>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III|
          Length = 514

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 278 GALRRREAAVVEDVDLDREVPREQRAAVVPEHDRVGLHQEQH 153
           G + ++EAAV  D  L    PR+ R     +H +  L  E H
Sbjct: 195 GFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHH 236

>CADN_DROME (O15943) Neural-cadherin precursor (Cadherin-N protein) (DN-cadherin)|
          Length = 3097

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 177  PIVLRDHGGALLTG--NLTVKVNVLYYGRFAPAQRAIVVDFVRSVSAPAPRG 326
            PIV++DHG   +TG   LTV +  +   +  P  + I V   +  S   P G
Sbjct: 2052 PIVIKDHGSPAMTGTSTLTVIIGDVNDNKMQPGSKDIFVYNYQGQSPDTPIG 2103

>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II|
          Length = 510

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 278 GALRRREAAVVEDVDLDREVPREQRAAVVPEHDRVGLHQEQH 153
           G + ++EAAV  D  L    PR+ R     +H +  L  E H
Sbjct: 195 GFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHH 236

>EX7L_RALSO (Q8XWE7) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 440

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 282 VVDFVRSVSAPAPRGAAE 335
           +VDFV  V AP P GAAE
Sbjct: 236 IVDFVADVRAPTPTGAAE 253

>YR705_MIMIV (Q5UNW3) Hypothetical protein R705|
          Length = 313

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 26/103 (25%), Positives = 40/103 (38%)
 Frame = -3

Query: 334 SAAPRGAGAETERTKSTTMARCAGAKXXXXXXXXXXXXXXVSSAPPWSRSTIGSGFTRNS 155
           S+  R +G+ +  ++S+  +R  G+K               SS      S   SG +RNS
Sbjct: 214 SSGSRSSGSRSSGSRSSG-SRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGSKSGRSRNS 272

Query: 154 IRGLYAAHPGAAATRRERRQSSGSNGAILRSPMACRISDRAGS 26
             G       + +  R     SGS+     S    R S R+GS
Sbjct: 273 RSGTSGRSSNSRSGSR-----SGSSSRSSNSRSGSRSSSRSGS 310

>CCMF_BRAJA (P45403) Cytochrome c-type biogenesis protein cycK|
          Length = 660

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 201 GALLTGNL--TVKVNVLYYGRFAPAQRAIVVDFVRSVSAP 314
           GAL+  NL  TV   V+ +G   P    ++ DF  SV AP
Sbjct: 349 GALVLNNLLLTVACAVVLFGTLYPLAMEMLADFKMSVGAP 388


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,010,362
Number of Sequences: 219361
Number of extensions: 419465
Number of successful extensions: 1422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)