>Y4466_ARATH (Q9SB61) ZF-HD homeobox protein At4g24660 (AtHB-22)|
          Length = 220

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
 Frame = +1

Query: 109 KYKECMRNHAAAMGGQAFDGCGEYMPASP----DSLKCAACGCHRSFHRRAGSLTGG 267
           +Y+EC++NHA  +GG A DGC E+MP+      D+LKCAACGCHR+FHR+     GG
Sbjct: 48  RYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGG 104

>Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410|
          Length = 279

 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 29/50 (58%), Positives = 40/50 (80%), Gaps = 4/50 (8%)
 Frame = +1

Query: 109 KYKECMRNHAAAMGGQAFDGCGEYMPA----SPDSLKCAACGCHRSFHRR 246
           +++EC++N A  +GG A DGCGE+MPA    + D+LKCAACGCHR+FHR+
Sbjct: 74  RFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRK 123

>COLL_DROME (P56721) Transcription factor collier (Transcription factor knot)|
          Length = 575

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -1

Query: 87  SAASLVGHQAQVIHHVRTRARPHHH 13
           SA S   HQA V HH    A PHHH
Sbjct: 530 SAVSSTWHQAFVQHHHAATAHPHHH 554

>ODP2_HAEIN (P45118) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 567

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 68  PTREAAEPGATPGPSTRSACATTRLPWAARPSTAA 172
           P   A+ P +T  P T +   T + P AA P T A
Sbjct: 187 PAESASAPASTSAPQTAAPATTAQAPQAAAPDTTA 221

>ALF_TRYBB (P07752) Fructose-bisphosphate aldolase, glycosomal (EC 4.1.2.13)|
          Length = 371

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 195 RRGRHVLPAAVEGLAAHGSRVVAHALLVLGPGVAPGSAASLVGHQAQVIHH-VRTRAR 25
           R  +HV    V  L  HG  VV    L+    V PG+ + L GH  QV  + V+T AR
Sbjct: 213 RVSQHVWSEVVSALHRHG--VVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLAR 268

>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 68  PTREAAEPGATPGPSTRSA-CATTRLPWAARPSTAAG 175
           P   AA PGATPG +T SA  A+T  P A+  + + G
Sbjct: 33  PPPSAASPGATPGSATASAERASTAAPVASPAAPSPG 69

>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)|
          Length = 646

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 15  GGGGELSCGHDGSPEPGA 68
           GGGG   C + GSP PGA
Sbjct: 281 GGGGRPGCAYPGSPGPGA 298

>ZN533_MOUSE (Q8BXJ8) Zinc finger protein 533|
          Length = 482

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 89  PGATPGPSTRSACATTRLPWAARPST 166
           PG  P  ST SAC TT LP   R  T
Sbjct: 88  PGPGPNTSTGSACHTTTLPALVRTPT 113

>CT062_HUMAN (Q4KN68) Protein C20orf62|
          Length = 170

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 200 ESGEAGMYSPQPSKAWPPMAAAWLRMH 120
           ES   G+YSP P   W P A ++   H
Sbjct: 15  ESPHPGVYSPHPQGGWQPTADSYREWH 41

>RECO_NOCFA (Q5YZU4) DNA repair protein recO (Recombination protein O)|
          Length = 256

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 178 YMPASPDSLKCAACGCHRSFHRRAGSLTGGAC 273
           + PA  +  KCA  G HR+FH  AG   G  C
Sbjct: 149 WAPALDECAKCATPGPHRAFHVAAG---GAVC 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,193,921
Number of Sequences: 219361
Number of extensions: 782757
Number of successful extensions: 4116
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4104
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)