ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast77b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 402 bits (203), Expect = e-109 Identities = 379/437 (86%), Gaps = 3/437 (0%) Strand = Plus / Minus Query: 41 catggcttcccctaagcttctcctcctgctcgccaccttcctcccgagctgcggcctcct 100 ||||||||| | ||||| || |||||| ||||||||| |||| |||||||||| || | Sbjct: 36024097 catggcttctgccaagctgcttctcctggtcgccacctcgctcctgagctgcggcgtcat 36024038 Query: 101 cctggcggacttcgccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctg 160 ||| || |||| ||| |||||||| |||||| |||||||||||||||| |||||||| || Sbjct: 36024037 cctcgccgactacgcgccgatgacgctgaccatcgtgaacaactgcccatacccggtgtg 36023978 Query: 161 gccgggcatccaggggagcgccggcagcgaggtcctggaggggggcggcttctacctccc 220 ||| || ||||||| | | ||||| ||| ||||| ||||| |||||||||| |||||| Sbjct: 36023977 gccaggaatccaggccaactccggccacgacgtcctcgagggcggcggcttcttcctccc 36023918 Query: 221 gtcgctctcccaccgctccttcccggcgcccgcccacgcctggtccggccgcatctgggc 280 | |||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||| Sbjct: 36023917 ggcgctctcccaccgctccttcgccgcgccggcccacccttggtccggccgcatctgggc 36023858 Query: 281 gcgcaccggctgcacgcccgccggcggggagcagctccgctgcgccacgggcgactgcgg 340 |||||| |||||||| |||||||| | ||||||| ||||||||||||||||||||| Sbjct: 36023857 gcgcacgggctgcactggcgccggcgcg---cagctccactgcgccacgggcgactgcgg 36023801 Query: 341 cggccggctccagtgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctc 400 ||| ||||||||||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 36023800 cgggcggctccagtgcgcgggcctcggcggcgcggcgcccgcgacgctggcgcaggtctc 36023741 Query: 401 cctccaccacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgt 460 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 36023740 cctccaccacggcaacgaccagacctcctacggcgtgagcgtggtggacggcttcaacgt 36023681 Query: 461 gggcctgtccgtgaccc 477 || ||||| ||||||| Sbjct: 36023680 cgggctgtcggtgaccc 36023664
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 402 bits (203), Expect = e-109 Identities = 379/437 (86%), Gaps = 3/437 (0%) Strand = Plus / Minus Query: 41 catggcttcccctaagcttctcctcctgctcgccaccttcctcccgagctgcggcctcct 100 ||||||||| | ||||| || |||||| ||||||||| |||| |||||||||| || | Sbjct: 36822 catggcttctgccaagctgcttctcctggtcgccacctcgctcctgagctgcggcgtcat 36763 Query: 101 cctggcggacttcgccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctg 160 ||| || |||| ||| |||||||| |||||| |||||||||||||||| |||||||| || Sbjct: 36762 cctcgccgactacgcgccgatgacgctgaccatcgtgaacaactgcccatacccggtgtg 36703 Query: 161 gccgggcatccaggggagcgccggcagcgaggtcctggaggggggcggcttctacctccc 220 ||| || ||||||| | | ||||| ||| ||||| ||||| |||||||||| |||||| Sbjct: 36702 gccaggaatccaggccaactccggccacgacgtcctcgagggcggcggcttcttcctccc 36643 Query: 221 gtcgctctcccaccgctccttcccggcgcccgcccacgcctggtccggccgcatctgggc 280 | |||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||| Sbjct: 36642 ggcgctctcccaccgctccttcgccgcgccggcccacccttggtccggccgcatctgggc 36583 Query: 281 gcgcaccggctgcacgcccgccggcggggagcagctccgctgcgccacgggcgactgcgg 340 |||||| |||||||| |||||||| | ||||||| ||||||||||||||||||||| Sbjct: 36582 gcgcacgggctgcactggcgccggcgcg---cagctccactgcgccacgggcgactgcgg 36526 Query: 341 cggccggctccagtgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctc 400 ||| ||||||||||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 36525 cgggcggctccagtgcgcgggcctcggcggcgcggcgcccgcgacgctggcgcaggtctc 36466 Query: 401 cctccaccacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgt 460 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 36465 cctccaccacggcaacgaccagacctcctacggcgtgagcgtggtggacggcttcaacgt 36406 Query: 461 gggcctgtccgtgaccc 477 || ||||| ||||||| Sbjct: 36405 cgggctgtcggtgaccc 36389
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 402 bits (203), Expect = e-109 Identities = 379/437 (86%), Gaps = 3/437 (0%) Strand = Plus / Minus Query: 41 catggcttcccctaagcttctcctcctgctcgccaccttcctcccgagctgcggcctcct 100 ||||||||| | ||||| || |||||| ||||||||| |||| |||||||||| || | Sbjct: 122775 catggcttctgccaagctgcttctcctggtcgccacctcgctcctgagctgcggcgtcat 122716 Query: 101 cctggcggacttcgccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctg 160 ||| || |||| ||| |||||||| |||||| |||||||||||||||| |||||||| || Sbjct: 122715 cctcgccgactacgcgccgatgacgctgaccatcgtgaacaactgcccatacccggtgtg 122656 Query: 161 gccgggcatccaggggagcgccggcagcgaggtcctggaggggggcggcttctacctccc 220 ||| || ||||||| | | ||||| ||| ||||| ||||| |||||||||| |||||| Sbjct: 122655 gccaggaatccaggccaactccggccacgacgtcctcgagggcggcggcttcttcctccc 122596 Query: 221 gtcgctctcccaccgctccttcccggcgcccgcccacgcctggtccggccgcatctgggc 280 | |||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||| Sbjct: 122595 ggcgctctcccaccgctccttcgccgcgccggcccacccttggtccggccgcatctgggc 122536 Query: 281 gcgcaccggctgcacgcccgccggcggggagcagctccgctgcgccacgggcgactgcgg 340 |||||| |||||||| |||||||| | ||||||| ||||||||||||||||||||| Sbjct: 122535 gcgcacgggctgcactggcgccggcgcg---cagctccactgcgccacgggcgactgcgg 122479 Query: 341 cggccggctccagtgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctc 400 ||| ||||||||||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 122478 cgggcggctccagtgcgcgggcctcggcggcgcggcgcccgcgacgctggcgcaggtctc 122419 Query: 401 cctccaccacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgt 460 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 122418 cctccaccacggcaacgaccagacctcctacggcgtgagcgtggtggacggcttcaacgt 122359 Query: 461 gggcctgtccgtgaccc 477 || ||||| ||||||| Sbjct: 122358 cgggctgtcggtgaccc 122342
>dbj|AK060655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A02, full insert sequence Length = 1001 Score = 402 bits (203), Expect = e-109 Identities = 379/437 (86%), Gaps = 3/437 (0%) Strand = Plus / Plus Query: 41 catggcttcccctaagcttctcctcctgctcgccaccttcctcccgagctgcggcctcct 100 ||||||||| | ||||| || |||||| ||||||||| |||| |||||||||| || | Sbjct: 58 catggcttctgccaagctgcttctcctggtcgccacctcgctcctgagctgcggcgtcat 117 Query: 101 cctggcggacttcgccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctg 160 ||| || |||| ||| |||||||| |||||| |||||||||||||||| |||||||| || Sbjct: 118 cctcgccgactacgcgccgatgacgctgaccatcgtgaacaactgcccatacccggtgtg 177 Query: 161 gccgggcatccaggggagcgccggcagcgaggtcctggaggggggcggcttctacctccc 220 ||| || ||||||| | | ||||| ||| ||||| ||||| |||||||||| |||||| Sbjct: 178 gccaggaatccaggccaactccggccacgacgtcctcgagggcggcggcttcttcctccc 237 Query: 221 gtcgctctcccaccgctccttcccggcgcccgcccacgcctggtccggccgcatctgggc 280 | |||||||||||||||||||| | ||||| |||||| | |||||||||||||||||||| Sbjct: 238 ggcgctctcccaccgctccttcgccgcgccggcccacccttggtccggccgcatctgggc 297 Query: 281 gcgcaccggctgcacgcccgccggcggggagcagctccgctgcgccacgggcgactgcgg 340 |||||| |||||||| |||||||| | ||||||| ||||||||||||||||||||| Sbjct: 298 gcgcacgggctgcactggcgccggcgcg---cagctccactgcgccacgggcgactgcgg 354 Query: 341 cggccggctccagtgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctc 400 ||| ||||||||||||| |||||||||||||||||||||||| || || ||||| ||||| Sbjct: 355 cgggcggctccagtgcgcgggcctcggcggcgcggcgcccgcgacgctggcgcaggtctc 414 Query: 401 cctccaccacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgt 460 ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 415 cctccaccacggcaacgaccagacctcctacggcgtgagcgtggtggacggcttcaacgt 474 Query: 461 gggcctgtccgtgaccc 477 || ||||| ||||||| Sbjct: 475 cgggctgtcggtgaccc 491
>ref|NM_190525.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 400 bits (202), Expect = e-108 Identities = 369/424 (87%), Gaps = 3/424 (0%) Strand = Plus / Plus Query: 54 aagcttctcctcctgctcgccaccttcctcccgagctgcggcctcctcctggcggacttc 113 ||||| || |||||| ||||||||| |||| |||||||||| || |||| || |||| | Sbjct: 13 aagctgcttctcctggtcgccacctcgctcctgagctgcggcgtcatcctcgccgactac 72 Query: 114 gccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctggccgggcatccag 173 || |||||||| |||||| |||||||||||||||| |||||||| ||||| || |||||| Sbjct: 73 gcgccgatgacgctgaccatcgtgaacaactgcccatacccggtgtggccaggaatccag 132 Query: 174 gggagcgccggcagcgaggtcctggaggggggcggcttctacctcccgtcgctctcccac 233 | | | ||||| ||| ||||| ||||| |||||||||| ||||||| ||||||||||| Sbjct: 133 gccaactccggccacgacgtcctcgagggcggcggcttcttcctcccggcgctctcccac 192 Query: 234 cgctccttcccggcgcccgcccacgcctggtccggccgcatctgggcgcgcaccggctgc 293 ||||||||| | ||||| |||||| | |||||||||||||||||||||||||| |||||| Sbjct: 193 cgctccttcgccgcgccggcccacccttggtccggccgcatctgggcgcgcacgggctgc 252 Query: 294 acgcccgccggcggggagcagctccgctgcgccacgggcgactgcggcggccggctccag 353 || |||||||| | ||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 253 actggcgccggcgcg---cagctccactgcgccacgggcgactgcggcgggcggctccag 309 Query: 354 tgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctccctccaccacggc 413 |||| |||||||||||||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 310 tgcgcgggcctcggcggcgcggcgcccgcgacgctggcgcaggtctccctccaccacggc 369 Query: 414 aatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgtgggcctgtccgtg 473 || |||||| | ||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 370 aacgaccagacctcctacggcgtgagcgtggtggacggcttcaacgtcgggctgtcggtg 429 Query: 474 accc 477 |||| Sbjct: 430 accc 433
>gb|BT017223.1| Zea mays clone EL01N0373E03.c mRNA sequence Length = 1010 Score = 381 bits (192), Expect = e-102 Identities = 326/370 (88%), Gaps = 3/370 (0%) Strand = Plus / Plus Query: 108 gacttcgccccgatgaccctgaccgtcgtgaacaactgcccgtacccggtctggccgggc 167 |||| |||||| |||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 21 gactacgccccaatgaccctgaccgtggtgaacaactgcccctacccggtgtggccgggc 80 Query: 168 atccaggggagcgccggcagcgaggtcctggaggggggcggcttctacctcccgtcgctc 227 ||||||| | | |||| ||| ||||||||||| |||||||||| ||||||| ||||| Sbjct: 81 atccaggccaactccgggcacgacgtcctggagggcggcggcttcttcctcccgccgctc 140 Query: 228 tcccaccgctccttcccggcgcccgcccacgcctggtccggccgcatctgggcgcgcacc 287 |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 141 tcccacaagtccttcccggcgccggcccacccctggtccggccgcatctgggcgcgcacg 200 Query: 288 ggctgcacgcccgccggcggggagcagctccgctgcgccacgggcgactgcggcggccgg 347 |||||| || |||||||| | ||||||| |||||||||||||||||||||||| ||| Sbjct: 201 ggctgcgcgggcgccggcgcg---cagctccactgcgccacgggcgactgcggcgggcgg 257 Query: 348 ctccagtgcgggggcctcggcggcgcggcgcccgccaccctcgcgcaagtctccctccac 407 ||||||||||| || |||||||||||||||||||| || || ||||| || ||||||| Sbjct: 258 ctccagtgcggcgggctcggcggcgcggcgcccgcgacgctggcgcaggtgaacctccac 317 Query: 408 cacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggcttcaacgtgggcctg 467 |||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 318 cacggcaacgaccagacctcgtacggcgtgagcgtggtggacggcttcaacgtgggcctg 377 Query: 468 tccgtgaccc 477 |||||||||| Sbjct: 378 tccgtgaccc 387
>gb|BT017170.1| Zea mays clone EL01N0369A02.c mRNA sequence Length = 1122 Score = 341 bits (172), Expect = 1e-90 Identities = 379/445 (85%), Gaps = 11/445 (2%) Strand = Plus / Plus Query: 41 catggcttcccctaagcttctcctcctgctcgccaccttcctcccgagctgcggcctcct 100 ||||||||| || |||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 67 catggcttctcccaagccgctcctcctgctcgccacctcgttcctgagctgcggcctcct 126 Query: 101 cctggcgg------acttcgccccgatgaccctgaccgtcgtgaacaactgcccgtaccc 154 ||| || ||| |||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 127 ggtggtggccgccgactacgccccaatgaccctgaccgtggtgaacaactgcccctaccc 186 Query: 155 ggtctggccgggcatccaggggagcgccggcagcgaggtcctggaggggggcggcttcta 214 ||| |||||||||||||||| | | |||| ||| ||||||||||| |||||||||| Sbjct: 187 ggtgtggccgggcatccaggccaactccgggcacgacgtcctggagggcggcggcttctt 246 Query: 215 cctcccgtcgctctcccaccgctccttcccggcgcccgcccacgcctggtccggccgcat 274 ||||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct: 247 cctcccgccgctctcccacaagtccttcccggcgccggcccacccctggtccggccgcat 306 Query: 275 ctgggcgcgcaccggctgcacgcccgccggcggggagcagctccgctgcgccacgggcga 334 |||||||||||| |||||| || ||||||| | |||||||| ||||||||||||||| Sbjct: 307 ctgggcgcgcacgggctgcgcgggcgccggc---gcgcagctccactgcgccacgggcga 363 Query: 335 ctgcggcggccggctccagtgcgggggcctcggcggc-gcgg-cgcccgccaccctcgcg 392 ||||||||| |||||||||||||| || ||||||||| |||| ||||||| || || ||| Sbjct: 364 ctgcggcgggcggctccagtgcggcgggctcggcggcagcggacgcccgcgacgctggcg 423 Query: 393 caagtctccctccaccacggcaatgaccagtcgtcctacggcgtgagcgtggtggacggc 452 || | |||||||||||| || ||||| | || |||||||||||||||||||||||| Sbjct: 424 caggagaacctccaccacggaaactaccagacctcgtacggcgtgagcgtggtggacggc 483 Query: 453 ttcaacgtgggcctgtccgtgaccc 477 ||||||||||||||||||||||||| Sbjct: 484 ttcaacgtgggcctgtccgtgaccc 508
>gb|DQ277013.1| Ficus awkeotsang thaumatin-like protein isoform 3 mRNA, complete cds Length = 842 Score = 77.8 bits (39), Expect = 3e-11 Identities = 141/175 (80%) Strand = Plus / Plus Query: 120 atgaccctgaccgtcgtgaacaactgcccgtacccggtctggccgggcatccaggggagc 179 |||| ||||||| | || ||||||||||| ||||| |||||||| | ||||||| | | Sbjct: 100 atgatcctgaccctggtcaacaactgcccttaccccgtctggcccgccatccagcccaac 159 Query: 180 gccggcagcgaggtcctggaggggggcggcttctacctcccgtcgctctcccaccgctcc 239 |||||| | ||||||||| | |||||||||| |||| || ||| ||||||||||| Sbjct: 160 gccggccaccccgtcctggagcgcggcggcttcttcctctactccctcacccaccgctcc 219 Query: 240 ttcccggcgcccgcccacgcctggtccggccgcatctgggcgcgcaccggctgca 294 ||||| || || |||| |||||||||||||||||||| ||||||||||||| Sbjct: 220 ttccctgccccgacccagcactggtccggccgcatctggggccgcaccggctgca 274 Score = 50.1 bits (25), Expect = 0.007 Identities = 126/159 (79%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 320 ctgcgccacgggcgactgcggcggccggctccagtgcgggggcctcggcggcgcggcgcc 379 ||||||||| |||||||||||||||| |||| ||||| ||| ||||||| | || Sbjct: 297 ctgcgccaccggcgactgcggcggccagctcgagtgcaacggcgccggcggcaaaactcc 356 Query: 380 cgccaccctcgcgcaagtctccctccaccacggc---aatgaccagtcgtcctacggcgt 436 ||||||||||| || || ||||||||||||| || |||| || ||||||||||| Sbjct: 357 cgccaccctcgtccagctcagcctccaccacggccacaacgacctctcctcctacggcgt 416 Query: 437 gagcgtggtggacggcttcaacgtgggcctgtccgtgac 475 ||| | || |||||||||||| | |||||| ||||||| Sbjct: 417 cagcctcgtcgacggcttcaaccttggcctgaccgtgac 455
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 317 ccgctgcgccacgggcgactgcggcgg 343 ||||||||||||||||||||||||||| Sbjct: 28442516 ccgctgcgccacgggcgactgcggcgg 28442542 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cgcctggtccggccgcatctggg 279 ||||||||||||||||||||||| Sbjct: 29904578 cgcctggtccggccgcatctggg 29904600 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 154 cggtctggccgggcatccaggggagcgccggca 186 |||| ||||||||||||||| ||||||||||| Sbjct: 28442356 cggtgtggccgggcatccagccgagcgccggca 28442388 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 ggcttcaacgtgggcctgtccgtg 473 |||||||||||||||||| ||||| Sbjct: 20636374 ggcttcaacgtgggcctgaccgtg 20636351 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gcactagccagtagccaccc 29 |||||||||||||||||||| Sbjct: 13564825 gcactagccagtagccaccc 13564844
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 317 ccgctgcgccacgggcgactgcggcgg 343 ||||||||||||||||||||||||||| Sbjct: 155094 ccgctgcgccacgggcgactgcggcgg 155120 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 154 cggtctggccgggcatccaggggagcgccggca 186 |||| ||||||||||||||| ||||||||||| Sbjct: 154934 cggtgtggccgggcatccagccgagcgccggca 154966
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 317 ccgctgcgccacgggcgactgcggcgg 343 ||||||||||||||||||||||||||| Sbjct: 49549 ccgctgcgccacgggcgactgcggcgg 49575 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 154 cggtctggccgggcatccaggggagcgccggca 186 |||| ||||||||||||||| ||||||||||| Sbjct: 49389 cggtgtggccgggcatccagccgagcgccggca 49421
>dbj|AK108191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C02, full insert sequence Length = 1130 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 317 ccgctgcgccacgggcgactgcggcgg 343 ||||||||||||||||||||||||||| Sbjct: 339 ccgctgcgccacgggcgactgcggcgg 365 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 154 cggtctggccgggcatccaggggagcgccggca 186 |||| ||||||||||||||| ||||||||||| Sbjct: 179 cggtgtggccgggcatccagccgagcgccggca 211
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgcacgc 297 ||||||||||||| | ||||||||||| |||||||||| Sbjct: 7583091 ctggtccggccgcctgtgggcgcgcacgggctgcacgc 7583054 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 29555262 cctcggcggcgcgccgcccgtcaccctcgc 29555233
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgcacgc 297 ||||||||||||| | ||||||||||| |||||||||| Sbjct: 7580926 ctggtccggccgcctgtgggcgcgcacgggctgcacgc 7580889 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 29646684 cctcggcggcgcgccgcccgtcaccctcgc 29646655
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgcacgc 297 ||||||||||||| | ||||||||||| |||||||||| Sbjct: 111987 ctggtccggccgcctgtgggcgcgcacgggctgcacgc 111950
>dbj|AK100431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088H12, full insert sequence Length = 1720 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgcacgc 297 ||||||||||||| | ||||||||||| |||||||||| Sbjct: 482 ctggtccggccgcctgtgggcgcgcacgggctgcacgc 519
>gb|AF175270.1|AF175270 Benincasa hispida osmotin-like protein (olp) gene, complete cds Length = 1501 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 204 ggcggcttctacctcccgtcgctctcccaccgctccttcccggcgcccgcccacgcctgg 263 |||||||||| |||||| || |||||||||||||| ||||| || ||| ||| |||| Sbjct: 601 ggcggcttcttcctcccttccctctcccaccgctctttccccgctccctaccagcactgg 660 Query: 264 tccggccgcatctgggcgcgcaccggctgc 293 || |||||| ||||||| || || |||||| Sbjct: 661 tctggccgcgtctgggctcgaacaggctgc 690 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 125 cctgaccgtcgtgaacaactgcccgtacccggtctggccgggcatccag 173 ||||||| |||| ||||||||||| |||||| ||||||| | ||||||| Sbjct: 522 cctgaccctcgtcaacaactgcccctacccgatctggcccgccatccag 570
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 317 ccgctgcgccacgggcgactgcggcggc 344 ||||||||||||||||||||||| |||| Sbjct: 139299 ccgctgcgccacgggcgactgcgccggc 139272 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 105884 gctgcgccaccggcgactgcggcggc 105859 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 91559 gctgcgccaccggcgactgcggcggc 91534 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 tgcgccacgggcgactgcggcggc 344 |||||||| ||||||||||||||| Sbjct: 115102 tgcgccaccggcgactgcggcggc 115079
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 317 ccgctgcgccacgggcgactgcggcggc 344 ||||||||||||||||||||||| |||| Sbjct: 27016913 ccgctgcgccacgggcgactgcgccggc 27016886 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 26982440 gctgcgccaccggcgactgcggcggc 26982415 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 26968115 gctgcgccaccggcgactgcggcggc 26968090 Score = 44.1 bits (22), Expect = 0.41 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 249 cccgcccacgcc-tggtccggccgcatctgggcgcgcaccggctgc 293 |||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 23443936 cccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgc 23443981 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 tgcgccacgggcgactgcggcggc 344 |||||||| ||||||||||||||| Sbjct: 26991908 tgcgccaccggcgactgcggcggc 26991885
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 317 ccgctgcgccacgggcgactgcggcggc 344 ||||||||||||||||||||||| |||| Sbjct: 26942502 ccgctgcgccacgggcgactgcgccggc 26942475 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 26909087 gctgcgccaccggcgactgcggcggc 26909062 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 26894762 gctgcgccaccggcgactgcggcggc 26894737 Score = 44.1 bits (22), Expect = 0.41 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 249 cccgcccacgcc-tggtccggccgcatctgggcgcgcaccggctgc 293 |||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 23372127 cccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgc 23372172 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 tgcgccacgggcgactgcggcggc 344 |||||||| ||||||||||||||| Sbjct: 26918305 tgcgccaccggcgactgcggcggc 26918282
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cgcctggtccggccgcatctggg 279 ||||||||||||||||||||||| Sbjct: 100091 cgcctggtccggccgcatctggg 100113
>gb|L76632.1|TOMOLP Lycopersicon esculentum osmotin-like protein mRNA, complete cds Length = 851 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgca 294 |||||||||||| |||||||| || |||||||||| Sbjct: 234 ctggtccggccgaatctgggctcgtaccggctgca 268
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 47256 cctcggcggcgcgccgcccgtcaccctcgc 47227
>ref|XM_476601.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2082 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 1356 cctcggcggcgcgccgcccgtcaccctcgc 1385
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 ||||||| |||||||||||||||||| Sbjct: 93410 gctgcgcgacgggcgactgcggcggc 93385
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 ||||||| |||||||||||||||||| Sbjct: 15291 gctgcgcgacgggcgactgcggcggc 15266
>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster, complete cds Length = 27448 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 cttcccggcgcccgcccacgcc 260 |||||||||||||||||||||| Sbjct: 2614 cttcccggcgcccgcccacgcc 2635
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 319 gctgcgccacgggcgactgcggcggc 344 ||||||| |||||||||||||||||| Sbjct: 28288610 gctgcgcgacgggcgactgcggcggc 28288585 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 433 gcgtgagcgtggtggacggcttcaacgtg 461 |||||||| |||| ||||||||||||||| Sbjct: 28152446 gcgtgagcctggtcgacggcttcaacgtg 28152474
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 2132669 cctcggcggcgcgccgcccgtcaccctcgc 2132640
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 26533781 cctcggcggcgcgccgcccgtcaccctcgc 26533752
>gb|AC120983.6| Oryza sativa chromosome 3 BAC OSJNBb0011H13 genomic sequence, complete sequence Length = 132782 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 77892 cctcggcggcgcgccgcccgtcaccctcgc 77863
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 caggggagcgccggcagcgagg 192 |||||||||||||||||||||| Sbjct: 815998 caggggagcgccggcagcgagg 815977
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 571 cctcggcggcgcgccgcccgtcaccctcgc 542
>dbj|AK099946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123C17, full insert sequence Length = 796 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 gctgcgccacgggcgactgcggcggc 344 |||||||||| ||||||||||||||| Sbjct: 339 gctgcgccaccggcgactgcggcggc 364
>dbj|AK068276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136G04, full insert sequence Length = 1027 Score = 44.1 bits (22), Expect = 0.41 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 249 cccgcccacgcc-tggtccggccgcatctgggcgcgcaccggctgc 293 |||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 243 cccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgc 288
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 ctgcgccacgggcgactgcggc 341 |||||||||||||||||||||| Sbjct: 4341 ctgcgccacgggcgactgcggc 4362
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 362 cctcggcggcgcggcgcccgccaccctcgc 391 ||||||||||||| |||||| ||||||||| Sbjct: 88462 cctcggcggcgcgccgcccgtcaccctcgc 88433
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 44.1 bits (22), Expect = 0.41 Identities = 41/46 (89%), Gaps = 1/46 (2%) Strand = Plus / Minus Query: 249 cccgcccacgcc-tggtccggccgcatctgggcgcgcaccggctgc 293 |||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 58223 cccgcccacgccgtggtccggccgcgtcgccgcgcgcaccggctgc 58178
>ref|NM_189031.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 261 tggtccggccgcatctgggcgcgcaccgg 289 ||||||||||| || |||||||||||||| Sbjct: 232 tggtccggccggatatgggcgcgcaccgg 260
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ccggcagcgaggtcctggagg 201 ||||||||||||||||||||| Sbjct: 193512 ccggcagcgaggtcctggagg 193492
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 433 gcgtgagcgtggtggacggcttcaacgtg 461 |||||||| |||| ||||||||||||||| Sbjct: 111001 gcgtgagcctggtcgacggcttcaacgtg 111029
>ref|XM_567981.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL04300) partial mRNA Length = 3729 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ccggcagcgaggtcctggagg 201 ||||||||||||||||||||| Sbjct: 1106 ccggcagcgaggtcctggagg 1086
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 428 ctacggcgtgagcgtggtggacggc 452 ||||||||||| ||||||||||||| Sbjct: 224743 ctacggcgtgatcgtggtggacggc 224719
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 261 tggtccggccgcatctgggcgcgcaccggctgc 293 ||||| |||||| ||||||||||| |||||||| Sbjct: 27512828 tggtcgggccgcttctgggcgcgctccggctgc 27512860 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 tggtccggccgcatctgggcgcgcaccgg 289 ||||||||||| || |||||||||||||| Sbjct: 25694150 tggtccggccggatatgggcgcgcaccgg 25694122
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 ggggcctcggcggcgcggcgc 378 ||||||||||||||||||||| Sbjct: 1459312 ggggcctcggcggcgcggcgc 1459332 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gggcctcggcggcgcggcgc 378 |||||||||||||||||||| Sbjct: 3517917 gggcctcggcggcgcggcgc 3517936 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gagcagctccgctgcgccac 328 |||||||||||||||||||| Sbjct: 3147878 gagcagctccgctgcgccac 3147897
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 tggtccggccgcatctgggcgcgcaccgg 289 ||||||||||| || |||||||||||||| Sbjct: 71898 tggtccggccggatatgggcgcgcaccgg 71870
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 261 tggtccggccgcatctgggcgcgcaccggctgc 293 ||||| |||||| ||||||||||| |||||||| Sbjct: 76077 tggtcgggccgcttctgggcgcgctccggctgc 76109
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ggggcggcttctacctcccgt 222 ||||||||||||||||||||| Sbjct: 1601589 ggggcggcttctacctcccgt 1601609
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 433 gcgtgagcgtggtggacggcttcaacgtg 461 |||||||| |||| ||||||||||||||| Sbjct: 28137324 gcgtgagcctggtcgacggcttcaacgtg 28137352
>gb|U57787.1|ASU57787 Avena sativa permatin precursor mRNA, complete cds Length = 846 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 ctgcgccacgggcgactgcggcggc 344 ||||| ||||||||||||||||||| Sbjct: 280 ctgcgtcacgggcgactgcggcggc 304
>ref|XM_512109.1| PREDICTED: Pan troglodytes similar to CD33 antigen-like 3 (LOC455394), mRNA Length = 2598 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 2213 cgcccgccctcgcctggtccggcc 2236
>ref|XM_472405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2220 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcggcgcggcgcccgccacc 386 |||||||||||||||||||| Sbjct: 110 gcggcgcggcgcccgccacc 129
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 atctgggcgcgcaccggctg 292 |||||||||||||||||||| Sbjct: 3108686 atctgggcgcgcaccggctg 3108667
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgcgcaccggctgcacgccc 299 |||||||||||||||||||| Sbjct: 1774257 cgcgcaccggctgcacgccc 1774238
>ref|XM_474578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tctgggcgcgcaccggctgc 293 |||||||||||||||||||| Sbjct: 290 tctgggcgcgcaccggctgc 309
>ref|XM_473489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2805 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cgggcgactgcggcggccgg 347 |||||||||||||||||||| Sbjct: 340 cgggcgactgcggcggccgg 321
>ref|XM_473376.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 agctccgctgcgccacgggcgact 336 |||||||| ||||||||||||||| Sbjct: 272 agctccgcggcgccacgggcgact 295
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gcgggggcctcggcggcgcggcgc 378 ||||||||| |||||||||||||| Sbjct: 37037 gcgggggccgcggcggcgcggcgc 37014
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cggcgcggcgcccgccaccc 387 |||||||||||||||||||| Sbjct: 1420574 cggcgcggcgcccgccaccc 1420593
>gb|AY512591.1| Schistocerca gregaria thaumatin-like protein 1 (Tau1) mRNA, complete cds Length = 894 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 267 ggccgcatctgggcgcgcaccggctgca 294 ||||||||||||| ||||||||||||| Sbjct: 253 ggccgcatctggggccgcaccggctgca 280
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 1384612 cgggggcctcggcggcgcgg 1384593 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 1213020 cgggggcctcggcggcgcgg 1213039
>ref|XM_953549.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ccacgcctggtccggccgca 273 |||||||||||||||||||| Sbjct: 1368 ccacgcctggtccggccgca 1387
>ref|XM_330796.1| Neurospora crassa OR74A hypothetical protein (NCU09875.1) partial mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ccacgcctggtccggccgca 273 |||||||||||||||||||| Sbjct: 1368 ccacgcctggtccggccgca 1387
>ref|XM_607348.2| PREDICTED: Bos taurus similar to muscle specific ring finger protein 1, transcript variant 1 (LOC528912), mRNA Length = 1614 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 717 aagcttctcctcctgctcgc 698
>ref|XM_879084.1| PREDICTED: Bos taurus similar to muscle specific ring finger protein 1, transcript variant 5 (LOC528912), mRNA Length = 1629 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 732 aagcttctcctcctgctcgc 713
>ref|XM_879051.1| PREDICTED: Bos taurus similar to muscle specific ring finger protein 1, transcript variant 4 (LOC528912), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 681 aagcttctcctcctgctcgc 662
>ref|XM_879015.1| PREDICTED: Bos taurus similar to muscle specific ring finger protein 1, transcript variant 3 (LOC528912), mRNA Length = 1650 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 753 aagcttctcctcctgctcgc 734
>ref|XM_878989.1| PREDICTED: Bos taurus similar to muscle specific ring finger protein 1, transcript variant 2 (LOC528912), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 687 aagcttctcctcctgctcgc 668
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cggcgcggcgcccgccaccc 387 |||||||||||||||||||| Sbjct: 2646682 cggcgcggcgcccgccaccc 2646701
>ref|XM_994560.1| PREDICTED: Mus musculus hypothetical LOC433404 (LOC433404), mRNA Length = 3232 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcgccaccttcctcccgag 88 |||||||||||||||||||| Sbjct: 331 ctcgccaccttcctcccgag 312
>ref|XM_488935.3| PREDICTED: Mus musculus hypothetical LOC433404 (LOC433404), mRNA Length = 3203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcgccaccttcctcccgag 88 |||||||||||||||||||| Sbjct: 331 ctcgccaccttcctcccgag 312
>ref|XM_990768.1| PREDICTED: Mus musculus hypothetical protein LOC667477 (LOC667477), mRNA Length = 3216 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcgccaccttcctcccgag 88 |||||||||||||||||||| Sbjct: 331 ctcgccaccttcctcccgag 312
>ref|XM_754162.1| Ustilago maydis 521 hypothetical protein (UM03108.1) partial mRNA Length = 3963 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 ctcctcctgctcgccaccttcctc 83 |||||||| ||||||||||||||| Sbjct: 429 ctcctcctcctcgccaccttcctc 452
>gb|BC112721.1| Bos taurus similar to muscle specific ring finger protein 1, transcript variant 1, mRNA (cDNA clone MGC:137423 IMAGE:8178900), complete cds Length = 1836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aagcttctcctcctgctcgc 73 |||||||||||||||||||| Sbjct: 855 aagcttctcctcctgctcgc 836
>emb|AL590639.9| Human DNA sequence from clone RP11-496H15 on chromosome 1 Contains the 3' end of the gene for retinoid binding protein 7 (CRBPIV), the 5' end of the UBE4B gene for ubiquitination factor E4B (UFD2 homolog, yeast), a pseudogene similar to part of ribosomal protein L21 (RPL21) and a pseudogene similar to part of phosphoglycerate mutase, complete sequence Length = 96075 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ctcggcggcgcggcgcccgc 382 |||||||||||||||||||| Sbjct: 34015 ctcggcggcgcggcgcccgc 34034
>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence Length = 155807 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 48546 cgcccgccctcgcctggtccggcc 48523
>emb|BX842633.1| Neurospora crassa DNA linkage group I cosmid contig 53H1 Length = 74723 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcttcccctaagcttctcct 64 |||||||||||||||||||| Sbjct: 58366 gcttcccctaagcttctcct 58347
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 2081 cgggggcctcggcggcgcgg 2062
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 179077 cgggggcctcggcggcgcgg 179096
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tcggcggcgcggcgcccgcc 383 |||||||||||||||||||| Sbjct: 216133 tcggcggcgcggcgcccgcc 216114
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgggcgcgcaccggctgcacgcc 298 |||||||||| ||||||||||||| Sbjct: 104849 ctgggcgcgcgccggctgcacgcc 104826
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgggcgcgcaccggctgcacgcc 298 |||||||||| ||||||||||||| Sbjct: 108830 ctgggcgcgcgccggctgcacgcc 108807
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cggcgcggcgcccgccaccc 387 |||||||||||||||||||| Sbjct: 1736787 cggcgcggcgcccgccaccc 1736768
>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14 Length = 299450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 71768 cgggggcctcggcggcgcgg 71749
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgggggcctcggcggcgcgg 375 |||||||||||||||||||| Sbjct: 227224 cgggggcctcggcggcgcgg 227243
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tctgggcgcgcaccggctgc 293 |||||||||||||||||||| Sbjct: 19844 tctgggcgcgcaccggctgc 19825
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcggcgcggcgcccgccacc 386 |||||||||||||||||||| Sbjct: 137984 gcggcgcggcgcccgccacc 138003
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcggcgcggcgcccgccacc 386 |||||||||||||||||||| Sbjct: 20771 gcggcgcggcgcccgccacc 20790
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 agctccgctgcgccacgggcgact 336 |||||||| ||||||||||||||| Sbjct: 112321 agctccgcggcgccacgggcgact 112298
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cgggcgactgcggcggccgg 347 |||||||||||||||||||| Sbjct: 72249 cgggcgactgcggcggccgg 72230
>emb|AJ617360.1| Encephalomyocarditis virus partial gene for polyprotein, leader protein and capsd coding region, isolate B440/95, genomic RNA Length = 2703 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ccaccacggcaatgaccagt 423 |||||||||||||||||||| Sbjct: 1069 ccaccacggcaatgaccagt 1050
>ref|NM_213602.1| Homo sapiens CD33 molecule-like 3 (CD33L3), mRNA Length = 1523 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 730 cgcccgccctcgcctggtccggcc 753
>dbj|AK095432.1| Homo sapiens cDNA FLJ38113 fis, clone D3OST2002417 Length = 2735 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 434 cgcccgccctcgcctggtccggcc 457
>dbj|AK092746.1| Homo sapiens cDNA FLJ35427 fis, clone SMINT2001731 Length = 2375 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 281 cgcccgccctcgcctggtccggcc 304
>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence Length = 186783 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 7983 cgcccgccctcgcctggtccggcc 8006
>gb|AC073957.7| Homo sapiens BAC clone RP11-449P15 from 7, complete sequence Length = 196204 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cgtgggcctgtccgtgaccc 477 |||||||||||||||||||| Sbjct: 29072 cgtgggcctgtccgtgaccc 29091
>gb|AY642114.1| Dicentrarchus labrax luteinizing hormone receptor precursor (lhr) mRNA, complete cds Length = 3172 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagcgccggcagcgaggtcc 195 |||||||||||||||||||| Sbjct: 182 gagcgccggcagcgaggtcc 163
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 263 gtccggccgcatctgggcgcgcaccggc 290 |||||||||||||| |||||||||||| Sbjct: 2129055 gtccggccgcatcttcgcgcgcaccggc 2129082
>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds Length = 11462 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 cggctgcacgcccgccggcg 306 |||||||||||||||||||| Sbjct: 7451 cggctgcacgcccgccggcg 7432
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 cgggcgactgcggcggccgg 347 |||||||||||||||||||| Sbjct: 28065023 cgggcgactgcggcggccgg 28065004 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 agctccgctgcgccacgggcgact 336 |||||||| ||||||||||||||| Sbjct: 27169678 agctccgcggcgccacgggcgact 27169655 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcggcgcggcgcccgccacc 386 |||||||||||||||||||| Sbjct: 20407351 gcggcgcggcgcccgccacc 20407370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tctgggcgcgcaccggctgc 293 |||||||||||||||||||| Sbjct: 4392112 tctgggcgcgcaccggctgc 4392093
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgcgccacgggcgactgcgg 340 |||||||||||||||||||| Sbjct: 20787815 tgcgccacgggcgactgcgg 20787834
>gb|AC080129.26| Homo sapiens 3 BAC RP11-135A1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cggcgcccgccaccctcgcg 392 |||||||||||||||||||| Sbjct: 37225 cggcgcccgccaccctcgcg 37244
>gb|AY971691.1| Fungal sp. 21.49 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 459 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gcctcggcggcgcggcgccc 380 |||||||||||||||||||| Sbjct: 82 gcctcggcggcgcggcgccc 101
>gb|AY971690.1| Fungal sp. 25.36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 459 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 gcctcggcggcgcggcgccc 380 |||||||||||||||||||| Sbjct: 82 gcctcggcggcgcggcgccc 101
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cggcggcgcggcgcccgcca 384 |||||||||||||||||||| Sbjct: 8584270 cggcggcgcggcgcccgcca 8584251
>ref|XM_579871.1| PREDICTED: Rattus norvegicus LOC498802 (LOC498802), mRNA Length = 2641 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcgccaccttcctcccgag 88 |||||||||||||||||||| Sbjct: 1368 ctcgccaccttcctcccgag 1349
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0459H02 Length = 168230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gcactagccagtagccaccc 29 |||||||||||||||||||| Sbjct: 93315 gcactagccagtagccaccc 93334
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 ggcttcaacgtgggcctgtccgtg 473 |||||||||||||||||| ||||| Sbjct: 58781 ggcttcaacgtgggcctgaccgtg 58758
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgcgccacgggcgactgcgg 340 |||||||||||||||||||| Sbjct: 62844 tgcgccacgggcgactgcgg 62863
>dbj|AK172835.1| Homo sapiens cDNA FLJ23996 fis, clone HRC12337 Length = 1523 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 cgcccgcccacgcctggtccggcc 270 ||||||||| |||||||||||||| Sbjct: 730 cgcccgccctcgcctggtccggcc 753
>emb|AL928805.18| Mouse DNA sequence from clone RP23-291H20 on chromosome 2, complete sequence Length = 192688 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 cttctcctcctgctcgccaccttcctcc 84 |||| |||||||||| |||||||||||| Sbjct: 149899 cttcccctcctgctccccaccttcctcc 149872
>dbj|AK110938.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-G07, full insert sequence Length = 1418 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gcactagccagtagccaccc 29 |||||||||||||||||||| Sbjct: 569 gcactagccagtagccaccc 588
>dbj|AK107984.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-E09, full insert sequence Length = 956 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tctgggcgcgcaccggctgc 293 |||||||||||||||||||| Sbjct: 358 tctgggcgcgcaccggctgc 377
>dbj|AK073418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C16, full insert sequence Length = 2731 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcggcgcggcgcccgccacc 386 |||||||||||||||||||| Sbjct: 263 gcggcgcggcgcccgccacc 282
>dbj|AK069182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009L15, full insert sequence Length = 693 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 tgcgccacgggcgactgcggcggc 344 |||||||| ||||||||||||||| Sbjct: 317 tgcgccaccggcgactgcggcggc 340
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 caccggctgcacgcccgccggcgg 307 ||||||||||||||| |||||||| Sbjct: 1240498 caccggctgcacgccggccggcgg 1240475
>dbj|AK064119.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B10, full insert sequence Length = 1922 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 agctccgctgcgccacgggcgact 336 |||||||| ||||||||||||||| Sbjct: 626 agctccgcggcgccacgggcgact 649
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 tctgggcgcgcaccggctgc 293 |||||||||||||||||||| Sbjct: 58071 tctgggcgcgcaccggctgc 58052
>dbj|AP003168.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-263C24, complete sequence Length = 122001 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 57 cttctcctcctgctcgccaccttcctcc 84 ||||||||||| ||| |||||||||||| Sbjct: 26537 cttctcctcctcctccccaccttcctcc 26564
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tcggcggcgcggcgcccgcc 383 |||||||||||||||||||| Sbjct: 2288859 tcggcggcgcggcgcccgcc 2288878
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tcggcggcgcggcgcccgcc 383 |||||||||||||||||||| Sbjct: 1738334 tcggcggcgcggcgcccgcc 1738315
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 agctccgctgcgccacgggcgact 336 |||||||| ||||||||||||||| Sbjct: 768 agctccgcggcgccacgggcgact 745
>gb|AF001528.1|AF001528 Musa acuminata ripening-associated protein mRNA, partial cds Length = 580 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 266 cggccgcatctgggcgcgcaccggctgc 293 |||||||||||||| |||||||||||| Sbjct: 201 cggccgcatctggggccgcaccggctgc 228
>gb|AF016328.1|AF016328 Hordeum vulgare Barperm2 (perm2) mRNA, partial cds Length = 601 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 tgcgccacgggcgactgcggcggc 344 |||||||| ||||||||||||||| Sbjct: 102 tgcgccaccggcgactgcggcggc 125
>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120, complete sequence Length = 137804 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cactagccagtagccaccca 30 |||||||||||||||||||| Sbjct: 37439 cactagccagtagccaccca 37458
>dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46K10, TM0112, complete sequence Length = 103522 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 260 ctggtccggccgcatctgggcgcgcaccggctgcac 295 ||||||||||||| ||||||| || || |||||||| Sbjct: 56650 ctggtccggccgcttctgggcccgaactggctgcac 56615
>gb|L19314.1|HUMHAIRY Human HRY gene, complete cds Length = 5552 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 cggcgcccgccaccctcgcg 392 |||||||||||||||||||| Sbjct: 2599 cggcgcccgccaccctcgcg 2580
>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete sequence Length = 217726 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ctcgccaccttcctcccgag 88 |||||||||||||||||||| Sbjct: 37523 ctcgccaccttcctcccgag 37542 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,310,598 Number of Sequences: 3902068 Number of extensions: 3310598 Number of successful extensions: 83437 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 79571 Number of HSP's gapped (non-prelim): 3868 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
