>MFS18_MAIZE (P32439) MFS18 protein precursor|
          Length = 128

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 37/102 (36%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
 Frame = +1

Query: 88  MEKSTKMXXXXXXXXXXXXTG-AEARNIKTTEAAAASKDAVLQPTTFPPFDRXXXXXXXX 264
           M +S+KM               AEARNIKTT       DAV+QP TFPPFDR        
Sbjct: 1   MARSSKMMVAARLLALALAVSTAEARNIKTT-TTEKKDDAVVQPQTFPPFDR-------- 51

Query: 265 XXXXXXXXXXXXXXXXXXXXATPSFGGI--GSMPFLGGSFPG 384
                               A+P+FGG+  GS+P  G S PG
Sbjct: 52  ----------------LGGGASPAFGGLPGGSIP--GSSIPG 75

>P47K_PSECL (P31521) 47 kDa protein (P47K)|
          Length = 419

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 35  ATRTLARSKNTSSGASYRWRSLPRWWRCSSSPCWPR 142
           A+R L       SG  ++W  + RWW       WPR
Sbjct: 301 ASRHLEIGLLAQSGKQFQWDYVGRWWNFIEPSQWPR 336

>POL_FIVT2 (P31822) Pol polyprotein [Contains: Protease (EC 3.4.23.-)|
           (Retropepsin); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Deoxyuridine
           5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)
           (dUTPase); Integrase (IN)]
          Length = 1124

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 44  TLARSKNTSSGASYRWRSLPRWW 112
           TL R  N   G  Y W SLP+ W
Sbjct: 285 TLPRKNNAGPGRRYVWCSLPQGW 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,777,544
Number of Sequences: 219361
Number of extensions: 297300
Number of successful extensions: 983
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)