ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast77a03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188548.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 272 bits (137), Expect = 8e-70 Identities = 188/205 (91%) Strand = Plus / Plus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 158 tgacggtgacgacgctccgcgggaagcaccgacgcggggagcccatcaccgtcgtcacgg 217 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||| Sbjct: 218 cctacgactacccgtccgcggtgcacgtcgactcggccgggatcgacgtctgcctcgtcg 277 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 | ||||| || |||||||| || ||||||||||||||||| ||||||||||| ||||||| Sbjct: 278 gggactcggcggccatggtggtgcacggccacgacaccacgctccccatctcgctcgacg 337 Query: 383 tcatgctcgagcactgccgcgccgt 407 ||||||||||||||||||||||||| Sbjct: 338 tcatgctcgagcactgccgcgccgt 362 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 123 gcggcggatgctgagcaacgtgccggagtcgaccgtctatgggggcccgcggccgcagga 182 ||||||| ||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 48 gcggcggccgctgagccacgtgccggagtcggccgtctacggcgggccgcggccgcagga 107
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 272 bits (137), Expect = 8e-70 Identities = 188/205 (91%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 6910941 tgacggtgacgacgctccgcgggaagcaccgacgcggggagcccatcaccgtcgtcacgg 6910882 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||| Sbjct: 6910881 cctacgactacccgtccgcggtgcacgtcgactcggccgggatcgacgtctgcctcgtcg 6910822 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 | ||||| || |||||||| || ||||||||||||||||| ||||||||||| ||||||| Sbjct: 6910821 gggactcggcggccatggtggtgcacggccacgacaccacgctccccatctcgctcgacg 6910762 Query: 383 tcatgctcgagcactgccgcgccgt 407 ||||||||||||||||||||||||| Sbjct: 6910761 tcatgctcgagcactgccgcgccgt 6910737 Score = 244 bits (123), Expect = 2e-61 Identities = 189/211 (89%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||| || |||| ||||||||||||||||| || |||||||| |||| | | ||||||| Sbjct: 6913801 tgacgctggcgacgctccgcgggaagcaccggcgcggggagccgatcagcatggtgaccg 6913742 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| |||| || ||||||||| |||| ||| ||||| |||||||||||| Sbjct: 6913741 cctacgactacccgtccggggtgcacgtcgacgccgccgggttcgacatctgcctcgtcg 6913682 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 6913681 gcgactccgccgccatggtcgcgcacggccacgacaacaccctccccatctccctcgacc 6913622 Query: 383 tcatgctcgagcactgccgcgccgtggcgcg 413 ||||| ||||||||||||||||||||||||| Sbjct: 6913621 tcatgatcgagcactgccgcgccgtggcgcg 6913591 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 123 gcggcggatgctgagcaacgtgccggagtcgaccgtctatgggggcccgcggccgcagga 182 ||||||| ||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 6911051 gcggcggccgctgagccacgtgccggagtcggccgtctacggcgggccgcggccgcagga 6910992
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 272 bits (137), Expect = 8e-70 Identities = 188/205 (91%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 78665 tgacggtgacgacgctccgcgggaagcaccgacgcggggagcccatcaccgtcgtcacgg 78606 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||| Sbjct: 78605 cctacgactacccgtccgcggtgcacgtcgactcggccgggatcgacgtctgcctcgtcg 78546 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 | ||||| || |||||||| || ||||||||||||||||| ||||||||||| ||||||| Sbjct: 78545 gggactcggcggccatggtggtgcacggccacgacaccacgctccccatctcgctcgacg 78486 Query: 383 tcatgctcgagcactgccgcgccgt 407 ||||||||||||||||||||||||| Sbjct: 78485 tcatgctcgagcactgccgcgccgt 78461 Score = 244 bits (123), Expect = 2e-61 Identities = 189/211 (89%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||| || |||| ||||||||||||||||| || |||||||| |||| | | ||||||| Sbjct: 81525 tgacgctggcgacgctccgcgggaagcaccggcgcggggagccgatcagcatggtgaccg 81466 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| |||| || ||||||||| |||| ||| ||||| |||||||||||| Sbjct: 81465 cctacgactacccgtccggggtgcacgtcgacgccgccgggttcgacatctgcctcgtcg 81406 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 81405 gcgactccgccgccatggtcgcgcacggccacgacaacaccctccccatctccctcgacc 81346 Query: 383 tcatgctcgagcactgccgcgccgtggcgcg 413 ||||| ||||||||||||||||||||||||| Sbjct: 81345 tcatgatcgagcactgccgcgccgtggcgcg 81315 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 123 gcggcggatgctgagcaacgtgccggagtcgaccgtctatgggggcccgcggccgcagga 182 ||||||| ||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 78775 gcggcggccgctgagccacgtgccggagtcggccgtctacggcgggccgcggccgcagga 78716
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 272 bits (137), Expect = 8e-70 Identities = 188/205 (91%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || | Sbjct: 32759 tgacggtgacgacgctccgcgggaagcaccgacgcggggagcccatcaccgtcgtcacgg 32700 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| ||||| || ||||||||||| || |||||||||||||||||||||| Sbjct: 32699 cctacgactacccgtccgcggtgcacgtcgactcggccgggatcgacgtctgcctcgtcg 32640 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 | ||||| || |||||||| || ||||||||||||||||| ||||||||||| ||||||| Sbjct: 32639 gggactcggcggccatggtggtgcacggccacgacaccacgctccccatctcgctcgacg 32580 Query: 383 tcatgctcgagcactgccgcgccgt 407 ||||||||||||||||||||||||| Sbjct: 32579 tcatgctcgagcactgccgcgccgt 32555 Score = 244 bits (123), Expect = 2e-61 Identities = 189/211 (89%) Strand = Plus / Minus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||| || |||| ||||||||||||||||| || |||||||| |||| | | ||||||| Sbjct: 35619 tgacgctggcgacgctccgcgggaagcaccggcgcggggagccgatcagcatggtgaccg 35560 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| |||| || ||||||||| |||| ||| ||||| |||||||||||| Sbjct: 35559 cctacgactacccgtccggggtgcacgtcgacgccgccgggttcgacatctgcctcgtcg 35500 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 35499 gcgactccgccgccatggtcgcgcacggccacgacaacaccctccccatctccctcgacc 35440 Query: 383 tcatgctcgagcactgccgcgccgtggcgcg 413 ||||| ||||||||||||||||||||||||| Sbjct: 35439 tcatgatcgagcactgccgcgccgtggcgcg 35409 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 123 gcggcggatgctgagcaacgtgccggagtcgaccgtctatgggggcccgcggccgcagga 182 ||||||| ||||||| |||||||||||||| ||||||| || || |||||||||||||| Sbjct: 32869 gcggcggccgctgagccacgtgccggagtcggccgtctacggcgggccgcggccgcagga 32810
>ref|NM_188549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1200 Score = 244 bits (123), Expect = 2e-61 Identities = 189/211 (89%) Strand = Plus / Plus Query: 203 tgacggtgacgaccctccgcgggaagcaccgccggggggagcccatcaccgtcgtgaccg 262 ||||| || |||| ||||||||||||||||| || |||||||| |||| | | ||||||| Sbjct: 251 tgacgctggcgacgctccgcgggaagcaccggcgcggggagccgatcagcatggtgaccg 310 Query: 263 cctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctcgtcg 322 ||||||||||||| |||| || ||||||||| |||| ||| ||||| |||||||||||| Sbjct: 311 cctacgactacccgtccggggtgcacgtcgacgccgccgggttcgacatctgcctcgtcg 370 Query: 323 gcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctccctcgacg 382 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 371 gcgactccgccgccatggtcgcgcacggccacgacaacaccctccccatctccctcgacc 430 Query: 383 tcatgctcgagcactgccgcgccgtggcgcg 413 ||||| ||||||||||||||||||||||||| Sbjct: 431 tcatgatcgagcactgccgcgccgtggcgcg 461
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccacc 363 ||||||||||||||||||| |||||| ||||| ||||||||||| Sbjct: 1800317 gtcggcgactccgccgccaacgtcgtctacggctacgacaccacc 1800273
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ccccatctccctcgacgtcatgc 388 ||||||||||||||||||||||| Sbjct: 20101795 ccccatctccctcgacgtcatgc 20101817
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 ccccatctccctcgacgtcatgc 388 ||||||||||||||||||||||| Sbjct: 50318 ccccatctccctcgacgtcatgc 50340
>ref|NM_130174.3| Arabidopsis thaliana 3-methyl-2-oxobutanoate hydroxymethyltransferase AT2G46110 mRNA, complete cds Length = 1511 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 247 atcaccgtcgtgaccgcctacgactacccctccgccgt 284 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 288 atcaccgtcgtaactgcctacgattacccatccgccgt 325
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 247 atcaccgtcgtgaccgcctacgactacccctccgccgt 284 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 67325 atcaccgtcgtaactgcctacgattacccatccgccgt 67362
>gb|BT004820.1| Arabidopsis thaliana At2g46110 gene, complete cds Length = 1044 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 247 atcaccgtcgtgaccgcctacgactacccctccgccgt 284 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 169 atcaccgtcgtaactgcctacgattacccatccgccgt 206
>ref|NM_116018.2| Arabidopsis thaliana 3-methyl-2-oxobutanoate hydroxymethyltransferase AT3G61530 transcript variant AT3G61530.1 mRNA, complete cds Length = 1304 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 230 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 289 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 290 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 346
>ref|NM_202745.1| Arabidopsis thaliana 3-methyl-2-oxobutanoate hydroxymethyltransferase AT3G61530 transcript variant AT3G61530.2 mRNA, complete cds Length = 1673 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 572 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 631 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 632 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 688
>ref|NM_120025.2| Arabidopsis thaliana unknown protein AT4G38640 mRNA, complete cds Length = 2100 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 209 tccgccgccatggtcgtccac 189
>gb|BT025255.1| Arabidopsis thaliana At3g61530 mRNA, complete cds Length = 1065 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 187 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 246 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 247 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 303
>gb|BC052647.1| Mus musculus cDNA clone IMAGE:30030590, partial cds Length = 1618 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 cgcttcgcacgatggcgacgcggcacgcc 108 |||| |||||||||||| ||||||||||| Sbjct: 739 cgctccgcacgatggcggcgcggcacgcc 711
>emb|Z17372.1|MSASDASK M.smegmatis asd, ask-alpha, and ask-beta genes Length = 5037 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 ccgcggggatcgacgtctgcctcgtcggc 324 ||||||| ||||||| ||||||||||||| Sbjct: 3211 ccgcgggtatcgacgactgcctcgtcggc 3239
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 171023 tccgccgccatggtcgtccac 171043
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Minus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 67268 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 67209 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 67208 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 67152
>emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A14 (ESSA project) Length = 88164 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 8650 tccgccgccatggtcgtccac 8670
>gb|AY059908.1| Arabidopsis thaliana putative protein (F20M13.200) mRNA, complete cds Length = 2028 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 209 tccgccgccatggtcgtccac 189
>emb|BX822672.1|CNS0A78Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1252 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 177 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 236 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 237 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 293
>emb|BX823298.1|CNS0A4X7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZD07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1678 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 572 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 631 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 632 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 688
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene locus, complete sequence Length = 108584 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 cgtcgactccgcggggatcgacgtctgcc 316 ||||||| ||||||||||||||| ||||| Sbjct: 52375 cgtcgacaccgcggggatcgacggctgcc 52347
>gb|AY087528.1| Arabidopsis thaliana clone 36358 mRNA, complete sequence Length = 1302 Score = 42.1 bits (21), Expect = 1.4 Identities = 93/117 (79%) Strand = Plus / Plus Query: 259 accgcctacgactacccctccgccgtccacgtcgactccgcggggatcgacgtctgcctc 318 ||||||||||| ||||| || ||||| ||| |||| | || || ||||| || || ||| Sbjct: 230 accgcctacgattacccttctgccgttcacatcgatacagctggaatcgatgtttgtctc 289 Query: 319 gtcggcgactccgccgccatggtcgtccacggccacgacaccaccctccccatctcc 375 ||||| || || || |||||||| ||||| ||| | |||||||| || || |||||| Sbjct: 290 gtcggagattcagctgccatggttgtccatggctatgacaccactcttcctatctcc 346
>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome IV, complete sequence Length = 94770 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 72253 tccgccgccatggtcgtccac 72233
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cgcggcacgccttccggcgcc 118 ||||||||||||||||||||| Sbjct: 1698562 cgcggcacgccttccggcgcc 1698582
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project) Length = 91938 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tccgccgccatggtcgtccac 348 ||||||||||||||||||||| Sbjct: 71964 tccgccgccatggtcgtccac 71984
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cggccacgacaccaccctccccat 371 |||| ||||||||||||||||||| Sbjct: 1021770 cggctacgacaccaccctccccat 1021747
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0082P17, complete sequence Length = 157539 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 ccgccgccatggtcgtccacggcc 352 |||||||||| ||||||||||||| Sbjct: 34297 ccgccgccatcgtcgtccacggcc 34274
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 cgactccgccgccatggtcgtccacggc 351 |||| ||||||||||||||||| ||||| Sbjct: 92755 cgacgccgccgccatggtcgtcgacggc 92728
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 ccgccgccatggtcgtccacggcc 352 |||||||||| ||||||||||||| Sbjct: 86278 ccgccgccatcgtcgtccacggcc 86255
>emb|X54118.1|DTADH D.teissieri Adh gene for alcohol dehydrogenase and Adh-related gene Length = 4321 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 cccatcaccgtcgtgaccgcctac 267 |||||||||| ||||||||||||| Sbjct: 2277 cccatcaccggcgtgaccgcctac 2300
>tpg|BK005057.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 54 (WRKY54) gene, complete cds Length = 1106 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 cgactccgccgccatggtcgtccacggc 351 |||| ||||||||||||||||| ||||| Sbjct: 701 cgacgccgccgccatggtcgtcgacggc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 ccgccgccatggtcgtccacggcc 352 |||||||||| ||||||||||||| Sbjct: 26624020 ccgccgccatcgtcgtccacggcc 26623997
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 cgactccgccgccatggtcgtccacggc 351 |||| ||||||||||||||||| ||||| Sbjct: 23407219 cgacgccgccgccatggtcgtcgacggc 23407192
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gtgaccgcctacgactaccc 275 |||||||||||||||||||| Sbjct: 454573 gtgaccgcctacgactaccc 454554 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 tccacggccacgacaccaccctcc 367 ||||| |||||||||||||||||| Sbjct: 386412 tccaccgccacgacaccaccctcc 386435
>dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-312N17, complete sequences Length = 167368 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caccaccctccccatctccc 376 |||||||||||||||||||| Sbjct: 95779 caccaccctccccatctccc 95798
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 actcgaacgccgccgcttcg 86 |||||||||||||||||||| Sbjct: 1010655 actcgaacgccgccgcttcg 1010636
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 ccgccgccatggtcgtccacggcc 352 |||||||||| ||||||||||||| Sbjct: 26949284 ccgccgccatcgtcgtccacggcc 26949261 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,906,935 Number of Sequences: 3902068 Number of extensions: 1906935 Number of successful extensions: 42009 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41523 Number of HSP's gapped (non-prelim): 486 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
