ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466437.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
2ref|XM_466438.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
4dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
5dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
6dbj|AK105378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
7dbj|AK063583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
8gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 50 0.004
9ref|XM_504412.1| Yarrowia lipolytica CLIB122, YALI0E26125g predi... 46 0.058
10emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 46 0.058
11gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 44 0.23
12gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
16dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
17dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
18gb|AY107648.1| Zea mays PCO091217 mRNA sequence 42 0.90
19ref|XM_480091.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
20ref|XM_468025.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
21ref|XM_469537.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
22gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 40 3.6
23ref|XM_417816.1| PREDICTED: Gallus gallus similar to dJ1174N9.1 ... 40 3.6
24ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin rep... 40 3.6
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.6
26gb|AC164603.4| Mus musculus chromosome 8, clone RP24-114E3, comp... 40 3.6
27gb|AC125222.4| Mus musculus BAC clone RP23-83G5 from 8, complete... 40 3.6
28gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid... 40 3.6
29emb|AJ131707.2|SGA131707 Streptomyces galbus fda gene, strain DS... 40 3.6
30emb|CR387074.1| Gallus gallus finished cDNA, clone ChEST120l1 40 3.6
31emb|CR385263.1| Gallus gallus finished cDNA, clone ChEST548p18 40 3.6
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 3.6
36gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 geno... 40 3.6
37gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.6
38gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ... 40 3.6
39dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 3.6
40gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 3.6
41dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 3.6
43dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
44dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
45dbj|AK101515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
46gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 3.6
47emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 40 3.6 
>ref|XM_466437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 696

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
           ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 132 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 174
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>ref|XM_466438.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 655

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
           ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 133 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 175
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                           
Query: 96       tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
                ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 22641908 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 22641950



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 118      cgccgtcctcctcgccaccg 137
                ||||||||||||||||||||
Sbjct: 32619262 cgccgtcctcctcgccaccg 32619281
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>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056I22
          Length = 147728

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 96    tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
             ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 89719 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 89761
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>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBb0046O12
          Length = 128223

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
           ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 704 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 746
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>dbj|AK105378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F02, full
           insert sequence
          Length = 655

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
           ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 133 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 175
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>dbj|AK063583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H12, full
           insert sequence
          Length = 696

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  tgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
           ||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 132 tgctcgctgtcctcctcgcatccgccgtcctcctcgccgccgc 174
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>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 103    cgtcctcctcgcgtccgccgtcctcctcgccac 135
              ||||||||||||  |||||||||||||||||||
Sbjct: 273616 cgtcctcctcgccgccgccgtcctcctcgccac 273648



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                                 
Query: 100    cgccgtcctcctcgc-gtccgccgtcctcctcgcc 133
              ||||||||||||||| ||||| |||||||||||||
Sbjct: 424901 cgccgtcctcctcgccgtccgacgtcctcctcgcc 424935



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                      
Query: 101    gccgtcctcctcg-cgtccgccgtcctcctcgccaccgcg 139
              ||||||||||||| |||| |||||| |||||||| |||||
Sbjct: 424863 gccgtcctcctcgccgtcggccgtcgtcctcgccgccgcg 424902



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 95     ctgctcgccgtcctcctcgcgtccgccgtcctcctcgccaccgc 138
              |||| |||||||||||||||   ||||||||| |||||| ||||
Sbjct: 188588 ctgcccgccgtcctcctcgccgtcgccgtcctgctcgccgccgc 188545
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>ref|XM_504412.1| Yarrowia lipolytica CLIB122, YALI0E26125g predicted mRNA
          Length = 699

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 119 gccgtcctcctcgccaccgcggcctcc 145
           |||||||||||||||||||| ||||||
Sbjct: 13  gccgtcctcctcgccaccgccgcctcc 39
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 119     gccgtcctcctcgccaccgcggcctcc 145
               |||||||||||||||||||| ||||||
Sbjct: 3103995 gccgtcctcctcgccaccgccgcctcc 3104021
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 94      cctgctcgccgtcctcctcgcg 115
               ||||||||||||||||||||||
Sbjct: 2226701 cctgctcgccgtcctcctcgcg 2226680
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>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
              complete sequence
          Length = 146677

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    tccgccgtcctcctcgccacc 136
              |||||||||||||||||||||
Sbjct: 108313 tccgccgtcctcctcgccacc 108293
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 116     tccgccgtcctcctcgccaccgcggcctc 144
               ||||||||||||||| ||||||| |||||
Sbjct: 2192438 tccgccgtcctcctctccaccgccgcctc 2192466
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     tccgccgtcctcctcgccacc 136
               |||||||||||||||||||||
Sbjct: 9336368 tccgccgtcctcctcgccacc 9336348
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 116      tccgccgtcctcctcgccaccgcggcctc 144
                ||||||||||||||| ||||||| |||||
Sbjct: 36974787 tccgccgtcctcctctccaccgccgcctc 36974759
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1402_H07
          Length = 140620

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 116   tccgccgtcctcctcgccaccgcggcctc 144
             ||||||||||||||| ||||||| |||||
Sbjct: 65091 tccgccgtcctcctctccaccgccgcctc 65063
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>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0448B11
          Length = 179858

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 116   tccgccgtcctcctcgccaccgcggcctc 144
             ||||||||||||||| ||||||| |||||
Sbjct: 54276 tccgccgtcctcctctccaccgccgcctc 54304
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>gb|AY107648.1| Zea mays PCO091217 mRNA sequence
          Length = 1343

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 114 cgtccgccgtcctcctcgcca 134
           |||||||||||||||||||||
Sbjct: 62  cgtccgccgtcctcctcgcca 82
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>ref|XM_480091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 474

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 tcctcctcgccaccgcggcc 142
           ||||||||||||||||||||
Sbjct: 161 tcctcctcgccaccgcggcc 142
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>ref|XM_468025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 357

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 cgccgtcctcctcgccaccg 137
           ||||||||||||||||||||
Sbjct: 82  cgccgtcctcctcgccaccg 63
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>ref|XM_469537.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 345

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  ctgctcgccgtcctcctcgc 114
           ||||||||||||||||||||
Sbjct: 37  ctgctcgccgtcctcctcgc 56
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>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      ccggcaatggcgtccaccaa 84
               ||||||||||||||||||||
Sbjct: 1178038 ccggcaatggcgtccaccaa 1178019
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>ref|XM_417816.1| PREDICTED: Gallus gallus similar to dJ1174N9.1 (novel protein with
            IBR domain) (LOC419669), mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   tcctgctcgccgtcctcctc 112
            ||||||||||||||||||||
Sbjct: 1697 tcctgctcgccgtcctcctc 1678
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>ref|XM_414205.1| PREDICTED: Gallus gallus similar to ankyrin repeat domain 11;
            nasopharyngeal carcinoma susceptibility protein; ankyrin
            repeat-containing protein 11 (LOC415845), mRNA
          Length = 9564

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  gacaaggaggggaaggtggt 177
            ||||||||||||||||||||
Sbjct: 3202 gacaaggaggggaaggtggt 3221
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 95       ctgctcgccgtcctcctcgc 114
                ||||||||||||||||||||
Sbjct: 28587621 ctgctcgccgtcctcctcgc 28587640
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>gb|AC164603.4| Mus musculus chromosome 8, clone RP24-114E3, complete sequence
          Length = 164927

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    ccaaggctctcttcctgctc 100
             ||||||||||||||||||||
Sbjct: 20451 ccaaggctctcttcctgctc 20470
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>gb|AC125222.4| Mus musculus BAC clone RP23-83G5 from 8, complete sequence
          Length = 177435

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ccaaggctctcttcctgctc 100
             ||||||||||||||||||||
Sbjct: 53959 ccaaggctctcttcctgctc 53940
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>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and
             daunorubicin resistance gene clusters and insertion
             sequences IS1601, IS1245 and IS1348, complete sequence
          Length = 71286

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ggggaaggtggtgaccaacg 185
             ||||||||||||||||||||
Sbjct: 39854 ggggaaggtggtgaccaacg 39835
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>emb|AJ131707.2|SGA131707 Streptomyces galbus fda gene, strain DSM 40480
          Length = 1604

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 cgccgtcctcctcgccaccg 137
           ||||||||||||||||||||
Sbjct: 991 cgccgtcctcctcgccaccg 972
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>emb|CR387074.1| Gallus gallus finished cDNA, clone ChEST120l1
          Length = 906

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 158 gacaaggaggggaaggtggt 177
           ||||||||||||||||||||
Sbjct: 236 gacaaggaggggaaggtggt 255
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>emb|CR385263.1| Gallus gallus finished cDNA, clone ChEST548p18
          Length = 1389

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  tcctgctcgccgtcctcctc 112
           ||||||||||||||||||||
Sbjct: 803 tcctgctcgccgtcctcctc 784
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     tcctcctcgccaccgcggcc 142
               ||||||||||||||||||||
Sbjct: 2688077 tcctcctcgccaccgcggcc 2688058
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     atctagctagctcttgttag 59
              ||||||||||||||||||||
Sbjct: 511901 atctagctagctcttgttag 511920
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 95       ctgctcgccgtcctcctcgc 114
                ||||||||||||||||||||
Sbjct: 28678945 ctgctcgccgtcctcctcgc 28678964
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     cgccgtcctcctcgccaccg 137
               ||||||||||||||||||||
Sbjct: 2114979 cgccgtcctcctcgccaccg 2114960
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>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete
              sequence
          Length = 158839

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ctgctcgccgtcctcctcgc 114
              ||||||||||||||||||||
Sbjct: 111275 ctgctcgccgtcctcctcgc 111256
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 119     gccgtcctcctcgccaccgcggcctccg 146
               ||||||||||||||| ||||| ||||||
Sbjct: 2267189 gccgtcctcctcgccgccgcgccctccg 2267162
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>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
            complete sequence
          Length = 123580

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  cgccgtcctcctcgccaccg 137
            ||||||||||||||||||||
Sbjct: 7510 cgccgtcctcctcgccaccg 7529
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     cgccgtcctcctcgccaccg 137
               ||||||||||||||||||||
Sbjct: 2770758 cgccgtcctcctcgccaccg 2770777
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>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      ccggcaatggcgtccaccaa 84
               ||||||||||||||||||||
Sbjct: 1133145 ccggcaatggcgtccaccaa 1133126
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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0514G12
          Length = 138929

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    atctagctagctcttgttag 59
             ||||||||||||||||||||
Sbjct: 57409 atctagctagctcttgttag 57428
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     tgctcgccgtcctcctcgcg 115
              ||||||||||||||||||||
Sbjct: 975226 tgctcgccgtcctcctcgcg 975207
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>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470H09
          Length = 141257

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   tcctcctcgccaccgcggcc 142
             ||||||||||||||||||||
Sbjct: 66358 tcctcctcgccaccgcggcc 66339
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>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1611_C08
          Length = 135386

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   cgccgtcctcctcgccaccg 137
             ||||||||||||||||||||
Sbjct: 46633 cgccgtcctcctcgccaccg 46652
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>dbj|AK101515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F12, full
           insert sequence
          Length = 2211

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 tccgccgtcctcctcgccaccgcg 139
           ||||||| ||||||||||||||||
Sbjct: 71  tccgccgccctcctcgccaccgcg 94
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 166     ggggaaggtggtgaccaacg 185
               ||||||||||||||||||||
Sbjct: 1305075 ggggaaggtggtgaccaacg 1305056
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>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain
               2308
          Length = 1156948

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      ccggcaatggcgtccaccaa 84
               ||||||||||||||||||||
Sbjct: 1127889 ccggcaatggcgtccaccaa 1127870


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,527,232
Number of Sequences: 3902068
Number of extensions: 1527232
Number of successful extensions: 34889
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34155
Number of HSP's gapped (non-prelim): 723
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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