| Clone Name | bast76h07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I06, full insert sequence Length = 1215 Score = 196 bits (99), Expect = 5e-47 Identities = 157/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 280 ggaggagggtaccagcctccggggagtcctctagatggagatgtagaaacacagacaaac 339 |||||||||||||||||||| |||| ||| |||||||| ||||||||| || ||||| Sbjct: 297 ggaggagggtaccagcctccagggacccctgcagatggagttgtagaaactcaaacaaat 356 Query: 340 tggaaaggatacttcaatgttgcctcttatgctccatatttcaatgttgacactgatgtc 399 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 357 tggaaaggatacttcaatgttgcatcttatgctccatatttcaatgttgatactgatgtt 416 Query: 400 gtggtcgacaggctcatcagttcagtttatccaatggat-ggattttcaggaaga 453 || || |||||||||||||| || ||||||||||||||| || |||||||||||| Sbjct: 417 gtagttgacaggctcatcagctcggtttatccaatggatgggtttttcaggaaga 471 Score = 123 bits (62), Expect = 6e-25 Identities = 62/62 (100%) Strand = Plus / Plus Query: 109 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 185 Query: 169 gc 170 || Sbjct: 186 gc 187 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 234 cacctcgcgcttgcagcagtttccgcctgctc 265 ||||||||| ||||||||||||| ||||||| Sbjct: 236 cacctcgcgtctgcagcagtttcctcctgctc 267
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 180 bits (91), Expect = 3e-42 Identities = 131/143 (91%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 312 agatggagatgtagaaacacagacaaactggaaaggatacttcaatgttgcctcttatgc 371 |||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 93441 agatggagatgtagaaactcaaacaaattggaaaggatacttcaatgttgcatcttatgc 93500 Query: 372 tccatatttcaatgttgacactgatgtcgtggtcgacaggctcatcagttcagtttatcc 431 |||||||||||||||||| |||||||| || || |||||||||||||| || |||||||| Sbjct: 93501 tccatatttcaatgttgatactgatgttgtagttgacaggctcatcagctcggtttatcc 93560 Query: 432 aatggat-ggattttcaggaaga 453 ||||||| || |||||||||||| Sbjct: 93561 aatggatgggtttttcaggaaga 93583 Score = 121 bits (61), Expect = 2e-24 Identities = 61/61 (100%) Strand = Plus / Plus Query: 109 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92222 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 92281 Query: 169 g 169 | Sbjct: 92282 g 92282 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 217 gttggaaatgcaactgccacctcgcgcttgcagcagtttccgcctgctc 265 |||||||||||| || ||||||||| ||||||||||||| ||||||| Sbjct: 92511 gttggaaatgcagttggcacctcgcgtctgcagcagtttcctcctgctc 92559 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 ggaggagggtaccagcctccgggga 304 |||||||||||||||||||| |||| Sbjct: 92589 ggaggagggtaccagcctccaggga 92613
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 180 bits (91), Expect = 3e-42 Identities = 131/143 (91%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 312 agatggagatgtagaaacacagacaaactggaaaggatacttcaatgttgcctcttatgc 371 |||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct: 22250176 agatggagatgtagaaactcaaacaaattggaaaggatacttcaatgttgcatcttatgc 22250235 Query: 372 tccatatttcaatgttgacactgatgtcgtggtcgacaggctcatcagttcagtttatcc 431 |||||||||||||||||| |||||||| || || |||||||||||||| || |||||||| Sbjct: 22250236 tccatatttcaatgttgatactgatgttgtagttgacaggctcatcagctcggtttatcc 22250295 Query: 432 aatggat-ggattttcaggaaga 453 ||||||| || |||||||||||| Sbjct: 22250296 aatggatgggtttttcaggaaga 22250318 Score = 121 bits (61), Expect = 2e-24 Identities = 61/61 (100%) Strand = Plus / Plus Query: 109 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22248957 gcggccatggacgagggctacgccaacctccccaccagccacctcctcggctccgtcccc 22249016 Query: 169 g 169 | Sbjct: 22249017 g 22249017 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 217 gttggaaatgcaactgccacctcgcgcttgcagcagtttccgcctgctc 265 |||||||||||| || ||||||||| ||||||||||||| ||||||| Sbjct: 22249246 gttggaaatgcagttggcacctcgcgtctgcagcagtttcctcctgctc 22249294 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 ggaggagggtaccagcctccgggga 304 |||||||||||||||||||| |||| Sbjct: 22249324 ggaggagggtaccagcctccaggga 22249348 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cctcctcggctccgtccccg 169 |||||||||||||||||||| Sbjct: 6074486 cctcctcggctccgtccccg 6074467
>gb|AY107310.1| Zea mays PCO079728 mRNA sequence Length = 861 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 406 gacaggctcatcagttcagtttatccaatggatggatttt 445 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 11 gacaggctcatcagttcagtttatccaatggatggttttt 50
>ref|NM_197421.1| Oryza sativa (japonica cultivar-group) putative membrane protein (OSJNBa0096G08.9), mRNA Length = 1620 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 cgccaacctccccaccagccacctcctcggctccgtcc 166 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 642 cgcccacctccccatcaaccacctcctcgtctccgtcc 679
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 cgccaacctccccaccagccacctcctcggctccgtcc 166 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 49877 cgcccacctccccatcaaccacctcctcgtctccgtcc 49914
>ref|XM_366901.1| Magnaporthe grisea 70-15 chromosome VII predicted protein (MG02977.4) partial mRNA Length = 1809 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 ctccccaccagccacctcctcg 157 |||||||||||||||||||||| Sbjct: 1425 ctccccaccagccacctcctcg 1404
>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence Length = 149442 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 ctgctcctcctgctgccagtgg 281 |||||||||||||||||||||| Sbjct: 16458 ctgctcctcctgctgccagtgg 16437
>dbj|AK082193.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230021L15 product:unclassifiable, full insert sequence Length = 2837 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 ctgctcctcctgctgccagtgg 281 |||||||||||||||||||||| Sbjct: 1942 ctgctcctcctgctgccagtgg 1963
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 cgccaacctccccaccagccacctcctcggctccgtcc 166 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 19788839 cgcccacctccccatcaaccacctcctcgtctccgtcc 19788876
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 cggcgacgcggcggcggccatg 67 |||||||||||||||||||||| Sbjct: 708149 cggcgacgcggcggcggccatg 708170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cgacgcggcggcggccatgc 68 |||||||||||||||||||| Sbjct: 678745 cgacgcggcggcggccatgc 678764
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 cgccaacctccccaccagccacctcctcggctccgtcc 166 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 19800115 cgcccacctccccatcaaccacctcctcgtctccgtcc 19800152
>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence Length = 166132 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 ctgctcctcctgctgccagtgg 281 |||||||||||||||||||||| Sbjct: 159474 ctgctcctcctgctgccagtgg 159453
>gb|AY427417.1| Pseudococcus odermatti 28S large subunit ribosomal RNA gene, partial sequence Length = 808 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tgctgacgggcgacgacgcca 94 ||||||||||||||||||||| Sbjct: 501 tgctgacgggcgacgacgcca 481
>gb|BT011104.1| Drosophila melanogaster LP09056 full insert cDNA Length = 4249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 1058 gtttccgcctgctcctcctgc 1038
>ref|NM_169673.1| Drosophila melanogaster CG4699-RC, transcript variant C (CG4699), mRNA Length = 5764 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 2827 gtttccgcctgctcctcctgc 2807
>ref|NM_169672.1| Drosophila melanogaster CG4699-RB, transcript variant B (CG4699), mRNA Length = 5966 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 3029 gtttccgcctgctcctcctgc 3009
>ref|NM_142235.1| Drosophila melanogaster CG4699-RA, transcript variant A (CG4699), mRNA Length = 5870 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 2933 gtttccgcctgctcctcctgc 2913
>ref|XM_681555.1| PREDICTED: Danio rerio similar to multiple PDZ domain protein (LOC558351), mRNA Length = 483 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 acttcaatgttgcctcttatgctcc 374 ||||||||||||||||| ||||||| Sbjct: 152 acttcaatgttgcctctaatgctcc 128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ccccggcgacgcggcggcggc 63 ||||||||||||||||||||| Sbjct: 9688369 ccccggcgacgcggcggcggc 9688389
>gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, region 89A-89A, BAC clone BACR06B08, complete sequence Length = 151447 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 42543 gtttccgcctgctcctcctgc 42523
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ccccggcgacgcggcggcggc 63 ||||||||||||||||||||| Sbjct: 126372 ccccggcgacgcggcggcggc 126392
>dbj|AK099335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024J06, full insert sequence Length = 1159 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ccccggcgacgcggcggcggc 63 ||||||||||||||||||||| Sbjct: 77 ccccggcgacgcggcggcggc 57
>dbj|AK061002.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G09, full insert sequence Length = 1202 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ccccggcgacgcggcggcggc 63 ||||||||||||||||||||| Sbjct: 114 ccccggcgacgcggcggcggc 94
>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone BACR48G17, complete sequence Length = 179122 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 153556 gtttccgcctgctcctcctgc 153536
>gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48 of 118 of the complete sequence Length = 224071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 gtttccgcctgctcctcctgc 272 ||||||||||||||||||||| Sbjct: 142786 gtttccgcctgctcctcctgc 142766
>emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, complete sequence Length = 216608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 acttcaatgttgcctcttatgctcc 374 ||||||||||||||||| ||||||| Sbjct: 214095 acttcaatgttgcctctaatgctcc 214119
>emb|AJ429146.1|OOS429146 Ostertagia ostertagi partial mRNA for keratin (ker gene) Length = 605 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 434 tggatggattttcaggaagaagatg 458 |||||||||||||||||| |||||| Sbjct: 517 tggatggattttcaggaaaaagatg 541
>ref|XM_476098.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 300 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cctcctcggctccgtccccg 169 |||||||||||||||||||| Sbjct: 239 cctcctcggctccgtccccg 258
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cctcctcggctccgtccccg 169 |||||||||||||||||||| Sbjct: 22055 cctcctcggctccgtccccg 22036
>ref|XM_464317.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gaggaaggccggcgtccccgccga 215 ||||||||||||| |||||||||| Sbjct: 483 gaggaaggccggcctccccgccga 506
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cctcctcggctccgtccccg 169 |||||||||||||||||||| Sbjct: 122040 cctcctcggctccgtccccg 122021
>gb|AC073246.5| Trypanosoma brucei chromosome 2 clone RPCI93-25N24, complete sequence Length = 113329 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ccgcctgctcctcctgctgc 275 |||||||||||||||||||| Sbjct: 57005 ccgcctgctcctcctgctgc 57024
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ccgcctgctcctcctgctgc 275 |||||||||||||||||||| Sbjct: 198511 ccgcctgctcctcctgctgc 198492
>ref|NM_016893.2| Mus musculus fucosyltransferase 8 (Fut8), mRNA Length = 3052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 2877 tcatcagttcagtttatcca 2896
>ref|XM_954447.1| Neurospora crassa OR74A hypothetical protein (NCU02412.1) partial mRNA Length = 1158 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 catggacgagggctacgccaacct 137 ||||||||||||| |||||||||| Sbjct: 999 catggacgagggcaacgccaacct 976
>ref|XM_331187.1| Neurospora crassa OR74A hypothetical protein (NCU02412.1) partial mRNA Length = 1158 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 catggacgagggctacgccaacct 137 ||||||||||||| |||||||||| Sbjct: 999 catggacgagggcaacgccaacct 976
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 cgagcggccatggacgagggctac 129 |||| ||||||||||||||||||| Sbjct: 411076 cgagaggccatggacgagggctac 411099
>gb|AC140073.4| Mus musculus BAC clone RP23-282N20 from chromosome 19, complete sequence Length = 245582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 ggaggagggtaccagcctcc 299 |||||||||||||||||||| Sbjct: 159155 ggaggagggtaccagcctcc 159136
>gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosome 12, complete sequence Length = 165700 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 47634 tcatcagttcagtttatcca 47615
>gb|BC010666.1| Mus musculus fucosyltransferase 8, mRNA (cDNA clone MGC:11418 IMAGE:3594582), complete cds Length = 2976 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 2807 tcatcagttcagtttatcca 2826
>gb|DQ157862.1| Mycobacterium sp. CH-2 PdoF (pdoF) gene, partial cds; and PdoA2 (pdoA2), PdoB2 (pdoB2), hypothetical protein, putative ferredoxin, AraC (araC), and putative reductase genes, complete cds Length = 6101 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 acgggcgacgacgccagcga 98 |||||||||||||||||||| Sbjct: 1964 acgggcgacgacgccagcga 1983
>emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 on chromosome 6p21 Contains the BRPF3 gene for bromodomain and PHD finger containing protein 3 and a CpG Island, complete sequence Length = 80908 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 tccccaccagccacctcctcggct 160 |||||||| ||||||||||||||| Sbjct: 48523 tccccacctgccacctcctcggct 48546
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cggcgacgcggcggcggccatgcg 69 |||||||| ||||||||||||||| Sbjct: 3348185 cggcgacggggcggcggccatgcg 3348162
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cgacgacgccagcgaccacgcgcg 107 ||||| |||||||||||||||||| Sbjct: 2355878 cgacgccgccagcgaccacgcgcg 2355901 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 gtggtcgacaggctcatcagttca 423 |||| ||||||||||||||||||| Sbjct: 2029132 gtggacgacaggctcatcagttca 2029155 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgacgcggcggcggccatgc 68 |||||||||||||||||||| Sbjct: 1616016 cgacgcggcggcggccatgc 1615997
>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10 Length = 332450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 cagttcagtttatccaatgg 436 |||||||||||||||||||| Sbjct: 133128 cagttcagtttatccaatgg 133147
>emb|AL049913.1|MLCB1610 Mycobacterium leprae cosmid B1610 Length = 40055 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 cagttcagtttatccaatgg 436 |||||||||||||||||||| Sbjct: 5182 cagttcagtttatccaatgg 5201
>gb|AC107385.4| Homo sapiens BAC clone RP11-158C21 from 4, complete sequence Length = 156442 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 tcagttcagtttatccaatg 435 |||||||||||||||||||| Sbjct: 148626 tcagttcagtttatccaatg 148645
>dbj|AK134537.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330405L05 product:fucosyltransferase 8, full insert sequence Length = 3358 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 2832 tcatcagttcagtttatcca 2851
>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence Length = 193434 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 26682 tcatcagttcagtttatcca 26701
>dbj|AK051811.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230003K17 product:fucosyltransferase 8, full insert sequence Length = 2766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 2696 tcatcagttcagtttatcca 2715
>dbj|AK048520.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130068P22 product:fucosyltransferase 8, full insert sequence Length = 3052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 2877 tcatcagttcagtttatcca 2896
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cccggcgacgcggcggcggc 63 |||||||||||||||||||| Sbjct: 2584932 cccggcgacgcggcggcggc 2584951
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gaggaaggccggcgtccccgccga 215 ||||||||||||| |||||||||| Sbjct: 4083502 gaggaaggccggcctccccgccga 4083525
>gb|AC090885.1|AC090885 Homo sapiens chromosome 3 clone RP11-270I6 map 3p, complete sequence Length = 193264 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tttccgcctgctcctcctgc 272 |||||||||||||||||||| Sbjct: 193062 tttccgcctgctcctcctgc 193043
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tttccgcctgctcctcctgc 272 |||||||||||||||||||| Sbjct: 27356 tttccgcctgctcctcctgc 27337
>gb|AC079031.39| Homo sapiens 12 BAC RP11-503G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89059 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 accagcctccggggagtcct 309 |||||||||||||||||||| Sbjct: 71585 accagcctccggggagtcct 71604
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence Length = 182171 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tttccgcctgctcctcctgc 272 |||||||||||||||||||| Sbjct: 59744 tttccgcctgctcctcctgc 59763
>gb|AC008169.2| Homo sapiens BAC clone RP11-252D22 from 2, complete sequence Length = 173201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 caggctcatcagttcagttt 427 |||||||||||||||||||| Sbjct: 144107 caggctcatcagttcagttt 144088
>gb|AE004620.1| Pseudomonas aeruginosa PAO1, section 181 of 529 of the complete genome Length = 10370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ccgcctgctcctcctgctgc 275 |||||||||||||||||||| Sbjct: 8061 ccgcctgctcctcctgctgc 8042
>gb|AF335495.1| Homo sapiens mucin (MUC8) gene, sequence Length = 16709 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 accagcctccggggagtcct 309 |||||||||||||||||||| Sbjct: 6365 accagcctccggggagtcct 6346
>gb|AC091657.3| Rattus norvegicus strain Brown Norway clone RP31-29N16, complete sequence Length = 141898 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctcctcctgctgccagtgga 282 |||||||||||||||||||| Sbjct: 89343 ctcctcctgctgccagtgga 89324
>dbj|AK216622.1| Mus musculus cDNA, clone:Y2G0138P15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062804, based on BLAT search Length = 393 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 209 tcatcagttcagtttatcca 228
>dbj|AK210295.1| Mus musculus cDNA, clone:Y2G0117O17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062804, based on BLAT search Length = 408 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 223 tcatcagttcagtttatcca 242
>dbj|AK188352.1| Mus musculus cDNA, clone:Y0G0144N21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062804, based on BLAT search Length = 434 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 249 tcatcagttcagtttatcca 268
>dbj|AK185049.1| Mus musculus cDNA, clone:Y0G0132H01, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062804, based on BLAT search Length = 411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 232 tcatcagttcagtttatcca 251
>dbj|AK184830.1| Mus musculus cDNA, clone:Y0G0131K20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062804, based on BLAT search Length = 417 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcatcagttcagtttatcca 432 |||||||||||||||||||| Sbjct: 231 tcatcagttcagtttatcca 250
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cccggcgacgcggcggcggc 63 |||||||||||||||||||| Sbjct: 40273 cccggcgacgcggcggcggc 40292
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gaggaaggccggcgtccccgccga 215 ||||||||||||| |||||||||| Sbjct: 130168 gaggaaggccggcctccccgccga 130191
>dbj|AK068890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002O16, full insert sequence Length = 1042 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 cccggcgacgcggcggcggc 63 |||||||||||||||||||| Sbjct: 218 cccggcgacgcggcggcggc 199
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ggcgacgcggcggcggccatgcgc 70 |||||||||||| ||||||||||| Sbjct: 2211370 ggcgacgcggcgccggccatgcgc 2211347
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ccggcgacgcggcggcggccatgc 68 |||||| ||||||||||||||||| Sbjct: 1410910 ccggcggcgcggcggcggccatgc 1410933
>emb|AL732540.4| Mouse DNA sequence from clone RP23-170L19 on chromosome 4, complete sequence Length = 190289 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tcagtttatccaatggatggattt 444 ||||||| |||||||||||||||| Sbjct: 80598 tcagtttctccaatggatggattt 80575
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tttccgcctgctcctcctgc 272 |||||||||||||||||||| Sbjct: 5651 tttccgcctgctcctcctgc 5670 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,704,589 Number of Sequences: 3902068 Number of extensions: 4704589 Number of successful extensions: 104070 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102896 Number of HSP's gapped (non-prelim): 1174 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)