>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4|
           (Z-protein)
          Length = 238

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/154 (22%), Positives = 56/154 (36%)
 Frame = +2

Query: 5   ILCAQXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYIYQHRHPHNLAI 184
           IL  Q            +   L   +  SP            L+  L +++H HP NL +
Sbjct: 41  ILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLHRHTHPLNLYL 100

Query: 185 LGLFTLCLSFSIGVACANTEGTIXXXXXXXXXXXXXXXXXYTFWASKKGKEFSYLGPFLF 364
           L  FTL  S ++       +  +                 YT    +  ++F+  G  LF
Sbjct: 101 LFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTL---QSKRDFTKFGAGLF 157

Query: 365 SALTILVVISXTQIFFPFGPASNAVIGGFGALVF 466
           + L IL +    ++FF +      V+   GAL+F
Sbjct: 158 AGLWILCLAGFLKLFF-YSETMELVLASLGALLF 190

>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4|
           (Z-protein) (S1R protein)
          Length = 238

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 35/154 (22%), Positives = 57/154 (37%)
 Frame = +2

Query: 5   ILCAQXXXXXXXXXXXXFHPTLNATLSNSPXXXXXXXXXPFILMIPLYIYQHRHPHNLAI 184
           IL  Q            +  ++   +  SP            L+  L + +H++P NL +
Sbjct: 41  ILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALTLNRHKYPLNLYL 100

Query: 185 LGLFTLCLSFSIGVACANTEGTIXXXXXXXXXXXXXXXXXYTFWASKKGKEFSYLGPFLF 364
           L  FTL  + ++ V     +  I                 YT    +  K+FS  G  LF
Sbjct: 101 LFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTL---QSKKDFSKFGAGLF 157

Query: 365 SALTILVVISXTQIFFPFGPASNAVIGGFGALVF 466
           + L IL +    + FF +      V+   GAL+F
Sbjct: 158 ALLWILCLSGFLKFFF-YSEIMELVLAAAGALLF 190

>Y236_CAMJE (Q9PIQ8) Hypothetical protein Cj0236c|
          Length = 231

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 5/118 (4%)
 Frame = +2

Query: 131 LMIPLYIYQHRHPHNLAILGLFTLCLSFS-----IGVACANTEGTIXXXXXXXXXXXXXX 295
           L+  L   +   P NL +L  FT C   +     I V      G I              
Sbjct: 72  LLFALQWKKREAPLNLVLLFGFTFCSGLTLTPLLISVLALPAGGIIIAQAFALTTVAFAG 131

Query: 296 XXXYTFWASKKGKEFSYLGPFLFSALTILVVISXTQIFFPFGPASNAVIGGFGALVFS 469
              +   A    K+F+ +G  LF  L ++V  S   +FF      N  I    A++FS
Sbjct: 132 LSVF---AMNTKKDFTVMGKALFIVLIVIVAASLLNLFFQ-SSIVNLAISAVAAILFS 185

>Y1358_VIBCH (Q9KSA1) Hypothetical protein VC1358|
          Length = 223

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 332 KEFSYLGPFLFSALTILVVISXTQIFFPFGPASNAVIGGFGALVFS 469
           K+FS++  FLF+ L I++V +   IF      ++  I    ALVFS
Sbjct: 132 KDFSFMRNFLFAGLIIVIVAALINIFVG-STVAHLAISSVSALVFS 176

>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 765

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 24/84 (28%), Positives = 31/84 (36%)
 Frame = -1

Query: 467 RTPELQTRRSQHSMQVQMGRRSGXSLLRPG**EQKTEMVQGN*IPCPSLKPRMCTQSERQ 288
           R P LQT  S  S  V    R+  S L+    +Q +    G         PR  + S R 
Sbjct: 620 RNPALQTSLSSLSSSVSRAPRTSSSSLQA---DQASSNAPG---------PRPSSGSHRS 667

Query: 287 PQLRSVPKPEAQWFLQCLHKPHQC 216
           P  + +P P     L  L  P  C
Sbjct: 668 PARQGLPSPPGTPHLTILRGPQSC 691

>MA2B1_FELCA (O46432) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)|
           (Mannosidase, alpha B) (Lysosomal acid
           alpha-mannosidase) (Laman) (Mannosidase alpha class 2B
           member 1)
          Length = 1007

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = +1

Query: 82  LQLARPGARAR----CPPLHPDDPIVHLSA 159
           L LA PGARA     CP +HPD   VHL A
Sbjct: 41  LLLAAPGARAAGYETCPMVHPDMLNVHLVA 70

>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1|
           precursor (Down syndrome cell adhesion molecule 2)
          Length = 2053

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = -2

Query: 265 SLKHNGSFSVCTSHTNAEAQAQSEQTQDSKIVRVPVLIDVQWDHQD 128
           SLKHNG+++   S  NA A    E+     IVRVP    VQ ++QD
Sbjct: 660 SLKHNGNYTCIAS--NAAATVSRER---QLIVRVPPRFVVQPNNQD 700

>PININ_CANFA (P79149) Pinin|
          Length = 773

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 335 PCPSLKPRMCTQSERQPQLRSVPKPEAQ 252
           P P L+P++  Q + QPQ +S P+P+ Q
Sbjct: 500 PEPQLQPQLQLQLQPQPQSQSQPQPQLQ 527

>US14_HCMVA (P09719) Hypothetical protein HVLF4|
          Length = 310

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +2

Query: 59  HPTLNATLSNSPXXXXXXXXXPFILMIPLYIYQHRHPHNLAILGLFTLCLSFS 217
           +P+L    S+ P         P +++  L +  HRHP N  +  L+   LSF+
Sbjct: 90  YPSLGYKCSDDPSPLLLSCT-PVLVLGALELTDHRHPSNGLVFALYVALLSFT 141

>LYTB_STRR6 (P59206) Putative endo-beta-N-acetylglucosaminidase precursor (EC|
           3.2.1.96) (Murein hydrolase)
          Length = 702

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 424 RSKWEEDLGXAYY-DQDSESRKQKW 353
           +S+W ED G  YY DQD + ++  W
Sbjct: 86  KSEWVEDKGAFYYLDQDGKMKRNAW 110

>UFO1_YEAST (Q04511) Ubiquitin ligase complex F-box protein UFO1|
          Length = 668

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = -2

Query: 454 SKPADHSIRCRS----KWEEDLGXA--YYDQDSESRKQKWSKVTKFL 332
           SK   HS + ++    KW E L     YYD+D + R+++ S++++ +
Sbjct: 455 SKKHHHSTKGKNTVSNKWNETLNTELQYYDEDEDLRRKRQSEISRLI 501

>LYTB_STRPN (P59205) Putative endo-beta-N-acetylglucosaminidase precursor (EC|
           3.2.1.96) (Murein hydrolase)
          Length = 658

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 424 RSKWEEDLGXAYY-DQDSESRKQKW 353
           +S+W ED G  YY DQD + ++  W
Sbjct: 86  KSEWVEDKGAFYYLDQDGKMKRNAW 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,457,472
Number of Sequences: 219361
Number of extensions: 1207481
Number of successful extensions: 3263
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)