ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast77b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARCA_BURPS (Q63U73) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 33 0.24
2ARCA_BURMA (Q62KD9) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 33 0.24
3ARCA_BRAJA (Q89DX7) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 30 2.0
4ARCA_RHILO (Q988I1) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 30 2.0
5ARCA2_RHIME (Q92YG5) Arginine deiminase 2 (EC 3.5.3.6) (ADI 2) (... 30 2.7
6ARCA_PSEAE (P13981) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 30 2.7
7GLGB_PSESM (Q881X0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 29 5.9
8ARCA_PSEPK (Q88P52) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 28 7.7
9CASQ1_CHICK (P19204) Calsequestrin-1 precursor (Calsequestrin, s... 28 7.7
10ARCA_PSEPU (P41142) Arginine deiminase (EC 3.5.3.6) (ADI) (Argin... 28 7.7

>ARCA_BURPS (Q63U73) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 418

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 239 VRAGLRDLPGSRFFESWDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTLGT 397
           V  G  D    R  E WDDG +  C   GVV   D +  +  LLR   V V+T+G+
Sbjct: 341 VETGGNDFAAER--EQWDDGNNMVCIEPGVVVGYDRNTYTNTLLRKAGVEVITIGS 394



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>ARCA_BURMA (Q62KD9) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 418

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 239 VRAGLRDLPGSRFFESWDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTLGT 397
           V  G  D    R  E WDDG +  C   GVV   D +  +  LLR   V V+T+G+
Sbjct: 341 VETGGNDFAAER--EQWDDGNNMVCIEPGVVVGYDRNTYTNTLLRKAGVEVITIGS 394



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>ARCA_BRAJA (Q89DX7) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 420

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +2

Query: 287 WDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTL 391
           WD GA+  CA  GVV A D +  +  LLR   + V+T+
Sbjct: 357 WDSGANLVCASPGVVFAYDRNTYTNTLLRKEGIEVITI 394



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>ARCA_RHILO (Q988I1) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 412

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +2

Query: 287 WDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTL 391
           WD GA+  CA  GVV A D +  +  LLR   + V+T+
Sbjct: 349 WDSGANLVCASPGVVYAYDRNTYTNTLLRKEGIEVITI 386



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>ARCA2_RHIME (Q92YG5) Arginine deiminase 2 (EC 3.5.3.6) (ADI 2) (Arginine|
           dihydrolase 2) (AD 2)
          Length = 419

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 287 WDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTLGTGLSDSPGLAG 427
           WD GA+  C   GVV A D +  +  LLR   V V+T+ TG     G  G
Sbjct: 356 WDSGANLVCLSPGVVLAYDRNTYTNTLLRKAGVEVITI-TGAELGRGRGG 404



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>ARCA_PSEAE (P13981) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 417

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 281 ESWDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTL 391
           E WDDG +  C   GVV   D +  +  LLR   V V+T+
Sbjct: 352 EQWDDGNNVVCLEPGVVVGYDRNTYTNTLLRKAGVEVITI 391



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>GLGB_PSESM (Q881X0) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 741

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 70  SGCWEMDSTATGEWSEANWR 11
           +G W+M+    G+W + NWR
Sbjct: 262 AGSWQMEQNDEGQWRQYNWR 281



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>ARCA_PSEPK (Q88P52) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 417

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 281 ESWDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTLGTG 400
           E WDDG +      GVV   D +  +  LLR   + V+T+  G
Sbjct: 352 EQWDDGNNVVAIEPGVVIGYDRNTYTNTLLRKAGIEVITISAG 394



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>CASQ1_CHICK (P19204) Calsequestrin-1 precursor (Calsequestrin, skeletal muscle|
           isoform) (Aspartactin) (Laminin-binding protein)
          Length = 406

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +2

Query: 242 RAGLRDLPGSRFFESWDDGASAPCAYAGVVCAPDEDDPSGALLRVSVLTLGTGLSDSPGL 421
           RA LR L     FE+W+D          +V   +EDDP G      +  +    +D+P L
Sbjct: 246 RATLRKLRPEDMFETWEDDMEG----IHIVAFAEEDDPDGFEFLEILKQVARDNTDNPDL 301

Query: 422 A 424
           +
Sbjct: 302 S 302



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>ARCA_PSEPU (P41142) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 420

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 281 ESWDDGASAPCAYAGVVCAPDEDDPSGALLR---VSVLTLGTG 400
           E WDDG +      GVV   D +  +  LLR   + V+T+  G
Sbjct: 355 EQWDDGNNVVALEPGVVIGYDRNTYTNTLLRKAGIEVITISAG 397


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.122    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,358,350
Number of Sequences: 219361
Number of extensions: 480608
Number of successful extensions: 1663
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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