) = 1.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +1 Query: 193 LRELSPSMKQSTQNWYGQGESD 258 +REL ++ QNW GQG D Sbjct: 353 VRELPLVVESMAQNWRGQGVQD 374
>FOXQ1_MOUSE (O70220) Forkhead box protein Q1 (Hepatocyte nuclear factor 3| forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (HFH-1l) Length = 400 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/65 (33%), Positives = 27/65 (41%) Frame = -1 Query: 241 RTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 62 R S +TVS SG PE A PGP+ AA +P A E S + Sbjct: 211 RLSHRTTVSASGLRPEEAPPGPAGTPQAAPAARSSPIARSP-------ARQEERSSPASK 263 Query: 61 FSRSY 47 FS S+ Sbjct: 264 FSSSF 268
>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) (B220) Length = 1733 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -1 Query: 118 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAY 17 PT+ GFG +P SP S ++S + + PTS +Y Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSY 1563 Score = 29.3 bits (64), Expect = 4.7 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -1 Query: 238 TSSESTVSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQS 62 TS VS G +P P SP + S PT+ + +P SP S S Sbjct: 1531 TSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1590 Query: 61 FSRSYGSVLPTSLAY 17 +S + S PTS +Y Sbjct: 1591 YSPTSPSYSPTSPSY 1605 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = -1 Query: 208 GKAPEGAIPG---PSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSV 38 G+AP PG SPG + + PT+ + +P SP S S+S + S Sbjct: 1527 GEAPTS--PGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1584 Query: 37 LPTSLAY 17 PTS +Y Sbjct: 1585 SPTSPSY 1591
>MSH6_SCHPO (O74502) DNA mismatch repair protein msh6| Length = 1254 Score = 30.4 bits (67), Expect = 2.1 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -1 Query: 232 SESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSR 53 + S V+ + +PE +P SP HA T PP++D F SP S S R Sbjct: 62 NSSNVNKNSSSPERELP-TSPSHHANTEIDSSSSMLPPPSSDPFS------SPLSSSLHR 114 Query: 52 S 50 S Sbjct: 115 S 115
>TESK1_HUMAN (Q15569) Dual specificity testis-specific protein kinase 1 (EC| 2.7.12.1) (Testicular protein kinase 1) Length = 626 Score = 30.4 bits (67), Expect = 2.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 250 PLVRTSSESTVSCSGKAPEGAIPGPSP 170 P V S+E + C G +PE PGP+P Sbjct: 458 PAVGPSAEEKMECEGSSPEPEPPGPAP 484
>ASH2L_MOUSE (Q91X20) Set1/Ash2 histone methyltransferase complex subunit ASH2| (ASH2-like protein) Length = 623 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Frame = +3 Query: 75 GLGSGVPA-PNPSAVGGXXXXXXXXXXVAACRPGDGPGIAPSGAFP---EHETVDSELVR 242 G G GV A P P A A G+GP AP GA P E E+ D+ LV Sbjct: 7 GPGPGVSAGPGPGAAASATTAEDRETEPVAAGAGEGPSAAP-GAEPSSGEAESGDANLVD 65 Query: 243 TRGI 254 G+ Sbjct: 66 VSGL 69
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -1 Query: 226 STVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNP--PTADGFGAGTPEPSP 74 +TV+ +G GA P P+PG AAT P T D G P P P Sbjct: 384 TTVTMTGN---GARPPPAPGAEAATPGSAQATSLPPSSTTVDSSTEGAPPPGP 433
>ADCY9_XENLA (P98999) Adenylate cyclase type 9 (EC 4.6.1.1) (Adenylate cyclase| type IX) (ATP pyrophosphate-lyase 9) (Adenylyl cyclase 9) (xlAC) Length = 1305 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 97 PRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQSTQNWY 240 P R + SSCS GESG + G G+ ++L ++ST NW+ Sbjct: 38 PSRRCKYSISSSCSSGESGVKKTG-GSGGARRQKKLPQLFERSTSNWW 84
>VE2_HPV08 (P06422) Regulatory protein E2| Length = 498 Score = 29.3 bits (64), Expect = 4.7 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Frame = +1 Query: 22 QGKSAKRIRNFGK----RIGSEDWARGSRPRTR---RLLADCSSCSRGESGSPRAGRGTD 180 + +S R+R G R S + RPR+R R A +S R GSPR R T Sbjct: 274 RSRSLSRVRAVGSTTVSRSRSSSLTKAVRPRSRSRSRGRATATSRRRAGRGSPRRRRSTS 333 Query: 181 RESPLRELSPSMKQSTQNWYGQG 249 R S + + G+G Sbjct: 334 RSPSTNTFKRSQRGGGRRGRGRG 356
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 29.3 bits (64), Expect = 4.7 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = -1 Query: 184 PGPSPGRHAATXXXXXXXXSNPPTA---DGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYI 14 PGP+PG +A + PPT+ G G G P P+P S G+ PT + Sbjct: 115 PGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG-PTPTPPPAVTSAPPGAPPPTPPSSG 173 Query: 13 VP 8 VP Sbjct: 174 VP 175
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 29.3 bits (64), Expect = 4.7 Identities = 18/65 (27%), Positives = 29/65 (44%) Frame = -1 Query: 211 SGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYGSVLP 32 S +P + P+ G+ + S PT+ + +P SP S S+S + S P Sbjct: 1590 SPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649 Query: 31 TSLAY 17 TS +Y Sbjct: 1650 TSPSY 1654
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -1 Query: 217 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 41 S G P+ P+ ++ T N PT+ + +P SP S S+S + S Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663 Query: 40 VLPTSLAY 17 PTS +Y Sbjct: 1664 YSPTSPSY 1671
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -1 Query: 217 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 41 S G P+ P+ ++ T N PT+ + +P SP S S+S + S Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663 Query: 40 VLPTSLAY 17 PTS +Y Sbjct: 1664 YSPTSPSY 1671
>DCP2_ASHGO (Q75BK1) mRNA decapping enzyme 2 (EC 3.-.-.-)| Length = 880 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/60 (35%), Positives = 23/60 (38%) Frame = -1 Query: 250 PLVRTSSESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 71 PLV + ES S S AP P PS + P A G AG P P PQ Sbjct: 287 PLVFSDDESQASISTSAPTTVPPAPSTANSQSV----------QPIAAGAYAGYPFPFPQ 336
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -1 Query: 217 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSN-PPTADGFGAGTPEPSPQSQSFSRSYGS 41 S G P+ P+ ++ T N PT+ + +P SP S S+S + S Sbjct: 101 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 160 Query: 40 VLPTSLAY 17 PTS +Y Sbjct: 161 YSPTSPSY 168
>ORC4_SCHPO (Q9Y794) Origin recognition complex subunit 4| Length = 972 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +1 Query: 67 GSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMKQST 228 GSE + R R ++ + S + P+ GRG R PL + PS+ + T Sbjct: 117 GSEPIIKRKRGRPPKIKSSSPSTKLDDPLKPKRGRGRPRLHPLPVVQPSVDEGT 170
>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1752 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 118 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAY 17 PT+ + A +P SP S S+S + S PTS +Y Sbjct: 1601 PTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSY 1634
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 28.5 bits (62), Expect = 8.1 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = -1 Query: 199 PEGAIPGPSPGRHAATXXXXXXXXS-----NPPTADGFGAGTPEPSPQSQSFSRSYGSVL 35 PE P P+PG AAT S PP A A P+P+PQ + S GS Sbjct: 29 PEPQQPPPAPGPGAATASAATSAASPGPERRPPPAQ---APAPQPAPQPAP-TPSVGSSF 84 Query: 34 PTSLAYIV 11 +SL+ V Sbjct: 85 FSSLSQAV 92
>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1599 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 118 PTADGFGAGTPEPSPQSQSFSRSYGSVLPTSLAYIVPLA 2 PT+ + +P SP S S+S + S PTS +Y V ++ Sbjct: 1538 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576
>MEI9_DROME (Q24087) Protein mei-9 (Protein meiotic 9)| Length = 961 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 137 EQLEQSANSRRVRGRDPRAQSSEPILFPKLRIRFADFPCL 18 E +++A SR+ G+ P+A P + +R +D PCL Sbjct: 673 EPTDENAKSRQAGGQAPQATKETPKVIVDMREFRSDLPCL 712
>DTX1_XENLA (Q8AW93) Protein deltex-1 (xDtx1)| Length = 623 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/33 (30%), Positives = 15/33 (45%) Frame = +2 Query: 8 WNNVGKGSRQNGSVTSGKGLALRTGLGGPGPEP 106 W G+G R G + +G G + + G P P Sbjct: 259 WGRTGEGMRSTGGIRNGSGFSRSQSVPGAAPYP 291
>ATPBM_ARATH (P83483) ATP synthase beta chain 1, mitochondrial precursor (EC| 3.6.3.14) Length = 556 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -1 Query: 247 LVRTSS-ESTVSCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQ 71 L+R+SS S + P +P PSP RHAA + T+ + P +P Sbjct: 10 LLRSSSGRSAAKLGNRNPR--LPSPSPARHAAPCSYLLGRVAEYATSSPASSAAPSSAPA 67 Query: 70 SQSFSRSY 47 ++Y Sbjct: 68 KDEGKKTY 75
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 28.5 bits (62), Expect = 8.1 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = -1 Query: 220 VSCSGKAPEGAIPGP-SPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSFSRSYG 44 VS G +P P SP + S PT+ + +P SP S S+S + Sbjct: 1540 VSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1599 Query: 43 SVLPTSLAY 17 S PTS +Y Sbjct: 1600 SYSPTSPSY 1608
>PRA_MYCLE (P41484) Proline-rich antigen (36 kDa antigen)| Length = 249 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/76 (28%), Positives = 26/76 (34%), Gaps = 6/76 (7%) Frame = -1 Query: 217 SCSGKAPEGAIPGPSPGRHAATXXXXXXXXSNPPTADGFGAGTPEPSPQSQSF------S 56 S S P PG S G + PPTA G P P P S+ Sbjct: 8 SGSNPTPAPPPPGSSGGYEPSFAPSELGSAYPPPTAPPVGGSYPPPPPPGGSYPPPPPPG 67 Query: 55 RSYGSVLPTSLAYIVP 8 SY P++ AY P Sbjct: 68 GSYPPPPPSTGAYAPP 83
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 28.5 bits (62), Expect = 8.1 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = +1 Query: 55 GKRIGSEDWARGSRPRTRRLLADCSSCSRGESGSPRAGRGTDRESPLRELSPSMK 219 G GS+ R R SS SR SGSPR+ R ES +LS S + Sbjct: 28 GSAPGSQRSRRSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSGSAR 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,735,307 Number of Sequences: 219361 Number of extensions: 1422488 Number of successful extensions: 5472 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4745 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5419 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
