ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_680322.1| PREDICTED: Danio rerio similar to hyperpolarization-activated cation channel, HAC1 (LOC557285), mRNA Length = 2940 Score = 44.1 bits (22), Expect = 0.092 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccgcgg 111 |||||||||||||||||||||| Sbjct: 382 gccgccgccgctcctcccgcgg 403
>emb|BX664631.6| Zebrafish DNA sequence from clone DKEY-28H18 in linkage group 22, complete sequence Length = 220242 Score = 44.1 bits (22), Expect = 0.092 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcgg 111 |||||||||||||||||||||| Sbjct: 34271 gccgccgccgctcctcccgcgg 34250
>ref|XM_475622.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3093 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 115 gccgccgccgctcctcccgcg 95
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 41774 gccgccgccgctcctcccgcg 41754
>ref|XM_329543.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B11B22.30 [imported] - Neurospora crassa OR74A ) (NCU08499.1) partial mRNA Length = 2856 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctcc 106 ||||||||||||||||||||| Sbjct: 705 cgctgccgccgccgctcctcc 725
>ref|XM_956905.1| Neurospora crassa OR74A hypothetical protein (NCU08811.1) partial mRNA Length = 1491 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 1097 gccgccgccgctcctcccgcg 1077
>ref|XM_958335.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B11B22.30 [imported] - Neurospora crassa OR74A ) (NCU08499.1) partial mRNA Length = 2856 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctcc 106 ||||||||||||||||||||| Sbjct: 705 cgctgccgccgccgctcctcc 725
>ref|XM_330927.1| Neurospora crassa OR74A hypothetical protein (NCU08811.1) partial mRNA Length = 1491 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 1097 gccgccgccgctcctcccgcg 1077
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 gacatggacgacttcatgcag 50 ||||||||||||||||||||| Sbjct: 744782 gacatggacgacttcatgcag 744802
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctcc 106 ||||||||||||||||||||| Sbjct: 20350 cgctgccgccgccgctcctcc 20370
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcc 106 ||||||||||||||||||||| Sbjct: 23690 cgctgccgccgccgctcctcc 23670
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 3412292 gccgccgccgctcctcccgcg 3412272 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 26731182 gccgccgccgctcctcccgc 26731163 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 27729238 ccgccgccgctcctcccgc 27729220 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 23139607 gccgccgccgctcctcccg 23139625 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||||||||| ||||| Sbjct: 12553015 gctgccgccgccgctccgcccgc 12552993
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 accacgctgccgccgccgctc 102 ||||||||||||||||||||| Sbjct: 20778064 accacgctgccgccgccgctc 20778044 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcctccc 107 ||||| |||||||||||||||||| Sbjct: 40281095 cacgccgccgccgccgctcctccc 40281072 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccgccgccgctcctcccgcg 110 |||||||||||||||||||| Sbjct: 8598187 ccgccgccgctcctcccgcg 8598206 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 28233703 tgccgccgccgctcctccc 28233685 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 24888400 tgccgccgccgctcctccc 24888382 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 20030842 gctgccgccgccgctcctc 20030860
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 accacgctgccgccgccgctc 102 ||||||||||||||||||||| Sbjct: 121022 accacgctgccgccgccgctc 121002
>dbj|AK065411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N10, full insert sequence Length = 3729 Score = 42.1 bits (21), Expect = 0.37 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgcg 110 ||||||||||||||||||||| Sbjct: 269 gccgccgccgctcctcccgcg 249
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 112179 gccgccgccgctcctcccgc 112160
>ref|XM_475823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 336 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 279 gccgccgccgctcctcccgc 260
>ref|XM_467924.1| Oryza sativa (japonica cultivar-group), mRNA Length = 345 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctc 105 |||||||||||||||||||| Sbjct: 121 cgctgccgccgccgctcctc 140
>ref|XM_467438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 390 cacgctgccgccgccgctcc 409
>gb|DQ214868.1| Taeniopygia guttata clone 0058P0030E07 ribosomal protein L26 variant 2-like mRNA, complete sequence Length = 534 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 |||||||||||||||||| ||||| Sbjct: 34 cgctgccgccgccgctccgcccgc 11
>gb|DQ214865.1| Taeniopygia guttata clone 0061P0014H12 ribosomal protein L26 variant 2-like mRNA, complete sequence Length = 534 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 |||||||||||||||||| ||||| Sbjct: 34 cgctgccgccgccgctccgcccgc 11
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 13121 gccgccgccgctcctcccgc 13102
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 99965 gccgccgccgctcctcccgc 99946
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 128330 gccgccgccgctcctcccgc 128349
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 133184 gccgccgccgctcctcccgc 133165
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 98157 gccgccgccgctcctcccgc 98138
>gb|BC112607.1| Bos taurus similar to CG13585-PA, isoform A, transcript variant 1, mRNA (cDNA clone MGC:137234 IMAGE:8019980), complete cds Length = 1169 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctc 105 |||||||||||||||||||| Sbjct: 20 cgctgccgccgccgctcctc 1
>gb|AF539403.1| Bos taurus EP4 receptor mRNA, complete cds Length = 2829 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 agcagcagtaccacgctgccgccgccgc 100 |||||||| ||||||| ||||||||||| Sbjct: 682 agcagcagcaccacgcggccgccgccgc 709
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 33854 cacgctgccgccgccgctcc 33835
>gb|AC109440.2| Homo sapiens chromosome 5 clone CTB-26A17, complete sequence Length = 79884 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 agaagagatctgaagccaggggtc 25 ||||||||||||||| |||||||| Sbjct: 57722 agaagagatctgaagtcaggggtc 57745
>gb|AC010453.5| Homo sapiens chromosome 5 clone CTD-2248K2, complete sequence Length = 88588 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 agaagagatctgaagccaggggtc 25 ||||||||||||||| |||||||| Sbjct: 66453 agaagagatctgaagtcaggggtc 66476
>gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, complete sequence Length = 191308 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 agaagagatctgaagccaggggtc 25 ||||||||||||||| |||||||| Sbjct: 7172 agaagagatctgaagtcaggggtc 7195
>ref|NM_174589.2| Bos taurus prostaglandin E receptor 4 (subtype EP4) (PTGER4), mRNA Length = 2829 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 agcagcagtaccacgctgccgccgccgc 100 |||||||| ||||||| ||||||||||| Sbjct: 682 agcagcagcaccacgcggccgccgccgc 709
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cttcatgcagtgggcgatgaacac 64 ||||||||||||||||||| |||| Sbjct: 27124851 cttcatgcagtgggcgatggacac 27124874 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 24077922 tgccgccgccgctcctccc 24077904 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 cgctcctcccgcggcggcc 116 ||||||||||||||||||| Sbjct: 21447922 cgctcctcccgcggcggcc 21447904 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 cgctcctcccgcggcggcc 116 ||||||||||||||||||| Sbjct: 21430769 cgctcctcccgcggcggcc 21430751 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 898672 tgccgccgccgctcctccc 898690
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 16154965 cacgctgccgccgccgctcc 16154946
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 21409976 gccgccgccgctcctcccgc 21409995 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 15207565 ccacgctgccgccgccgct 15207547 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 12440375 ctgccgccgccgctcctcc 12440357
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcc 106 |||||||||||||||||||| Sbjct: 27888417 gctgccgccgccgctcctcc 27888398 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 ||||||||||||| |||||||||| Sbjct: 19663260 cgctgccgccgcccctcctcccgc 19663237 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcg 110 ||||||||||||||||||| Sbjct: 26671068 cgccgccgctcctcccgcg 26671050 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 13259506 ccacgctgccgccgccgct 13259488 Score = 38.2 bits (19), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 83 ccacgctgccgccgccgctcctcccgc 109 |||||||| || ||||||||||||||| Sbjct: 10209203 ccacgctgacgacgccgctcctcccgc 10209229
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctc 105 |||||||||||||||||||| Sbjct: 32105902 cgctgccgccgccgctcctc 32105921 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 29517016 cacgctgccgccgccgctcc 29516997 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 25559436 ctgccgccgccgctcctcc 25559454 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 cacgctgccgccgccgctc 102 ||||||||||||||||||| Sbjct: 1647856 cacgctgccgccgccgctc 1647874
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcctccc 107 ||||| |||||||||||||||||| Sbjct: 146873 cacgccgccgccgccgctcctccc 146850
>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0462H08 Length = 139152 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccgccgccgctcctcccgcg 110 |||||||||||||||||||| Sbjct: 30382 ccgccgccgctcctcccgcg 30401
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 112046 cacgctgccgccgccgctcc 112027
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccgc 109 |||||||||||||||||||| Sbjct: 27081 gccgccgccgctcctcccgc 27100
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 ||||||||||||| |||||||||| Sbjct: 144992 cgctgccgccgcccctcctcccgc 144969
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 ||||||||||||| |||||||||| Sbjct: 47716 cgctgccgccgcccctcctcccgc 47693
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcc 106 |||||||||||||||||||| Sbjct: 42340 gctgccgccgccgctcctcc 42321
>emb|BX682227.3| Mouse DNA sequence from clone RP23-190N2 on chromosome X, complete sequence Length = 76641 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 agagatctgaagccaggggt 24 |||||||||||||||||||| Sbjct: 41726 agagatctgaagccaggggt 41745
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0486G03 Length = 146713 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcctc 105 |||||||||||||||||||| Sbjct: 42558 cgctgccgccgccgctcctc 42577
>dbj|AK120650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156M02, full insert sequence Length = 1512 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 ||||||||||||| |||||||||| Sbjct: 554 cgctgccgccgcccctcctcccgc 531
>dbj|AK108739.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E02, full insert sequence Length = 1455 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcctcccgc 109 ||||||||||||| |||||||||| Sbjct: 511 cgctgccgccgcccctcctcccgc 488
>dbj|AK073920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073E09, full insert sequence Length = 2320 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgcg 110 |||||||||||||||||||| Sbjct: 263 ccgccgccgctcctcccgcg 244
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctcc 103 |||||||||||||||||||| Sbjct: 16163206 cacgctgccgccgccgctcc 16163187
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cttcatgcagtgggcgatgaacac 64 ||||||||||||||||||| |||| Sbjct: 27050448 cttcatgcagtgggcgatggacac 27050471 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 24006128 tgccgccgccgctcctccc 24006110 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 cgctcctcccgcggcggcc 116 ||||||||||||||||||| Sbjct: 21376243 cgctcctcccgcggcggcc 21376225 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 cgctcctcccgcggcggcc 116 ||||||||||||||||||| Sbjct: 21359090 cgctcctcccgcggcggcc 21359072 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 898672 tgccgccgccgctcctccc 898690
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 cttcatgcagtgggcgatgaacac 64 ||||||||||||||||||| |||| Sbjct: 31386 cttcatgcagtgggcgatggacac 31363
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 40.1 bits (20), Expect = 1.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cttcatgcagtgggcgatgaacac 64 ||||||||||||||||||| |||| Sbjct: 63747 cttcatgcagtgggcgatggacac 63770
>ref|NM_128329.1| Arabidopsis thaliana GTP binding / translation factor, nucleic acid binding AT2G27700 mRNA, complete cds Length = 1440 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ggcgatgaacactctagac 71 ||||||||||||||||||| Sbjct: 55 ggcgatgaacactctagac 73
>ref|NM_128276.2| Arabidopsis thaliana unknown protein AT2G27180 mRNA, complete cds Length = 942 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 379 ccgccgccgctcctcccgc 361
>gb|AY789531.1| Oryza sativa (indica cultivar-group) prenylated Rab acceptor protein 1 (Pra1) mRNA, complete cds Length = 960 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 90 gccgccgccgctcctcccg 108
>ref|XM_483206.1| Oryza sativa (japonica cultivar-group), mRNA Length = 420 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 252 gccgccgccgctcctcccg 270
>ref|XM_466942.1| Oryza sativa (japonica cultivar-group), mRNA Length = 300 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 260 ctgccgccgccgctcctcc 242
>gb|DQ216573.1| Taeniopygia guttata clone 0058P0057D12 nucleic acid binding protein RY-1 variant 5-like mRNA, complete sequence Length = 855 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcggcgg 114 |||||||||| |||||||||||| Sbjct: 114 cgccgccgctgctcccgcggcgg 92
>gb|DQ216572.1| Taeniopygia guttata clone 0061P0021F12 nucleic acid binding protein RY-1 variant 5-like mRNA, complete sequence Length = 899 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcggcgg 114 |||||||||| |||||||||||| Sbjct: 145 cgccgccgctgctcccgcggcgg 123
>gb|DQ214660.1| Taeniopygia guttata clone 0058P0021H05 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1174 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 244 ccgctcctcccgcggcggc 226
>gb|DQ214659.1| Taeniopygia guttata clone 0063P0003D08 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1173 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 244 ccgctcctcccgcggcggc 226
>gb|DQ214658.1| Taeniopygia guttata clone 0058P0010C05 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1174 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 244 ccgctcctcccgcggcggc 226
>gb|DQ214657.1| Taeniopygia guttata clone 0058P0047F09 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1174 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 244 ccgctcctcccgcggcggc 226
>gb|DQ214656.1| Taeniopygia guttata clone 0062P0002G10 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1170 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 241 ccgctcctcccgcggcggc 223
>gb|DQ214655.1| Taeniopygia guttata clone 0061P0015H03 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1126 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 198 ccgctcctcccgcggcggc 180
>gb|DQ214654.1| Taeniopygia guttata clone 0058P0031C06 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1134 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 205 ccgctcctcccgcggcggc 187
>gb|DQ214653.1| Taeniopygia guttata clone 0058P0014B10 growth factor receptor-bound protein 2-like mRNA, complete sequence Length = 1174 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 232 ccgctcctcccgcggcggc 214
>ref|XM_464008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctc 102 ||||||||||||||||||| Sbjct: 300 cacgctgccgccgccgctc 282
>ref|NM_192083.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 380 tgccgccgccgctcctccc 362
>ref|NM_192868.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 143 tgccgccgccgctcctccc 161
>ref|NM_193309.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 549 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 489 gctgccgccgccgctcctc 507
>ref|XM_469399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 564 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 acgctgccgccgccgctcctccc 107 |||||||||||||||| |||||| Sbjct: 162 acgctgccgccgccgcacctccc 140
>ref|XM_478936.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 144 ccgctcctcccgcggcggc 162
>ref|NM_021599.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 2 (ADAMTS2), transcript variant 2, mRNA Length = 1701 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctcccgc 109 |||||||||||||||||| |||| Sbjct: 66 gctgccgccgccgctcctgccgc 88
>ref|NM_014244.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 2 (ADAMTS2), transcript variant 1, mRNA Length = 3636 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctcccgc 109 |||||||||||||||||| |||| Sbjct: 66 gctgccgccgccgctcctgccgc 88
>ref|XM_472330.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 576 gccgccgccgctcctcccg 594
>gb|BC005895.1| Homo sapiens COX11 homolog, cytochrome c oxidase assembly protein (yeast), mRNA (cDNA clone MGC:14469 IMAGE:4282744), complete cds Length = 1629 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 283 ctgccgccgccgctcctcc 265
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 71382 gccgccgccgctcctcccg 71400
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 93796 ccgccgccgctcctcccgc 93778
>ref|XM_591786.2| PREDICTED: Bos taurus similar to Protein phosphatase 2C delta isoform (PP2C-delta) (p53-induced protein phosphatase 1) (Protein phosphatase magnesium-dependent 1 delta) (LOC514005), mRNA Length = 3012 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 272 gctgccgccgccgctcctc 290
>gb|BC057039.1| Mus musculus scaffold attachment factor B2, mRNA (cDNA clone IMAGE:6815648) Length = 2540 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||| ||||||||||| Sbjct: 1541 gctgccgccgcagctcctcccgc 1519
>gb|BC050855.1| Mus musculus scaffold attachment factor B2, mRNA (cDNA clone IMAGE:6333217), partial cds Length = 3233 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||| ||||||||||| Sbjct: 2345 gctgccgccgcagctcctcccgc 2323
>gb|BC027837.1| Mus musculus scaffold attachment factor B2, mRNA (cDNA clone IMAGE:5323830), with apparent retained intron Length = 1255 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||| ||||||||||| Sbjct: 377 gctgccgccgcagctcctcccgc 355
>gb|BC028827.1| Mus musculus scaffold attachment factor B2, mRNA (cDNA clone IMAGE:5099281), partial cds Length = 2002 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||| ||||||||||| Sbjct: 1125 gctgccgccgcagctcctcccgc 1103
>ref|XM_581038.2| PREDICTED: Bos taurus similar to Afadin (Af-6 protein) (LOC504856), mRNA Length = 5241 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 4630 gctgccgccgccgctcctc 4612
>ref|XM_876447.1| PREDICTED: Bos taurus similar to CG13585-PA, isoform A, transcript variant 2 (LOC614774), mRNA Length = 1118 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcct 104 ||||||||||||||||||| Sbjct: 120 cgctgccgccgccgctcct 102
>ref|XM_865570.1| PREDICTED: Bos taurus similar to CG13585-PA, isoform A, transcript variant 1 (LOC614774), mRNA Length = 1343 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 cgctgccgccgccgctcct 104 ||||||||||||||||||| Sbjct: 202 cgctgccgccgccgctcct 184
>ref|XM_424510.1| PREDICTED: Gallus gallus similar to basic helix-loop-helix protein NSCL1 (LOC426904), mRNA Length = 2162 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 484 gccgccgccgctcctcccg 466
>ref|XM_870885.1| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 7B, cardiac muscle, beta (LOC521764), mRNA Length = 6475 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 5064 ctgccgccgccgctcctcc 5046
>ref|NM_001029979.1| Mus musculus scaffold attachment factor B2 (Safb2), mRNA Length = 3351 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||| ||||||||||| Sbjct: 2488 gctgccgccgcagctcctcccgc 2466
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 cacgctgccgccgccgctc 102 ||||||||||||||||||| Sbjct: 2382909 cacgctgccgccgccgctc 2382927
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 accacgctgccgccgccgc 100 ||||||||||||||||||| Sbjct: 3135687 accacgctgccgccgccgc 3135705
>ref|NM_004375.2| Homo sapiens COX11 homolog, cytochrome c oxidase assembly protein (yeast) (COX11), nuclear gene encoding mitochondrial protein, mRNA Length = 2717 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 320 ctgccgccgccgctcctcc 302
>gb|AC137746.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0030J05, complete sequence Length = 147352 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 gctgccgccgccgctcctcccgc 109 ||||||||||||||||| ||||| Sbjct: 51863 gctgccgccgccgctccgcccgc 51841
>gb|AF393850.1| Gallus gallus basic helix-loop-helix protein NSCL1 mRNA, complete cds Length = 2316 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 594 gccgccgccgctcctcccg 576
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 85 acgctgccgccgccgctcctccc 107 |||||||||||||||| |||||| Sbjct: 27753302 acgctgccgccgccgcacctccc 27753324
>gb|AY144298.1| Uncultured Planctomyces sp. LTUP07056 16S ribosomal RNA gene, partial sequence Length = 449 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 gccgctcctcccgcggcgg 114 ||||||||||||||||||| Sbjct: 164 gccgctcctcccgcggcgg 146
>gb|AY144297.1| Uncultured Planctomyces sp. LTUP05356 16S ribosomal RNA gene, partial sequence Length = 449 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 gccgctcctcccgcggcgg 114 ||||||||||||||||||| Sbjct: 164 gccgctcctcccgcggcgg 146
>gb|AY230321.1| Triticum aestivum FCA beta-A3 isoform (Fca) mRNA, partial sequence; alternatively spliced Length = 781 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 154 ccgctcctcccgcggcggc 172
>ref|XM_847666.1| PREDICTED: Canis familiaris similar to Protein phosphatase 2C delta isoform (PP2C-delta) (p53-induced protein phosphatase 1) (Protein phosphatase magnesium-dependent 1 delta) (LOC612934), mRNA Length = 2597 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 644 gctgccgccgccgctcctc 662
>gb|AC109479.3| Homo sapiens chromosome 5 clone RP11-443C10, complete sequence Length = 183734 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctcccgc 109 |||||||||||||||||| |||| Sbjct: 72736 gctgccgccgccgctcctgccgc 72758
>gb|DQ446572.1| Arabidopsis thaliana clone pENTR221-At2g27700 eukaryotic translation initiation factor 2 family protein/eIF-2 family protein (At2g27700) mRNA, complete cds Length = 1440 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ggcgatgaacactctagac 71 ||||||||||||||||||| Sbjct: 55 ggcgatgaacactctagac 73
>ref|XM_967079.1| PREDICTED: Tribolium castaneum similar to CG1869-PA (LOC660881), mRNA Length = 3006 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 ggtcggtcgacatggacgacttc 44 ||||||| ||||||||||||||| Sbjct: 2633 ggtcggtggacatggacgacttc 2655
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 cgccgccgctcctcccgcg 110 ||||||||||||||||||| Sbjct: 1265754 cgccgccgctcctcccgcg 1265772
>emb|CR541837.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0932D for gene COX11, COX11 homolog, cytochrome c oxidase assembly protein (yeast); complete cds, without stopcodon Length = 828 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 273 ctgccgccgccgctcctcc 255
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 cacgctgccgccgccgctc 102 ||||||||||||||||||| Sbjct: 2001656 cacgctgccgccgccgctc 2001638
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 catgcagtgggcgatgaac 62 ||||||||||||||||||| Sbjct: 1243911 catgcagtgggcgatgaac 1243893
>emb|AL831789.6| Zebrafish DNA sequence from clone CH211-207O21 in linkage group 14 Contains the zebrafish fgf24 gene for fibroblast growth factor 24, a novel gene for a RING finger protein, the lbx1h gene for lady bird-like homeobox 1 homolog, (Drosophila) and eight CpG islands, complete sequence Length = 217649 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgaacactctagaccagc 75 ||||||||||||||||||| Sbjct: 60282 atgaacactctagaccagc 60300
>emb|AJ003125.1|HSAJ3125 Homo sapiens mRNA for procollagen I-N proteinase Length = 3636 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctcccgc 109 |||||||||||||||||| |||| Sbjct: 66 gctgccgccgccgctcctgccgc 88
>gb|BT008578.1| Arabidopsis thaliana clone U50190 unknown protein (At2g27180) mRNA, complete cds Length = 529 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 139 ccgccgccgctcctcccgc 121
>gb|DQ285630.1| Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes, complete cds; putative NBS-LRR disease resistance protein (Nbs4-Pi9) pseudogene, complete sequence; putative NBS-LRR disease resistance protein (Nbs5-Pi9) gene, complete cds; putative NBS-LRR disease resistance protein (Nbs6-Pi9) gene, partial cds; and solo-long terminal repeat retrotransposon, complete sequence Length = 76272 Score = 38.2 bits (19), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 83 ccacgctgccgccgccgctcctcccgc 109 |||||||| || ||||||||||||||| Sbjct: 3675 ccacgctgacgacgccgctcctcccgc 3701
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 taccacgctgccgccgccg 99 ||||||||||||||||||| Sbjct: 1032199 taccacgctgccgccgccg 1032217
>emb|CR625857.1| full-length cDNA clone CS0DI041YH10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1572 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 264 ctgccgccgccgctcctcc 246
>emb|CR620872.1| full-length cDNA clone CS0DH001YJ09 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1588 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 270 ctgccgccgccgctcctcc 252
>emb|CR617036.1| full-length cDNA clone CS0DJ004YE11 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1581 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 264 ctgccgccgccgctcctcc 246
>emb|CR600874.1| full-length cDNA clone CS0DB002YE15 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1590 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 255 ctgccgccgccgctcctcc 237
>gb|AC007290.6| Arabidopsis thaliana chromosome 2 clone T22O13 map B68, complete sequence Length = 30219 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 20654 ccgccgccgctcctcccgc 20672
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ggcgatgaacactctagac 71 ||||||||||||||||||| Sbjct: 63729 ggcgatgaacactctagac 63747
>gb|AC008544.7| Homo sapiens chromosome 5 clone CTC-500G13, complete sequence Length = 168008 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctcccgc 109 |||||||||||||||||| |||| Sbjct: 6259 gctgccgccgccgctcctgccgc 6281
>gb|AC025505.11| Homo sapiens, clone RP11-651N3, complete sequence Length = 166426 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 137823 ctgccgccgccgctcctcc 137841
>gb|AC007485.10| Homo sapiens chromosome 17, clone RP11-257O5, complete sequence Length = 164731 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 24222 ctgccgccgccgctcctcc 24240
>gb|BT006186.1| Arabidopsis thaliana clone RAFL15-46-M05 (R50190) unknown protein (At2g27180) mRNA, complete cds Length = 967 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 354 ccgccgccgctcctcccgc 336
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcggcgg 114 |||||||||||||| |||||||| Sbjct: 4991840 cgccgccgctcctcgcgcggcgg 4991818
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 19573370 gccgccgccgctcctcccg 19573388
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 24810825 gccgccgccgctcctcccg 24810843
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 23899968 ccgctcctcccgcggcggc 23899986
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 85 acgctgccgccgccgctcctccc 107 |||||||||||||||| |||||| Sbjct: 27844625 acgctgccgccgccgcacctccc 27844647
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 94015 gccgccgccgctcctcccg 94033
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 133751 gctgccgccgccgctcctc 133769
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 28804 gctgccgccgccgctcctc 28822
>gb|AY072284.1| Spodoptera frugiperda 60S acidic ribosomal protein P0 mRNA, complete cds Length = 1062 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 cgctgccgccgccgctcct 104 ||||||||||||||||||| Sbjct: 910 cgctgccgccgccgctcct 928
>ref|NM_204121.1| Gallus gallus nescient helix loop helix 1 (NHLH1), mRNA Length = 2316 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 594 gccgccgccgctcctcccg 576
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 38.2 bits (19), Expect = 5.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 85 acgctgccgccgccgctcctccc 107 |||||||||||||||| |||||| Sbjct: 60592 acgctgccgccgccgcacctccc 60570
>gb|AY183042.1| Trifolium repens clone ca828 microsatellite sequence Length = 419 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 104 gctgccgccgccgctcctc 122
>gb|AY088710.1| Arabidopsis thaliana clone 9248 mRNA, complete sequence Length = 868 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 ccgccgccgctcctcccgc 109 ||||||||||||||||||| Sbjct: 379 ccgccgccgctcctcccgc 361
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 68210 tgccgccgccgctcctccc 68192
>dbj|AP003347.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445E10 Length = 145912 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 117697 tgccgccgccgctcctccc 117679
>gb|AY178361.1| Trifolium repens microsatellite agr1078 sequence Length = 418 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 104 gctgccgccgccgctcctc 122
>gb|AF086757.1|AF086757 Gallus gallus basic helix-loop-helix protein NSCL1 mRNA, complete cds Length = 1135 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 648 gccgccgccgctcctcccg 630
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 54895 ccgctcctcccgcggcggc 54913
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 111626 gccgccgccgctcctcccg 111644
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 gctcctcccgcggcggccc 117 ||||||||||||||||||| Sbjct: 683177 gctcctcccgcggcggccc 683159
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 cacgctgccgccgccgctc 102 ||||||||||||||||||| Sbjct: 84959 cacgctgccgccgccgctc 84977
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 38.2 bits (19), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 83 ccacgctgccgccgccgctcctcccgc 109 |||||||| || ||||||||||||||| Sbjct: 188474 ccacgctgacgacgccgctcctcccgc 188500
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 38.2 bits (19), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 83 ccacgctgccgccgccgctcctcccgc 109 |||||||| || ||||||||||||||| Sbjct: 13430 ccacgctgacgacgccgctcctcccgc 13456
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 21316 ccacgctgccgccgccgct 21298
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 111520 tgccgccgccgctcctccc 111502
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcg 110 ||||||||||||||||||| Sbjct: 28531 cgccgccgctcctcccgcg 28513
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 cgccgccgctcctcccgcg 110 ||||||||||||||||||| Sbjct: 87498 cgccgccgctcctcccgcg 87480
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 101541 ccacgctgccgccgccgct 101523
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 ccgctcctcccgcggcggc 115 ||||||||||||||||||| Sbjct: 88468 ccgctcctcccgcggcggc 88486
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 29483 ctgccgccgccgctcctcc 29501
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 50835 ctgccgccgccgctcctcc 50853
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 105959 ctgccgccgccgctcctcc 105941
>gb|AY888497.1| Synthetic construct Homo sapiens clone FLH009215.01X COX11-like cytochrome c oxidase assembly protein (COX11) mRNA, complete cds Length = 831 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 273 ctgccgccgccgctcctcc 255
>gb|AY891144.1| Synthetic construct Homo sapiens clone FLH009212.01L COX11-like cytochrome c oxidase assembly protein (COX11) mRNA, partial cds Length = 831 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 273 ctgccgccgccgctcctcc 255
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 15271 gccgccgccgctcctcccg 15289
>emb|X81956.1|PSP16S668 Planctomyces sp. partial 16S rRNA gene (Schlesner 668) Length = 1478 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 gccgctcctcccgcggcgg 114 ||||||||||||||||||| Sbjct: 193 gccgctcctcccgcggcgg 175
>emb|X81955.1|PSP16S664 Planctomyces sp. partial 16S rRNA gene (Schlesner 664) Length = 1469 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 gccgctcctcccgcggcgg 114 ||||||||||||||||||| Sbjct: 191 gccgctcctcccgcggcgg 173
>dbj|AK110526.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H10, full insert sequence Length = 847 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 gctgccgccgccgctcctc 105 ||||||||||||||||||| Sbjct: 573 gctgccgccgccgctcctc 591
>dbj|AK109666.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A04, full insert sequence Length = 1340 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 237 tgccgccgccgctcctccc 219
>gb|AY893741.1| Synthetic construct Homo sapiens clone FLH130922.01L COX11-like cytochrome c oxidase assembly protein (COX11) mRNA, partial cds Length = 831 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 273 ctgccgccgccgctcctcc 255
>dbj|AK106175.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C07, full insert sequence Length = 985 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 112 gccgccgccgctcctcccg 130
>gb|AY893289.1| Synthetic construct Homo sapiens clone FLH130954.01X COX11-like cytochrome c oxidase assembly protein (COX11) mRNA, complete cds Length = 831 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 273 ctgccgccgccgctcctcc 255
>dbj|AK104118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A05, full insert sequence Length = 986 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 113 gccgccgccgctcctcccg 131
>dbj|AK072260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B09, full insert sequence Length = 3633 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 2070 ccacgctgccgccgccgct 2052
>dbj|AK060006.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B06, full insert sequence Length = 1097 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 121 gccgccgccgctcctcccg 139
>gb|AY106347.1| Zea mays PCO092382 mRNA sequence Length = 1513 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 170 ctgccgccgccgctcctcc 152
>gb|AF044321.1|AF044321 Homo sapiens cytochrome c oxidase assembly protein COX11 (COX11) mRNA, complete cds Length = 2676 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctgccgccgccgctcctcc 106 ||||||||||||||||||| Sbjct: 288 ctgccgccgccgctcctcc 270
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ccacgctgccgccgccgct 101 ||||||||||||||||||| Sbjct: 13064 ccacgctgccgccgccgct 13046
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gccgccgccgctcctcccg 108 ||||||||||||||||||| Sbjct: 24096 gccgccgccgctcctcccg 24114
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 9474 tgccgccgccgctcctccc 9492
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tgccgccgccgctcctccc 107 ||||||||||||||||||| Sbjct: 36257 tgccgccgccgctcctccc 36275
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 gctcctcccgcggcggccc 117 ||||||||||||||||||| Sbjct: 353816 gctcctcccgcggcggccc 353798
>gb|U64032.1|OCU64032 Oryctolagus cuniculus alpha 1d adrenoceptor mRNA, complete cds Length = 1731 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 accacgctgccgccgccgc 100 ||||||||||||||||||| Sbjct: 185 accacgctgccgccgccgc 167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,265,008 Number of Sequences: 3902068 Number of extensions: 1265008 Number of successful extensions: 112452 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107533 Number of HSP's gapped (non-prelim): 4918 length of query: 123 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 102 effective length of database: 17,151,101,840 effective search space: 1749412387680 effective search space used: 1749412387680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
