>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score =  242 bits (618), Expect = 3e-64
 Identities = 113/134 (84%), Positives = 125/134 (93%)
 Frame = +1

Query: 52  REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 231
           R VPGSYG+PFVSA+RDRLDFYY QGQDKYFESR E+YGSTVVRINVPPGPFMARDPRVV
Sbjct: 10  RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFMARDPRVV 69

Query: 232 AVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSL 411
           A+LDAKSFPVLFDV KVEK+++FTGT+MPSTSLTGG+RVC+YLDPSEP H K+KQLL SL
Sbjct: 70  ALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSL 129

Query: 412 LASRKDAFIPAFRS 453
           L SRKDAF+P FRS
Sbjct: 130 LVSRKDAFVPVFRS 143

>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score =  202 bits (515), Expect = 3e-52
 Identities = 92/143 (64%), Positives = 122/143 (85%)
 Frame = +1

Query: 28  SDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPF 207
           SDE +L  R++PG YGLP +  I+DRLD++Y QG++++F+SR++KY STV R N+PPGPF
Sbjct: 65  SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPF 124

Query: 208 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTK 387
           +A +PRV+ +LDAKSFPVLFD++KVEKK+LFTGTYMPST LTGG+R+ SYLDPSEP HTK
Sbjct: 125 IASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTK 184

Query: 388 VKQLLFSLLASRKDAFIPAFRST 456
           +KQLLF+L+ +R+D  IP F S+
Sbjct: 185 LKQLLFNLIKNRRDYVIPEFSSS 207

>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score =  188 bits (477), Expect = 7e-48
 Identities = 87/144 (60%), Positives = 112/144 (77%)
 Frame = +1

Query: 25  RSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGP 204
           R+    L  R +PG+YGLP V  I+DR D++Y QG +++F+SR+ KY STV R+N+PPG 
Sbjct: 46  RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGA 105

Query: 205 FMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHT 384
           F+A +P+VVA+LD KSFPVLFDV KVEKK+LFTGTYMPST LTGG+R+ SYLDPSEP H 
Sbjct: 106 FIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHE 165

Query: 385 KVKQLLFSLLASRKDAFIPAFRST 456
           K+K LLF LL S ++   P F++T
Sbjct: 166 KLKNLLFFLLKSSRNRIFPEFQAT 189

>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score =  182 bits (463), Expect = 3e-46
 Identities = 85/143 (59%), Positives = 112/143 (78%), Gaps = 1/143 (0%)
 Frame = +1

Query: 31  DEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPF 207
           D  S   RE+PGSYG+PF   I+DRL+++Y  G +D+YF SR++KY STV R N+PPGPF
Sbjct: 2   DPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPF 61

Query: 208 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTK 387
           ++ +P+V+ +LDAKSFP+LFDV+KVEKK+LFTGTYMPST LTG +RV SYLDPSEP H +
Sbjct: 62  VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYLDPSEPRHAQ 121

Query: 388 VKQLLFSLLASRKDAFIPAFRST 456
           +K LLF +L +  +  IP F +T
Sbjct: 122 LKNLLFFMLKNSSNRVIPQFETT 144

>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score =  174 bits (442), Expect = 9e-44
 Identities = 85/134 (63%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
 Frame = +1

Query: 52  REVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 228
           R+VPG YG P V AIRDR +++Y  G +D +F +RV  + STVVR+N+PPGPF+ARDPRV
Sbjct: 48  RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRV 107

Query: 229 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFS 408
           VA+LDA SFPVLFD + V+K +LFTGT+MPST LTGG+RV SYLDPSEP H  +K LLF 
Sbjct: 108 VALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFY 167

Query: 409 LLASRKDAFIPAFR 450
           LL+ R+   IP FR
Sbjct: 168 LLSHRRQQVIPKFR 181

>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score =  164 bits (415), Expect = 1e-40
 Identities = 76/147 (51%), Positives = 110/147 (74%), Gaps = 1/147 (0%)
 Frame = +1

Query: 16  GMARSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINV 192
           G ++     L+ RE+PG YG+PF+S +RDRLD+YYFQG D++F SRV ++G +TV+R+N+
Sbjct: 18  GQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNM 77

Query: 193 PPGPFMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSE 372
           PPGPF+A DPRVVA+LDA+SF VL D + V+K +   GT+MPS +L GG R  ++LD ++
Sbjct: 78  PPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLDAAD 137

Query: 373 PTHTKVKQLLFSLLASRKDAFIPAFRS 453
           P H K+K+++ SL A+R     PAFR+
Sbjct: 138 PRHAKIKRVVMSLAAARMHHVAPAFRA 164

>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score =  157 bits (396), Expect = 2e-38
 Identities = 72/135 (53%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = +1

Query: 52  REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINVPPGPFMARDPRV 228
           RE+PG YG+PF S +RDRLD++YFQG ++YF SRV ++G +TV+R+N+PPGPF++ +PRV
Sbjct: 30  REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGNPRV 89

Query: 229 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFS 408
           VA+LDA+SF VL D + V+K +   GTYMPS +L GG R  ++LD ++P H K+K+++ S
Sbjct: 90  VALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMS 149

Query: 409 LLASRKDAFIPAFRS 453
           L A+R     PAFR+
Sbjct: 150 LAAARMHHVAPAFRA 164

>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 265

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 49  PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 228
           P ++  SY     S +    D Y+FQG D Y +   E     V+R +    P+   + RV
Sbjct: 76  PADIAVSYEFGGASCLSVLTDMYFFQGSDAYLQQAREACTLPVLRKDFTVDPYQVYEARV 135

Query: 229 V 231
           +
Sbjct: 136 L 136

>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)|
           (CYPCCCXIIIA1)
          Length = 492

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 55  EVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 231
           ++PG  GLP + +  + +  Y  + +  +    + KYGST++    P    + RDP+VV
Sbjct: 31  KIPGPIGLPILGSSLENIITY--KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVV 87

>CTLA4_CANFA (Q9XSI1) Cytotoxic T-lymphocyte protein 4 precursor (Cytotoxic|
           T-lymphocyte-associated antigen 4) (CTLA-4) (CD152
           antigen)
          Length = 223

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -1

Query: 293 FFFSTLVTSKSTGKLLASSTATTRGSRAMKGPGGTLMRTTVEPYF 159
           FF+S L+T+ S  K+L   +  T G      P G       +PYF
Sbjct: 175 FFYSFLITAVSLSKMLKKRSPLTTGVYVKMPPTGPECEKQFQPYF 219

>SPC34_SCHPO (O14285) DASH complex subunit spc34 (Outer kinetochore protein|
           spc34)
          Length = 164

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 82  FVSAIRDRLDFYYFQGQDKYFESRVEKY 165
           +V+ I + LD Y  QG  +Y E+ VEKY
Sbjct: 75  YVACIEELLDIYPMQGGREYLETLVEKY 102

>MCM6_ANOGA (Q7Q0Q1) DNA replication licensing factor Mcm6|
          Length = 814

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
 Frame = +1

Query: 208 MARDPRVVAVLDAKSFPVLFDVTKVEKK---NLFTG---TYMPSTSLTGGFRVCSYLDPS 369
           M+RDPR+   L    FP ++   +V++     LF G   T    T+L G   VC   DPS
Sbjct: 333 MSRDPRLYQNLINSLFPSIYGNDEVKRGILLMLFGGVAKTTQEKTTLRGDINVCIVGDPS 392

Query: 370 EPTHTKVKQL 399
                 +KQ+
Sbjct: 393 TAKSQFLKQV 402

>GBRB3_DROME (Q08832) Gamma-aminobutyric-acid receptor beta-like subunit|
           precursor (GABA(A) receptor)
          Length = 496

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +1

Query: 67  SYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVVAVLDA 246
           +YG+ F + +   +D +Y+    +     +E YG TV  + +   P   R    V   + 
Sbjct: 165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRG---VEDAEL 221

Query: 247 KSFPVLFDVTKVEKKNLFTGTY 312
             F ++   T   K+ L TG Y
Sbjct: 222 PQFTIIGYETNDRKERLATGVY 243

>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)|
          Length = 472

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 61  PGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGS 171
           PGS GLP +      +  Y  +  + + + RV +YGS
Sbjct: 33  PGSLGLPLIGETFQLIGAYKTENPEPFIDERVARYGS 69

>SYL_SYNY3 (P73274) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 869

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 271 VTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRK 426
           V  +  KN  TG Y+P+  L  G +V    DP +P   +  Q+ +  ++  K
Sbjct: 576 VQGITYKNPTTGKYVPAKDLQTGQQVIDPKDPKDPDSGEPLQVFYEKMSKSK 627

>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S
           rRNA m2U2552 methyltransferase)
          Length = 268

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%)
 Frame = +1

Query: 97  RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 210
           RDR D+YY Q +++ + SR             V K G +VV +   PG ++
Sbjct: 3   RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53

>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S
           rRNA m2U2552 methyltransferase)
          Length = 272

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%)
 Frame = +1

Query: 97  RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 210
           RDR D+YY Q +++ + SR             V K G +VV +   PG ++
Sbjct: 3   RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53

>HEM1_METCA (Q60A20) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 420

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 479 RRCEQRGEVERKAGMKASLREARREKSSCLTLVWV 375
           R   ++ E+ R A ++ +LRE RR KS+  TL W+
Sbjct: 344 RDVRRQAELHRDAALQRALRELRRGKSAEDTLRWL 378

>TRPC_XYLFT (Q87EX2) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 264

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 49  PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 228
           P E+  SY L   S +    D ++F+G D Y     +     V+R +    P+   + RV
Sbjct: 76  PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135

Query: 229 V 231
           +
Sbjct: 136 L 136

>TRPC_XYLFA (Q9PGT5) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 264

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 49  PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 228
           P E+  SY L   S +    D ++F+G D Y     +     V+R +    P+   + RV
Sbjct: 76  PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135

Query: 229 V 231
           +
Sbjct: 136 L 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,360,212
Number of Sequences: 219361
Number of extensions: 609338
Number of successful extensions: 2189
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2184
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)