ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76e11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 233 |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || Sbjct: 48845 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 48786 Query: 234 cccg 237 |||| Sbjct: 48785 cccg 48782
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 233 |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || Sbjct: 35312965 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 35313024 Query: 234 cccg 237 |||| Sbjct: 35313025 cccg 35313028 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 tgcacgccaagacggactcggaggtgac 203 ||||||| |||||||||||||||||||| Sbjct: 21359356 tgcacgcgaagacggactcggaggtgac 21359383
>dbj|AK068260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147H21, full insert sequence Length = 1291 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 233 |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || Sbjct: 139 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 198 Query: 234 cccg 237 |||| Sbjct: 199 cccg 202
>dbj|AK060983.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A12, full insert sequence Length = 1347 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 233 |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || Sbjct: 124 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 183 Query: 234 cccg 237 |||| Sbjct: 184 cccg 187
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 87.7 bits (44), Expect = 2e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctc 233 |||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| || Sbjct: 108810 gatgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtc 108869 Query: 234 cccg 237 |||| Sbjct: 108870 cccg 108873
>ref|XM_474460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 85.7 bits (43), Expect = 7e-14 Identities = 58/63 (92%) Strand = Plus / Plus Query: 175 atgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctcc 234 ||||||||||||||||||||||||||||| ||||||||||| || |||||| |||| ||| Sbjct: 1 atgcacgccaagacggactcggaggtgacgagcctggcgccatcgtcgccgccgcggtcc 60 Query: 235 ccg 237 ||| Sbjct: 61 ccg 63
>gb|BT017703.1| Zea mays clone EL01N0445G07.c mRNA sequence Length = 1208 Score = 60.0 bits (30), Expect = 4e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcgctcccc 236 |||||||||||||||||| || ||||| ||||||||| | ||| ||||| |||| ||||| Sbjct: 49 gcacgccaagacggactccgacgtgacgagcctggcggcgtccacgccgccgcggtcccc 108 Query: 237 gc 238 || Sbjct: 109 gc 110
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 27129085 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 27129032
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 25534 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 25481
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 100734 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 100681
>dbj|AK109816.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H09, full insert sequence Length = 1842 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 121 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 174
>dbj|AK109748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F05, full insert sequence Length = 2462 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 118 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 171
>dbj|AK073500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044J15, full insert sequence Length = 1255 Score = 60.0 bits (30), Expect = 4e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 177 gcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 |||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| Sbjct: 60 gcacgcgaagacggactccgacgtgacgagcctggcgccgtcctcgccgccgcg 113
>ref|XM_550351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 128 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 184
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 3194921 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 3194977
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 149106 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 149162
>dbj|AK106071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H07, full insert sequence Length = 1307 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 126 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 182
>dbj|AK073824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070N04, full insert sequence Length = 1427 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 125 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 181
>dbj|AK060328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A10, full insert sequence Length = 1266 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 128 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 184
>dbj|AK058295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F03, full insert sequence Length = 1463 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcgccctcctcgccggcgcg 230 ||||||||| ||| |||| ||||| ||||| ||||||||||| || |||||| |||| Sbjct: 115 gatgcacgcgaagtcggagtcggacgtgacgagcctggcgccgtcgtcgccgccgcg 171
>ref|XM_472540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 tgcacgccaagacggactcggaggtgac 203 ||||||| |||||||||||||||||||| Sbjct: 467 tgcacgcgaagacggactcggaggtgac 494
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 tgcacgccaagacggactcggaggtgac 203 ||||||| |||||||||||||||||||| Sbjct: 9106 tgcacgcgaagacggactcggaggtgac 9133
>dbj|AK106337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G03, full insert sequence Length = 1384 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 tgcacgccaagacggactcggaggtgac 203 ||||||| |||||||||||||||||||| Sbjct: 121 tgcacgcgaagacggactcggaggtgac 148
>dbj|AK072050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110C07, full insert sequence Length = 1340 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 tgcacgccaagacggactcggaggtgac 203 ||||||| |||||||||||||||||||| Sbjct: 103 tgcacgcgaagacggactcggaggtgac 130
>gb|AY108252.1| Zea mays PCO090236 mRNA sequence Length = 1456 Score = 48.1 bits (24), Expect = 0.016 Identities = 36/40 (90%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcctggcg 213 ||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 182 gatgcacgccaagtcggagtcggacgtgacgagcctggcg 221
>emb|AL049851.1|HS889J22B Human DNA sequence from clone RP5-889J22 on chromosome 22q13.1, complete sequence Length = 11048 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 cacacctcctccctcctccactc 97 ||||||||||||||||||||||| Sbjct: 487 cacacctcctccctcctccactc 509
>dbj|BS000080.1| Pan troglodytes chromosome 22 clone:PTB-090L14, map 22, complete sequences Length = 194210 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cgcacccagcctccttttcttt 47 |||||||||||||||||||||| Sbjct: 3356 cgcacccagcctccttttcttt 3377
>dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12, map 22, complete sequences Length = 158933 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cgcacccagcctccttttcttt 47 |||||||||||||||||||||| Sbjct: 102130 cgcacccagcctccttttcttt 102151
>gb|AY107729.1| Zea mays PCO081379 mRNA sequence Length = 528 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 cctccactctgccccgctccgc 110 |||||||||||||||||||||| Sbjct: 60 cctccactctgccccgctccgc 81
>dbj|AP000959.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-797G14, complete sequence Length = 201112 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cgcacccagcctccttttcttt 47 |||||||||||||||||||||| Sbjct: 8424 cgcacccagcctccttttcttt 8445
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105 Length = 340000 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 cgcacccagcctccttttcttt 47 |||||||||||||||||||||| Sbjct: 282620 cgcacccagcctccttttcttt 282641
>ref|XM_450682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ccctcctcgccggcgcgctcc 234 ||||||||||||||||||||| Sbjct: 668 ccctcctcgccggcgcgctcc 688
>gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complete sequence Length = 192274 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctccactc 97 |||||||||||||||| |||||||| Sbjct: 47420 cccacacctcctccctactccactc 47396
>gb|BC023258.1| Homo sapiens, clone IMAGE:4539309, mRNA Length = 1511 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cctcctccactctgccccgct 106 ||||||||||||||||||||| Sbjct: 576 cctcctccactctgccccgct 556
>gb|AC153011.4| Mus musculus BAC clone RP23-316O20 from chromosome 9, complete sequence Length = 190332 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctccactc 97 |||||||||||||||| |||||||| Sbjct: 134488 cccacacctcctccctactccactc 134464
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 42.1 bits (21), Expect = 1.00 Identities = 27/29 (93%) Strand = Plus / Plus Query: 117 aagcaagcagatccaagcagagtgagcag 145 ||||||||||| |||| |||||||||||| Sbjct: 55164 aagcaagcagagccaaccagagtgagcag 55192
>gb|AC157362.7| Mus musculus chromosome 1, clone RP23-382H8, complete sequence Length = 212565 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 25386 cccacacctcctccctcctcc 25366 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 22133 cccacacctcctccctcctcc 22113
>emb|CR857769.1| Pongo pygmaeus mRNA; cDNA DKFZp469M0211 (from clone DKFZp469M0211) Length = 7092 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 ccacacctcctccctcctcca 94 ||||||||||||||||||||| Sbjct: 6986 ccacacctcctccctcctcca 6966
>gb|AF512555.1| Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) (ERCC1) gene, complete cds Length = 17285 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 5247 cccacacctcctccctcctcc 5227
>gb|AC105227.6| Homo sapiens chromosome 18, clone RP11-1030E3, complete sequence Length = 185568 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cacccagcctccttttcttta 48 ||||||||||||||||||||| Sbjct: 65663 cacccagcctccttttcttta 65643
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cctcctccactctgccccgct 106 ||||||||||||||||||||| Sbjct: 188391 cctcctccactctgccccgct 188411
>gb|AC013759.6|AC013759 Homo sapiens chromosome 18, clone RP11-2E13, complete sequence Length = 166700 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cacccagcctccttttcttta 48 ||||||||||||||||||||| Sbjct: 131352 cacccagcctccttttcttta 131332
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ccctcctcgccggcgcgctcc 234 ||||||||||||||||||||| Sbjct: 12210232 ccctcctcgccggcgcgctcc 12210212
>gb|AC138512.4| Homo sapiens chromosome 16 clone RP11-93B18, complete sequence Length = 159064 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 cctcctccactctgccccgct 106 ||||||||||||||||||||| Sbjct: 58790 cctcctccactctgccccgct 58770
>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence Length = 38480 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 20241 cccacacctcctccctcctcc 20221
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ccctcctcgccggcgcgctcc 234 ||||||||||||||||||||| Sbjct: 121691 ccctcctcgccggcgcgctcc 121671
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 ccctcctcgccggcgcgctcc 234 ||||||||||||||||||||| Sbjct: 144611 ccctcctcgccggcgcgctcc 144591
>dbj|AK105479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A10, full insert sequence Length = 1440 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ccctcctcgccggcgcgctcc 234 ||||||||||||||||||||| Sbjct: 773 ccctcctcgccggcgcgctcc 793
>gb|AC132369.3| Mus musculus BAC clone RP23-470P10 from 1, complete sequence Length = 161641 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 139918 cccacacctcctccctcctcc 139898 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 136665 cccacacctcctccctcctcc 136645
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 cctcctccactctgccccgct 106 ||||||||||||||||||||| Sbjct: 29044 cctcctccactctgccccgct 29064
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete sequence Length = 222330 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 150536 cccacacctcctccctcctcc 150516
>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by automated sequence analysis) Length = 37314 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 cccacacctcctccctcctcc 93 ||||||||||||||||||||| Sbjct: 19172 cccacacctcctccctcctcc 19192
>ref|XM_524321.1| PREDICTED: Pan troglodytes DNA ligase I (LOC468936), mRNA Length = 4041 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctcctccctcctccactctg 99 |||||||||||||||||||| Sbjct: 3808 ctcctccctcctccactctg 3789
>ref|XM_481654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccggctccggcgggggcgtc 282 |||||||||||||||||||| Sbjct: 425 ccggctccggcgggggcgtc 406
>ref|XM_475885.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 909 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcctcgccggcgcgctccccgccg 240 |||||| ||||||||||||||||| Sbjct: 149 tcctcggcggcgcgctccccgccg 172
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0045D11 map near 50283S, complete sequence Length = 148306 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctcc 234 |||||||||||||||||||| Sbjct: 70860 cctcctcgccggcgcgctcc 70841
>gb|AC161268.5| Mus musculus BAC clone RP23-198F11 from chromosome 16, complete sequence Length = 212995 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctccctcctccactctgc 100 |||||||||||||||||||| Sbjct: 194597 tcctccctcctccactctgc 194616
>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete sequence Length = 202729 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tcctccctcctccactctgc 100 |||||||||||||||||||| Sbjct: 115208 tcctccctcctccactctgc 115189
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcctcgccggcgcgctccccgccg 240 |||||| ||||||||||||||||| Sbjct: 114970 tcctcggcggcgcgctccccgccg 114993
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 5033067 cctcctcgccggcgcgctcgccgc 5033044 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 4446176 cctcctcgccggcgcgctcgccgc 4446199
>gb|AC005531.2| Homo sapiens PAC clone RP4-701O16 from 7, complete sequence Length = 161910 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctccctcctccactctgc 100 |||||||||||||||||||| Sbjct: 30241 tcctccctcctccactctgc 30260
>emb|CR354437.13| Zebrafish DNA sequence from clone DKEY-11D10 in linkage group 23, complete sequence Length = 205907 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 cctcctccctcctccactctgccc 102 ||||||||||||||| |||||||| Sbjct: 125563 cctcctccctcctcctctctgccc 125586
>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence Length = 208096 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ccacacctcctccctcctcc 93 |||||||||||||||||||| Sbjct: 13154 ccacacctcctccctcctcc 13173
>emb|AL596188.6| Human DNA sequence from clone CTA-31J9 on chromosome 6 Contains the 5' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 69676 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctcctccctcctccactct 98 |||||||||||||||||||| Sbjct: 37538 cctcctccctcctccactct 37519
>emb|AL391883.17| Human DNA sequence from clone RP11-91K11 on chromosome 1 Contains the 5' end of the gene for a novel protein (LOC255104), the gene for a novel protein (FLJ20225), a novel gene and the 5' end of the gene for a novel protein (KIAA0459), complete sequence Length = 126371 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gcacccagcctccttttctt 46 |||||||||||||||||||| Sbjct: 7603 gcacccagcctccttttctt 7584
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 gcgcacccagcctccttttcttta 48 ||||||||||||| |||||||||| Sbjct: 20893 gcgcacccagcctgcttttcttta 20916
>emb|AL353579.17| Human DNA sequence from clone RP3-355M6 on chromosome 6 Contains the PIM1 gene for pim-1 oncogene (PIM), a novel gene, the 5' end of the TBC1D22B gene for TBC1D22B and a CpG island, complete sequence Length = 134010 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gcgccctcctcgccggcgcgctcc 234 ||||||||| |||||||||||||| Sbjct: 26597 gcgccctccccgccggcgcgctcc 26620
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 97521 cctcctcgccggcgcgctcgccgc 97498
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 caccacccacacctcctccc 87 |||||||||||||||||||| Sbjct: 217959 caccacccacacctcctccc 217978
>gb|AF527418.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1) gene, complete cds Length = 56408 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctcctccctcctccactctg 99 |||||||||||||||||||| Sbjct: 55196 ctcctccctcctccactctg 55177
>emb|BX324190.13| Zebrafish DNA sequence from clone CH211-220I18 in linkage group 23, complete sequence Length = 217060 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 cctcctccctcctccactctgccc 102 ||||||||||||||| |||||||| Sbjct: 68613 cctcctccctcctcctctctgccc 68636
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 136640 cctcctcgccggcgcgctcgccgc 136663
>gb|AC010458.6| Homo sapiens chromosome 19 clone CTD-2265M8, complete sequence Length = 105788 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ctcctccctcctccactctg 99 |||||||||||||||||||| Sbjct: 14815 ctcctccctcctccactctg 14796
>gb|DQ067482.1| Tarsius syrichta msh homeobox 1-like protein (MSX1) gene, exon 1 and partial cds Length = 477 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 gcctggcgccctcctcgccggcgc 229 ||||||||||||||||| |||||| Sbjct: 134 gcctggcgccctcctcggcggcgc 111
>gb|AF386792.1|AF386792 Homo sapiens proto-oncogene PIM1 (PIM1) gene, exons 1 through 4 and partial cds Length = 3183 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gcgccctcctcgccggcgcgctcc 234 ||||||||| |||||||||||||| Sbjct: 718 gcgccctccccgccggcgcgctcc 741
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 aagcagatccaagcagagtgagca 144 ||||||| |||||||||||||||| Sbjct: 88104 aagcagacccaagcagagtgagca 88127
>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence Length = 167272 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ctcctccctcctccactctg 99 |||||||||||||||||||| Sbjct: 33612 ctcctccctcctccactctg 33631
>gb|AY707154.1| Fusarium lateritium Clade IIA strain FRC L-405 beta-tubulin (benA) gene, partial cds Length = 694 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tgagctgccgtgctacttca 69 |||||||||||||||||||| Sbjct: 19 tgagctgccgtgctacttca 38
>gb|AY707138.1| Fusarium lateritium Clade IIA strain FRC L-81 beta-tubulin (benA) gene, partial cds Length = 699 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 tgagctgccgtgctacttca 69 |||||||||||||||||||| Sbjct: 24 tgagctgccgtgctacttca 43
>gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, region 97B2-97B9, BAC clone BACR48G23, complete sequence Length = 166543 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cttcaccacccacacctcct 84 |||||||||||||||||||| Sbjct: 162842 cttcaccacccacacctcct 162861
>dbj|AK037001.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930034P14 product:IMPORTIN BETA-2 SUBUNIT (KARYOPHERIN BETA-2 SUBUNIT) (TRANSPORTIN) (M9 REGION INTERACTION PROTEIN) (MIP) homolog [Homo sapiens], full insert sequence Length = 3128 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 agcaagcagatccaagcagagtgagcag 145 |||||||||| |||| |||||||||||| Sbjct: 1879 agcaagcagagccaaccagagtgagcag 1906
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctcc 234 |||||||||||||||||||| Sbjct: 13938023 cctcctcgccggcgcgctcc 13938004
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccggctccggcgggggcgtc 282 |||||||||||||||||||| Sbjct: 14486892 ccggctccggcgggggcgtc 14486911
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 tcctcgccggcgcgctccccgccg 240 |||||| ||||||||||||||||| Sbjct: 27402513 tcctcggcggcgcgctccccgccg 27402536
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 5032282 cctcctcgccggcgcgctcgccgc 5032259 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 4446291 cctcctcgccggcgcgctcgccgc 4446314
>emb|BX829387.1|CNS09YYF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1256 Score = 40.1 bits (20), Expect = 3.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 174 gatgcacgccaagacggactcggaggtgaccagcct 209 ||||||||||||||| ||||| ||||||| ||||| Sbjct: 59 gatgcacgccaagaccgactcccaggtgacaagcct 94
>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone BACR13P17, complete sequence Length = 170403 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cttcaccacccacacctcct 84 |||||||||||||||||||| Sbjct: 22345 cttcaccacccacacctcct 22364
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 cctcctcgccggcgcgctccccgc 238 ||||||||||||||||||| |||| Sbjct: 51468 cctcctcgccggcgcgctcgccgc 51491
>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence Length = 200650 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 agcaagcagatccaagcagagtgagcag 145 |||||||||| |||| |||||||||||| Sbjct: 52783 agcaagcagagccaaccagagtgagcag 52756
>gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, complete sequence Length = 181663 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgcacccagcctccttttct 45 |||||||||||||||||||| Sbjct: 65099 cgcacccagcctccttttct 65118
>gb|AC129918.10| Homo sapiens chromosome 8, clone CTD-2132E17, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 caccacccacacctcctccc 87 |||||||||||||||||||| Sbjct: 57565 caccacccacacctcctccc 57584
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 221 cgccggcgcgctccccgccgcgggcggccgcc 252 ||||||||||| ||||||||||||| |||||| Sbjct: 3374703 cgccggcgcgc-ccccgccgcgggccgccgcc 3374733 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cggcgcgctccccgccgcgg 243 |||||||||||||||||||| Sbjct: 2200080 cggcgcgctccccgccgcgg 2200099 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ggcgccctcctcgccggcgc 229 |||||||||||||||||||| Sbjct: 818374 ggcgccctcctcgccggcgc 818355 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 cctcgccggcgcgctccccgccgc 241 |||||||||||||||| ||||||| Sbjct: 287163 cctcgccggcgcgctcgccgccgc 287140
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccggctccggcgggggcgtc 282 |||||||||||||||||||| Sbjct: 81760 ccggctccggcgggggcgtc 81779
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccggctccggcgggggcgtc 282 |||||||||||||||||||| Sbjct: 131175 ccggctccggcgggggcgtc 131194
>gb|AC003012.1|AC003012 Human PAC clone RP1-169K13, complete sequence Length = 104810 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cacccagcctccttttcttt 47 |||||||||||||||||||| Sbjct: 98661 cacccagcctccttttcttt 98642
>dbj|AK069996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040B08, full insert sequence Length = 1502 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cctcctcgccggcgcgctcc 234 |||||||||||||||||||| Sbjct: 309 cctcctcgccggcgcgctcc 328
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cttcaccacccacacctcct 84 |||||||||||||||||||| Sbjct: 266602 cttcaccacccacacctcct 266621
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cctcctcgccggcgcgctcc 234 |||||||||||||||||||| Sbjct: 14020025 cctcctcgccggcgcgctcc 14020006
>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete sequence Length = 216812 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 agcaagcagatccaagcagagtgagcag 145 |||||||||| |||| |||||||||||| Sbjct: 170222 agcaagcagagccaaccagagtgagcag 170195
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ggcggccgccaacaacaacgccgg 266 ||||||||||| |||||||||||| Sbjct: 2001091 ggcggccgccagcaacaacgccgg 2001068
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccacacctcctccctcctcc 93 |||||||||||||||||||| Sbjct: 43795 ccacacctcctccctcctcc 43776
>gb|M27903.1|HUMPIM1A Human pim-1 proto-oncogene gene, complete cds Length = 6113 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gcgccctcctcgccggcgcgctcc 234 ||||||||| |||||||||||||| Sbjct: 718 gcgccctccccgccggcgcgctcc 741
>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete sequence Length = 236344 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 agcaagcagatccaagcagagtgagcag 145 |||||||||| |||| |||||||||||| Sbjct: 1804 agcaagcagagccaaccagagtgagcag 1831
>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete sequence Length = 220050 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 agcaagcagatccaagcagagtgagcag 145 |||||||||| |||| |||||||||||| Sbjct: 76201 agcaagcagagccaaccagagtgagcag 76174
>gb|M34228.1|HUMPIM1B Human protein kinase (Pim-1) promoter DNA Length = 1737 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gcgccctcctcgccggcgcgctcc 234 ||||||||| |||||||||||||| Sbjct: 1669 gcgccctccccgccggcgcgctcc 1692 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,247,462 Number of Sequences: 3902068 Number of extensions: 3247462 Number of successful extensions: 74895 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73539 Number of HSP's gapped (non-prelim): 1356 length of query: 300 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 278 effective length of database: 17,147,199,772 effective search space: 4766921536616 effective search space used: 4766921536616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
