>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 109     cctgccgccgccatggatggatg 131
               |||||||||||||||||||||||
Sbjct: 2899419 cctgccgccgccatggatggatg 2899441

>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 109    cctgccgccgccatggatggatg 131
              |||||||||||||||||||||||
Sbjct: 142900 cctgccgccgccatggatggatg 142922

>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 109   cctgccgccgccatggatggatg 131
             |||||||||||||||||||||||
Sbjct: 59565 cctgccgccgccatggatggatg 59587

>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full
            insert sequence
          Length = 1439

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 109  cctgccgccgccatggatggatg 131
            |||||||||||||||||||||||
Sbjct: 1260 cctgccgccgccatggatggatg 1282

>gb|U97662.1|CRU97662 Chlamydomonas reinhardtii phosphatidylinositol 3-kinase mRNA, partial
            cds
          Length = 2200

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 337  ccggaggcggcgccgccgctgg 358
            ||||||||||||||||||||||
Sbjct: 1298 ccggaggcggcgccgccgctgg 1277

>ref|XM_483113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 96  atctcgtcttcctcctgccgccgcc 120
           ||||||||||| |||||||||||||
Sbjct: 199 atctcgtcttcttcctgccgccgcc 175

>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0082P17, complete sequence
          Length = 157539

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   accccctcctcgcccgcgcca 187
             |||||||||||||||||||||
Sbjct: 33311 accccctcctcgcccgcgcca 33291

>ref|XM_581398.2| PREDICTED: Bos taurus similar to Loricrin (LOC505154), mRNA
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 ccggaggcggcgccgccgctggagt 361
           ||||||| |||||||||||||||||
Sbjct: 407 ccggaggaggcgccgccgctggagt 383

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 48      ggttgcgggaggggaagaaga 68
               |||||||||||||||||||||
Sbjct: 7450012 ggttgcgggaggggaagaaga 7449992



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     cggaggcggcgccgccgctg 357
               ||||||||||||||||||||
Sbjct: 8635187 cggaggcggcgccgccgctg 8635206

>ref|XM_544899.2| PREDICTED: Canis familiaris hypothetical LOC487774 (LOC487774),
           mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 396 gctccaggggctgctgccgcgggtc 420
           ||||||||||||||||| |||||||
Sbjct: 325 gctccaggggctgctgcagcgggtc 301

>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030I07, complete sequence
          Length = 122733

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   accccctcctcgcccgcgcca 187
             |||||||||||||||||||||
Sbjct: 85292 accccctcctcgcccgcgcca 85272

>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    ggttgcgggaggggaagaaga 68
             |||||||||||||||||||||
Sbjct: 88567 ggttgcgggaggggaagaaga 88547

>ref|NM_053073.2| Mus musculus low density lipoprotein receptor-related protein 8,
           apolipoprotein e receptor (Lrp8), mRNA
          Length = 3205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  gtcaaggagtgtgaagaggac 93
           |||||||||||||||||||||
Sbjct: 264 gtcaaggagtgtgaagaggac 284

>emb|AJ312058.1|MMU312058 Mus musculus mRNA for ApoE receptor-2 (ApoER2 gene)
          Length = 2648

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  gtcaaggagtgtgaagaggac 93
           |||||||||||||||||||||
Sbjct: 112 gtcaaggagtgtgaagaggac 132

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 167      accccctcctcgcccgcgcca 187
                |||||||||||||||||||||
Sbjct: 26623034 accccctcctcgcccgcgcca 26623014

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 96       atctcgtcttcctcctgccgccgcc 120
                ||||||||||| |||||||||||||
Sbjct: 24342451 atctcgtcttcttcctgccgccgcc 24342427

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 48      ggttgcgggaggggaagaaga 68
               |||||||||||||||||||||
Sbjct: 7447847 ggttgcgggaggggaagaaga 7447827



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     cggaggcggcgccgccgctg 357
               ||||||||||||||||||||
Sbjct: 8633022 cggaggcggcgccgccgctg 8633041

>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686H11
          Length = 135273

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    atctcgtcttcctcctgccgccgcc 120
             ||||||||||| |||||||||||||
Sbjct: 82755 atctcgtcttcttcctgccgccgcc 82731

>dbj|AK072703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135J11,
          full insert sequence
          Length = 1125

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 48 ggttgcgggaggggaagaaga 68
          |||||||||||||||||||||
Sbjct: 35 ggttgcgggaggggaagaaga 15

>dbj|AK064767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A02,
          full insert sequence
          Length = 2755

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 48 ggttgcgggaggggaagaaga 68
          |||||||||||||||||||||
Sbjct: 38 ggttgcgggaggggaagaaga 18

>dbj|AK062662.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-F06,
          full insert sequence
          Length = 732

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 48 ggttgcgggaggggaagaaga 68
          |||||||||||||||||||||
Sbjct: 36 ggttgcgggaggggaagaaga 16

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 167      accccctcctcgcccgcgcca 187
                |||||||||||||||||||||
Sbjct: 26948298 accccctcctcgcccgcgcca 26948278

>emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on chromosome 4, complete
              sequence
          Length = 174593

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     gtcaaggagtgtgaagaggac 93
              |||||||||||||||||||||
Sbjct: 101825 gtcaaggagtgtgaagaggac 101845

>dbj|D85463.1| Mus musculus mRNA for apolipoprotein E receptor 2, complete cds
          Length = 3291

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  gtcaaggagtgtgaagaggac 93
           |||||||||||||||||||||
Sbjct: 264 gtcaaggagtgtgaagaggac 284

>ref|NM_187526.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 cggaggcggcgccgccgctg 357
           ||||||||||||||||||||
Sbjct: 49  cggaggcggcgccgccgctg 30

>gb|BT018884.1| Zea mays clone EL01T0205B04.d mRNA sequence
          Length = 1603

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 332 gcggtccggaggcggcgccgccgc 355
           |||||||||||||| |||||||||
Sbjct: 288 gcggtccggaggcgccgccgccgc 265

>gb|AC122402.2| Mus musculus BAC clone RP24-108B4 from chromosome 13, complete
            sequence
          Length = 175669

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  gccgccgccatggatggatgagga 135
            ||||||| ||||||||||||||||
Sbjct: 5200 gccgccggcatggatggatgagga 5177

>emb|X65128.1|MMGAS1MR M.musculus gas1 mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 112 gccgccgccatggatggatgagga 135
           ||||||| ||||||||||||||||
Sbjct: 412 gccgccggcatggatggatgagga 435

>gb|AC139214.12| Mus musculus chromosome 17, clone RP23-345D6, complete sequence
          Length = 286283

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    ggctccaggggctgctgccgcggg 418
              |||| |||||||||||||||||||
Sbjct: 187713 ggcttcaggggctgctgccgcggg 187690

>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    ccccctcctcgcccgcgcca 187
              ||||||||||||||||||||
Sbjct: 106594 ccccctcctcgcccgcgcca 106613

>gb|AC015908.10| Homo sapiens chromosome 17, clone RP11-963H4, complete sequence
          Length = 158693

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    tccaggggctgctgccgcgg 417
              ||||||||||||||||||||
Sbjct: 109024 tccaggggctgctgccgcgg 109005

>ref|NM_008086.1| Mus musculus growth arrest specific 1 (Gas1), mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 112 gccgccgccatggatggatgagga 135
           ||||||| ||||||||||||||||
Sbjct: 412 gccgccggcatggatggatgagga 435

>dbj|AK165191.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:E970027F08 product:cyclin D3,
            full insert sequence
          Length = 3860

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 395  ggctccaggggctgctgccgcggg 418
            |||| |||||||||||||||||||
Sbjct: 3023 ggcttcaggggctgctgccgcggg 3000

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    cggaggcggcgccgccgctg 357
              ||||||||||||||||||||
Sbjct: 116159 cggaggcggcgccgccgctg 116178

>gb|AC124392.6| Mus musculus BAC clone RP24-441F24 from chromosome 13, complete
             sequence
          Length = 159514

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   gccgccgccatggatggatgagga 135
             ||||||| ||||||||||||||||
Sbjct: 31560 gccgccggcatggatggatgagga 31583

>dbj|AK106060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F12, full
           insert sequence
          Length = 1228

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 cggaggcggcgccgccgctg 357
           ||||||||||||||||||||
Sbjct: 108 cggaggcggcgccgccgctg 89

>gb|U43844.1|MMU43844 Mus musculus cyclin D3 gene, complete cds
          Length = 8267

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 395  ggctccaggggctgctgccgcggg 418
            |||| |||||||||||||||||||
Sbjct: 5477 ggcttcaggggctgctgccgcggg 5454

>gb|AC156573.3| Mus musculus BAC clone RP23-133P6 from chromosome 15, complete sequence
          Length = 198278

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   agcccagaccccctcctcgc 179
             ||||||||||||||||||||
Sbjct: 76898 agcccagaccccctcctcgc 76879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,036,063
Number of Sequences: 3902068
Number of extensions: 3036063
Number of successful extensions: 65308
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64861
Number of HSP's gapped (non-prelim): 447
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)