>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 108     cgtcggcggcggccgggactt 128
               |||||||||||||||||||||
Sbjct: 1873890 cgtcggcggcggccgggactt 1873910

>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds
          Length = 20754

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 92    ggcgaagccttgccgtcgtcggcggcggc 120
             |||||||||  ||||||||||||||||||
Sbjct: 18785 ggcgaagcccagccgtcgtcggcggcggc 18813

>ref|XM_469522.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 ggcggcgctccggcggttct 234
           ||||||||||||||||||||
Sbjct: 36  ggcggcgctccggcggttct 55

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      ggcggcgctccggcggttct 234
                ||||||||||||||||||||
Sbjct: 28479726 ggcggcgctccggcggttct 28479745

>emb|CR974569.7| Pig DNA sequence from clone CH242-255C19 on chromosome 17, complete
             sequence
          Length = 104107

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    gctgcctaagggcgcggcca 91
             ||||||||||||||||||||
Sbjct: 55319 gctgcctaagggcgcggcca 55338

>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence
          Length = 176757

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gctggcgtgggccggcgccc 170
              ||||||||||||||||||||
Sbjct: 121907 gctggcgtgggccggcgccc 121888

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 103     gccgtcgtcggcggcggccg 122
               ||||||||||||||||||||
Sbjct: 1125668 gccgtcgtcggcggcggccg 1125649

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     gttggcggcgctccggcggt 231
               ||||||||||||||||||||
Sbjct: 8600763 gttggcggcgctccggcggt 8600744

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 105     cgtcgtcggcggcggccggg 124
               ||||||||||||||||||||
Sbjct: 7511327 cgtcgtcggcggcggccggg 7511308

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      ggcggcgctccggcggttct 234
                ||||||||||||||||||||
Sbjct: 28571050 ggcggcgctccggcggttct 28571069

>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ggcggcgctccggcggttct 234
             ||||||||||||||||||||
Sbjct: 73856 ggcggcgctccggcggttct 73875

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 107     tcgtcggcggcggccgggac 126
               ||||||||||||||||||||
Sbjct: 2875246 tcgtcggcggcggccgggac 2875265

>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0412C04
          Length = 146849

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   cgtcgtcggcggcggccggg 124
             ||||||||||||||||||||
Sbjct: 71258 cgtcgtcggcggcggccggg 71239

>dbj|AK098968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088B04, full
           insert sequence
          Length = 1751

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 ggcggcgctccggcggttct 234
           ||||||||||||||||||||
Sbjct: 63  ggcggcgctccggcggttct 82

>dbj|AK073205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G06, full
           insert sequence
          Length = 1754

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 ggcggcgctccggcggttct 234
           ||||||||||||||||||||
Sbjct: 69  ggcggcgctccggcggttct 88

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     gttggcggcgctccggcggt 231
               ||||||||||||||||||||
Sbjct: 8600646 gttggcggcgctccggcggt 8600627

>emb|AL844877.2|CNS08CB0 Oryza sativa chromosome 12, . BAC OSJNBb0034B07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 125000

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gttggcggcgctccggcggt 231
             ||||||||||||||||||||
Sbjct: 63510 gttggcggcgctccggcggt 63491


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,181,197
Number of Sequences: 3902068
Number of extensions: 1181197
Number of successful extensions: 30361
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29855
Number of HSP's gapped (non-prelim): 506
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)