| Clone Name | bast76f11 |
|---|---|
| Clone Library Name | barley_pub |
>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.9 bits (58), Expect(2) = 0.38 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -2 Query: 126 LPKMAHLEHPIPWHGSPKQPSHPTYLKF 43 LP +HL P+ G P++PS P ++F Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQPRQIEF 283 Score = 23.9 bits (50), Expect(2) = 0.38 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 Query: 269 VTHSLADFDFHGHRP 225 +THSL +F HRP Sbjct: 231 ITHSLCTLEFEDHRP 245
>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.9 bits (58), Expect(2) = 0.38 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -2 Query: 126 LPKMAHLEHPIPWHGSPKQPSHPTYLKF 43 LP +HL P+ G P++PS P ++F Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQPRQIEF 283 Score = 23.9 bits (50), Expect(2) = 0.38 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = -3 Query: 269 VTHSLADFDFHGHRP 225 +THSL +F HRP Sbjct: 231 ITHSLCTLEFEDHRP 245
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 169 CPTAR*PRTHKGCWSIKTAGRWP-WKSKSAKEC 264 C PRTHK C S GR P WK+ KEC Sbjct: 1452 CSHLHKPRTHKACRS----GRCPSWKANKWKEC 1480
>RS13_THEVO (Q97B96) 30S ribosomal protein S13P| Length = 171 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 Query: 143 GMNRKPGYGAQLRANLEPTKGVGRLRQQD 229 G+ + GY R NL+PTK +G L++ + Sbjct: 54 GIGLRLGYAIAERLNLQPTKKIGELKEDE 82
>CCNL1_CHICK (Q5ZJP9) Cyclin-L1| Length = 534 Score = 28.1 bits (61), Expect = 6.1 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +3 Query: 63 GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 173 GSAA+V+ A G P+GP T A TGS VP Sbjct: 6 GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41
>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)| (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) Length = 244 Score = 27.7 bits (60), Expect = 8.0 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +1 Query: 223 AGRWPWKSKSAKEC 264 AGRW W+ K++KEC Sbjct: 227 AGRWWWEDKNSKEC 240
>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)| Length = 461 Score = 27.7 bits (60), Expect = 8.0 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 Query: 120 KMAHLEHPIPWHGSPKQPSHPTY 52 K AHL+H P GSP HP + Sbjct: 201 KNAHLDHRHPGEGSPMSDGHPEH 223
>ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 282 Score = 27.7 bits (60), Expect = 8.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -2 Query: 249 FRLPWPPSCCLNRP 208 FRL W P CC +RP Sbjct: 109 FRLQWCPKCCFHRP 122
>FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment)| Length = 1328 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 92 GIGCSKWAIFGKQNWRCGMNRKPGYG 169 G CS G+Q WRC R+PG G Sbjct: 1265 GAICSCTCYGGQQGWRCDNCRRPGAG 1290
>ZBT34_HUMAN (Q8NCN2) Zinc finger and BTB domain-containing protein 34| Length = 500 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 140 CGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 265 C R+P + LR P+K + R R Q+ GH R SV Sbjct: 168 CSQGRQPTASSDLRMETTPSKAL-RSRLQEEGHSDRGSSGSV 208 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,136,024 Number of Sequences: 219361 Number of extensions: 908433 Number of successful extensions: 2528 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2527 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)