ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 806 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 186 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 245 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 246 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 305 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 306 gggacgccttcgc 318
>ref|XM_469436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1849 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 187 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 246 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 247 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 306 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 307 gggacgccttcgc 319
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 85839 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 85780 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 85779 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 85720 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 85719 gggacgccttcgc 85707 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 94604 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 94545 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggac 420 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 94544 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggac 94490
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 27950111 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 27950052 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 27950051 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 27949992 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 27949991 gggacgccttcgc 27949979 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 27958876 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 27958817 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggac 420 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 27958816 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggac 27958762
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 74915 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 74974 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 74975 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 75034 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 75035 gggacgccttcgc 75047 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 66150 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 66209 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggac 420 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 66210 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggac 66264
>gb|U28047.2|OSU28047 Oryza sativa beta-glucosidase mRNA, complete cds Length = 1909 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 198 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 257 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 258 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 317 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 318 gggacgccttcgc 330
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Minus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 28041435 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 28041376 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 28041375 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 28041316 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 28041315 gggacgccttcgc 28041303 Score = 117 bits (59), Expect = 3e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 28050200 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 28050141 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggac 420 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 28050140 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggac 28050086
>dbj|AK105026.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H02, full insert sequence Length = 1846 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 190 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 249 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 250 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 309 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 310 gggacgccttcgc 322
>dbj|AK103027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C01, full insert sequence Length = 1857 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 189 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 248 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 249 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 308 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 309 gggacgccttcgc 321
>dbj|AK100165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021K07, full insert sequence Length = 1894 Score = 129 bits (65), Expect = 9e-27 Identities = 116/133 (87%) Strand = Plus / Plus Query: 296 ccaactggctgggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacgg 355 ||||||||||||||||||||||||| || | ||||||||| | ||||| |||||||||| Sbjct: 193 ccaactggctgggcgggctgagccgcgccgcgttccccaagcggttcgtgttcgggacgg 252 Query: 356 cgacgtcggcgtaccaggtggagggcatggccaccggcggcggccgcgggccctccatct 415 | ||||| ||||||||||| ||||||||||| | ||||||||||||||| ||||||| Sbjct: 253 ccacgtccgcgtaccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatct 312 Query: 416 gggacgcgttcgc 428 ||||||| ||||| Sbjct: 313 gggacgccttcgc 325
>ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2080 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 212 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 271 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggacgcgtt 425 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| | || Sbjct: 272 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggacccctt 331 Query: 426 cgcccacgtcccaggaaacattgcggg 452 || |||| |||||| || |||||||| Sbjct: 332 cgtccacaccccagggaatattgcggg 358
>dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011K21, full insert sequence Length = 2082 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||| Sbjct: 214 gggcgggctgagccgggccgcgttccccaaggggttcgtgttcgggacggcgacgtcggc 273 Query: 366 gtaccaggtggagggcatggccaccggcggcggccgcgggccctccatctgggacgcgtt 425 | |||||| ||||||||||| | ||||||||||||||| |||||||||||| | || Sbjct: 274 attccaggtcgagggcatggcggcgtccggcggccgcgggccgtccatctgggacccctt 333 Query: 426 cgcccacgtcccaggaaacattgcggg 452 || |||| |||||| || |||||||| Sbjct: 334 cgtccacaccccagggaatattgcggg 360
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 340 ttcgtcttcgggacggcgacgtcggcgtaccaggtggagggcatggccaccggcggcggc 399 ||||| |||||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct: 392 ttcgtgttcgggacggcggcgtcggcgtaccaggtggagggcatggcgaggcagggcggc 451 Query: 400 cgcgggccctccatctgggacgcgttcg 427 |||||||||| |||||||||||| |||| Sbjct: 452 cgcgggccctgcatctgggacgccttcg 479
>ref|NM_193730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 363 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||| | |||||| ||| ||||| |||||||||||| ||||||| Sbjct: 138 gggcgggctgagccggcggagcttcccggcggggttcgtgttcgggacggcggcgtcggc 197 Query: 366 gtaccaggtggagggcatggc 386 ||||||||||||||||||||| Sbjct: 198 gtaccaggtggagggcatggc 218
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||| | |||||| ||| ||||| |||||||||||| ||||||| Sbjct: 17752519 gggcgggctgagccggcggagcttcccggcggggttcgtgttcgggacggcggcgtcggc 17752578 Query: 366 gtaccaggtggagggcatggc 386 ||||||||||||||||||||| Sbjct: 17752579 gtaccaggtggagggcatggc 17752599
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||| | |||||| ||| ||||| |||||||||||| ||||||| Sbjct: 134054 gggcgggctgagccggcggagcttcccggcggggttcgtgttcgggacggcggcgtcggc 134113 Query: 366 gtaccaggtggagggcatggc 386 ||||||||||||||||||||| Sbjct: 134114 gtaccaggtggagggcatggc 134134
>dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006J10, full insert sequence Length = 1833 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 306 gggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggc 365 |||||||||||||||| | |||||| ||| ||||| |||||||||||| ||||||| Sbjct: 297 gggcgggctgagccggcggagcttcccggcggggttcgtgttcgggacggcggcgtcggc 356 Query: 366 gtaccaggtggagggcatggc 386 ||||||||||||||||||||| Sbjct: 357 gtaccaggtggagggcatggc 377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 307 ggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggcg 366 ||||||||||||||| ||||||| |||| ||||| ||||| ||||| |||||||| Sbjct: 27562208 ggcgggctgagccggcgagccttcccggaggggttcgtgttcggcacggccgcgtcggcg 27562267 Query: 367 taccaggtggagggcatggc 386 |||||||||||||||||||| Sbjct: 27562268 taccaggtggagggcatggc 27562287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tgggcgggctgagccgggcgt 325 ||||||||||||||||||||| Sbjct: 19834274 tgggcgggctgagccgggcgt 19834254
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 307 ggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggcg 366 ||||||||||||||| ||||||| |||| ||||| ||||| ||||| |||||||| Sbjct: 19201 ggcgggctgagccggcgagccttcccggaggggttcgtgttcggcacggccgcgtcggcg 19260 Query: 367 taccaggtggagggcatggc 386 |||||||||||||||||||| Sbjct: 19261 taccaggtggagggcatggc 19280
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 307 ggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggcg 366 ||||||||||||||| ||||||| |||| ||||| ||||| ||||| |||||||| Sbjct: 126179 ggcgggctgagccggcgagccttcccggaggggttcgtgttcggcacggccgcgtcggcg 126238 Query: 367 taccaggtggagggcatggc 386 |||||||||||||||||||| Sbjct: 126239 taccaggtggagggcatggc 126258
>dbj|AK068499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M12, full insert sequence Length = 1897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 307 ggcgggctgagccgggcgtccttccccaagggcttcgtcttcgggacggcgacgtcggcg 366 ||||||||||||||| ||||||| |||| ||||| ||||| ||||| |||||||| Sbjct: 117 ggcgggctgagccggcgagccttcccggaggggttcgtgttcggcacggccgcgtcggcg 176 Query: 367 taccaggtggagggcatggc 386 |||||||||||||||||||| Sbjct: 177 taccaggtggagggcatggc 196
>gb|AY106991.1| Zea mays PCO088410 mRNA sequence Length = 1182 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 337 ggcttcgtcttcgggacggcgacgtcggcgtaccaggtggagggcatggcca 388 |||||||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 217 ggcttcgtcttcgggacggccgcgtcggcgtaccaggtcgaggggatggcca 268
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 336 gggcttcgtcttcgggacggcgacgtcggcgtaccaggtggaggg 380 ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 13144100 gggcttcgtcttcggcaccgcgtcgtcggcgtaccaggtggaggg 13144144
>dbj|AK071058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077M13, full insert sequence Length = 1796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 336 gggcttcgtcttcgggacggcgacgtcggcgtaccaggtggaggg 380 ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 129 gggcttcgtcttcggcaccgcgtcgtcggcgtaccaggtggaggg 173
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 336 gggcttcgtcttcgggacggcgacgtcggcgtaccaggtggaggg 380 ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 13098374 gggcttcgtcttcggcaccgcgtcgtcggcgtaccaggtggaggg 13098418
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 336 gggcttcgtcttcgggacggcgacgtcggcgtaccaggtggaggg 380 ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 186643 gggcttcgtcttcggcaccgcgtcgtcggcgtaccaggtggaggg 186599
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 336 gggcttcgtcttcgggacggcgacgtcggcgtaccaggtggaggg 380 ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct: 133303 gggcttcgtcttcggcaccgcgtcgtcggcgtaccaggtggaggg 133347
>gb|AY109400.1| Zea mays CL1052_1 mRNA sequence Length = 2031 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgcccacgtcccaggaaacattgc 449 |||||| || |||||||||||||| | ||||| |||||||||||||| ||||| Sbjct: 37 cggccggggcccctccatctgggattcattcgcgcacgtcccaggaaatattgc 90
>gb|BT016439.1| Zea mays clone Contig272 mRNA sequence Length = 1566 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 406 ccctccatctgggacgcgttcgcccacgtcccaggaaacattgc 449 |||||||||||||| | ||||| |||||||||||||| ||||| Sbjct: 50 ccctccatctgggattcattcgcgcacgtcccaggaaatattgc 93
>emb|Y16753.3|TTBETAGLY Thermus thermophilus b-gly gene and partial gene for sugar permease Length = 1950 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 610 cggccgggggccttccatctgggacgccttcgccca 645
>emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-bispecific nitrate reductase Length = 3538 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 216 gatggccgcgaggtcggcgctgctgctc 243 ||||||||||||||||||| |||||||| Sbjct: 2563 gatggccgcgaggtcggcgttgctgctc 2536
>gb|AY130255.1| Thermus thermophilus strain HB8 beta-glycosidase gene, complete cds Length = 1933 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 598 cggccgggggccttccatctgggacgccttcgccca 633
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 77398 cggccgggggccttccatctgggacgccttcgccca 77433
>gb|AF135400.2|AF135400 Thermus thermophilus strain TH125 beta-glycosidase (bglT) gene, complete cds Length = 2506 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 464 cggccgggggccttccatctgggacgccttcgccca 499
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 38390 cggccgggggccttccatctgggacgccttcgccca 38425
>dbj|AB034947.1| Thermus sp. Z-1 gene for beta-glucosidase, complete cds Length = 2028 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccca 431 |||||| ||||| |||||||||||||| |||||||| Sbjct: 599 cggccgggggccttccatctgggacgccttcgccca 634
>gb|AY130254.1| Thermus thermophilus strain AT-62 putative sugar permease and beta-glycosidase genes, complete cds Length = 3997 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccc 430 |||||| ||||| |||||||||||||| ||||||| Sbjct: 1697 cggccgggggccttccatctgggacgccttcgccc 1731
>gb|AY130258.1| Thermus sp. IB-21 clone tib10 beta-glycosidase gene, complete cds Length = 1805 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 396 cggccgcgggccctccatctgggacgcgttcgccc 430 |||||| ||||| |||||||||||||| ||||||| Sbjct: 417 cggccgggggccttccatctgggacgccttcgccc 451
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 390 cggcggcggccgcgggccctccatct 415 |||||||||| ||||||||||||||| Sbjct: 67746 cggcggcggcggcgggccctccatct 67771
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 ggccgcgaggtcggcgctgctg 240 |||||||||||||||||||||| Sbjct: 6602780 ggccgcgaggtcggcgctgctg 6602759
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aggccagcggggtgggtgggc 157 ||||||||||||||||||||| Sbjct: 207197 aggccagcggggtgggtgggc 207217
>ref|XM_478415.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tgggcgggctgagccgggcgt 325 ||||||||||||||||||||| Sbjct: 430 tgggcgggctgagccgggcgt 450
>ref|NM_137194.1| Drosophila melanogaster CG8179-RA (CG8179), mRNA Length = 5005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggcatggccaccggcggcgg 398 ||||||||||||||||||||| Sbjct: 249 gggcatggccaccggcggcgg 229
>gb|AY095177.1| Drosophila melanogaster GH12942 full insert cDNA Length = 4808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggcatggccaccggcggcgg 398 ||||||||||||||||||||| Sbjct: 36 gggcatggccaccggcggcgg 16
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cggcggcggccgcgggccctccatc 414 |||||||||||||||||| |||||| Sbjct: 14781531 cggcggcggccgcgggccgtccatc 14781507
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggcatggccaccggcggcgg 398 ||||||||||||||||||||| Sbjct: 109780 gggcatggccaccggcggcgg 109760
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 ggctgggcgggctgagccggg 322 ||||||||||||||||||||| Sbjct: 18009 ggctgggcgggctgagccggg 18029
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ggcgctgctgctcgcgctggt 251 ||||||||||||||||||||| Sbjct: 881559 ggcgctgctgctcgcgctggt 881579 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 3954992 gccaccggcggcggccgcgg 3954973 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccggcggcggccgcgggccc 408 |||||||||||||||||||| Sbjct: 525129 ccggcggcggccgcgggccc 525110
>dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055I13 Length = 169486 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cggcggcggccgcgggccctccatc 414 |||||||||||||||||| |||||| Sbjct: 47334 cggcggcggccgcgggccgtccatc 47310
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tgggcgggctgagccgggcgt 325 ||||||||||||||||||||| Sbjct: 74433 tgggcgggctgagccgggcgt 74413
>dbj|AK122096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125D04, full insert sequence Length = 3733 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 390 cggcggcggccgcgggccctccatc 414 |||||||||||||||||| |||||| Sbjct: 674 cggcggcggccgcgggccgtccatc 650
>dbj|AK102726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105M03, full insert sequence Length = 938 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tgggcgggctgagccgggcgt 325 ||||||||||||||||||||| Sbjct: 434 tgggcgggctgagccgggcgt 454
>dbj|AK069570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025A03, full insert sequence Length = 889 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tgggcgggctgagccgggcgt 325 ||||||||||||||||||||| Sbjct: 431 tgggcgggctgagccgggcgt 451
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 cggcgctgctgctcgcgctgg 250 ||||||||||||||||||||| Sbjct: 1941643 cggcgctgctgctcgcgctgg 1941623
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 gggcatggccaccggcggcgg 398 ||||||||||||||||||||| Sbjct: 50032 gggcatggccaccggcggcgg 50012
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ggcgctgctgctcgcgctggt 251 ||||||||||||||||||||| Sbjct: 393787 ggcgctgctgctcgcgctggt 393807
>ref|NM_197239.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0062C05.14), mRNA Length = 303 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 140 tcttcgggacggcgccgtcggcgt 163
>ref|NM_197242.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0062C05.16), mRNA Length = 306 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 143 tcttcgggacggcgccgtcggcgt 166
>ref|NM_197241.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0062C05.15), mRNA Length = 303 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 140 tcttcgggacggcgccgtcggcgt 163
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 82637 tcttcgggacggcgccgtcggcgt 82660 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 78390 tcttcgggacggcgccgtcggcgt 78367 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 66819 tcttcgggacggcgccgtcggcgt 66796
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 102373 cttccccgagggcttcgtcttcgg 102350 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 92382 cttccccgagggcttcgtcttcgg 92359
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 29343 gccaccggcggcggccgcgg 29362
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ggccgcgggccctccatctgggac 420 |||||||| ||||||||||||||| Sbjct: 558741 ggccgcggcccctccatctgggac 558764
>ref|XM_653324.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0812.2), mRNA Length = 2442 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 ggccgcgggccctccatctgggac 420 ||||||||||| |||||||||||| Sbjct: 1084 ggccgcgggccttccatctgggac 1107
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 cggcgctgctgctcgcgctg 249 |||||||||||||||||||| Sbjct: 1264447 cggcgctgctgctcgcgctg 1264428
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ggccgcgcccacgaccgctgccac 49 |||||||||||||||||| ||||| Sbjct: 654750 ggccgcgcccacgaccgccgccac 654727
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gcgctgctgctcgcgctggt 251 |||||||||||||||||||| Sbjct: 428295 gcgctgctgctcgcgctggt 428314
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacggcgacgtcggcgtaccaggt 374 ||||||| |||| ||| ||||||||||||| ||||| |||| ||||| Sbjct: 63522 cttccccgaggggttcatcttcgggacggcctcgtcgtcgtatcaggt 63475 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacggcgacgtcggcgtaccaggt 374 |||||||||||| ||| |||||||||| || ||||| |||| ||||| Sbjct: 48865 cttccccaaggggttcatcttcgggacagcctcgtcgtcgtatcaggt 48818 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacg 354 |||||||||||| ||| ||||||||||| Sbjct: 17812 cttccccaaggggttcatcttcgggacg 17785
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 accaggtggagggcatggcc 387 |||||||||||||||||||| Sbjct: 649214 accaggtggagggcatggcc 649233
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacggcgacgtcggcgtaccaggt 374 ||||||| |||| ||| ||||||||||||| ||||| |||| ||||| Sbjct: 23742610 cttccccgaggggttcatcttcgggacggcctcgtcgtcgtatcaggt 23742563 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacggcgacgtcggcgtaccaggt 374 |||||||||||| ||| |||||||||| || ||||| |||| ||||| Sbjct: 23727953 cttccccaaggggttcatcttcgggacagcctcgtcgtcgtatcaggt 23727906 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgggacg 354 |||||||||||| ||| ||||||||||| Sbjct: 23696900 cttccccaaggggttcatcttcgggacg 23696873
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18787216 tcttcgggacggcgccgtcggcgt 18787239 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18782969 tcttcgggacggcgccgtcggcgt 18782946 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18771398 tcttcgggacggcgccgtcggcgt 18771375
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 19702076 gccaccggcggcggccgcgg 19702095 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 19619298 cttccccgagggcttcgtcttcgg 19619275 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 19609307 cttccccgagggcttcgtcttcgg 19609284
>emb|BX284614.8| Zebrafish DNA sequence from clone CH211-140G18 in linkage group 25, complete sequence Length = 160828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 taggttggtcggtcggtcgg 209 |||||||||||||||||||| Sbjct: 51055 taggttggtcggtcggtcgg 51074
>emb|BX470227.9| Zebrafish DNA sequence from clone CH211-12D10 in linkage group 13, complete sequence Length = 177716 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 taggttggtcggtcggtcgg 209 |||||||||||||||||||| Sbjct: 43587 taggttggtcggtcggtcgg 43568
>gb|AY227005.1| Streptomyces caeruleus probable secreted peptidase, probable oxidoreductase, and marR-family regulator-like protein genes, complete cds Length = 6339 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gaagagcgcgccgctgctct 77 |||||||||||||||||||| Sbjct: 2827 gaagagcgcgccgctgctct 2846
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctgggcgggctgagccggg 322 |||||||||||||||||||| Sbjct: 1546468 gctgggcgggctgagccggg 1546449
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 47762 gccaccggcggcggccgcgg 47781
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 28780 cttccccgagggcttcgtcttcgg 28757 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 18789 cttccccgagggcttcgtcttcgg 18766
>gb|AY130257.1| Thermus sp. IB-21 clone tib2 beta-glycosidase gene, complete cds Length = 1634 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 403 gggccctccatctgggacgcgttcgccc 430 ||||| |||||||||||||| ||||||| Sbjct: 395 gggccttccatctgggacgccttcgccc 422
>dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B10, full insert sequence Length = 2126 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 113 cttccccgagggcttcgtcttcgg 136
>dbj|AK099033.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L11, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 84 gccaccggcggcggccgcgg 103
>dbj|AK071999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094N11, full insert sequence Length = 1466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gccaccggcggcggccgcgg 404 |||||||||||||||||||| Sbjct: 143 gccaccggcggcggccgcgg 162
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 acgtcggcgtaccaggtggagggc 381 |||||||||||| ||||||||||| Sbjct: 1928956 acgtcggcgtacaaggtggagggc 1928933
>emb|AL391833.10| Human DNA sequence from clone RP11-307K1 on chromosome 6, complete sequence Length = 201512 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccaggtggagggcatggcca 388 |||||||||||||||||||| Sbjct: 21868 ccaggtggagggcatggcca 21887
>dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092D04, full insert sequence Length = 3403 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 327 cttccccaagggcttcgtcttcgggacg 354 |||||||||||| ||| ||||||||||| Sbjct: 164 cttccccaaggggttcatcttcgggacg 191
>dbj|AK066336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O11, full insert sequence Length = 1919 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 cttccccaagggcttcgtcttcgg 350 ||||||| |||||||||||||||| Sbjct: 120 cttccccgagggcttcgtcttcgg 143
>dbj|AK063117.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E03, full insert sequence Length = 485 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 159 tcttcgggacggcgccgtcggcgt 182
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccaggtggagggcatggcca 388 |||||||||||||||||||| Sbjct: 2079714 ccaggtggagggcatggcca 2079733
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18798070 tcttcgggacggcgccgtcggcgt 18798093 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18793823 tcttcgggacggcgccgtcggcgt 18793800 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcttcgggacggcgacgtcggcgt 367 |||||||||||||| ||||||||| Sbjct: 18782252 tcttcgggacggcgccgtcggcgt 18782229
>dbj|AP001576.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1F5 Length = 105199 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccaggtggagggcatggcca 388 |||||||||||||||||||| Sbjct: 80387 ccaggtggagggcatggcca 80368 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,568,016 Number of Sequences: 3902068 Number of extensions: 2568016 Number of successful extensions: 67119 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64754 Number of HSP's gapped (non-prelim): 2341 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
