ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 291 bits (147), Expect = 1e-75 Identities = 252/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Plus Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 65 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 124 Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 125 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 181 Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 182 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 241 Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 242 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 301 Query: 421 tctacggcgccgactggngctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 302 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 349
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 291 bits (147), Expect = 1e-75 Identities = 252/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Minus Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 33194679 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 33194620 Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 33194619 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 33194563 Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 33194562 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 33194503 Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 33194502 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 33194443 Query: 421 tctacggcgccgactggngctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 33194442 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 33194395 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgt 388 ||||||||||||||||||||| Sbjct: 26377205 cctgcgccccggcgacgccgt 26377225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 13217038 cgcaaaaaccctagccagct 13217019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggcgctgccgccggtgcgcc 207 |||||||||||||||||||| Sbjct: 9052561 ggcgctgccgccggtgcgcc 9052580
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 291 bits (147), Expect = 1e-75 Identities = 252/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Minus Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 131589 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 131530 Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 131529 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 131473 Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 131472 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 131413 Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 131412 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 131353 Query: 421 tctacggcgccgactggngctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 131352 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 131305
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 291 bits (147), Expect = 1e-75 Identities = 252/288 (87%), Gaps = 12/288 (4%) Strand = Plus / Plus Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240 |||||||||||||||| |||||||||| |||||||||| | |||||| ||| Sbjct: 315 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 374 Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300 |||||||||| ||||||||||||||||| || |||| ||| |||||| ||||| | Sbjct: 375 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 431 Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360 ||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||| Sbjct: 432 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 491 Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 492 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 551 Query: 421 tctacggcgccgactggngctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 552 tctacggcgccgactggggctccatccccgtctccgtctccgacgacg 599
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 276 bits (139), Expect = 6e-71 Identities = 177/190 (93%) Strand = Plus / Plus Query: 281 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65462 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 65521 Query: 341 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 65522 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 65581 Query: 401 cgtgcgccccacctccgtcctctacggcgccgactggngctccatccccgtctccgtcgc 460 ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 65582 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 65641 Query: 461 cgacgacgac 470 |||||||||| Sbjct: 65642 cgacgacgac 65651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 194 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 65369 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 65428 Query: 254 cttcttctcctcgctggc 271 |||||||||||||||||| Sbjct: 65429 cttcttctcctcgctggc 65446
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 276 bits (139), Expect = 6e-71 Identities = 177/190 (93%) Strand = Plus / Plus Query: 281 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24551280 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 24551339 Query: 341 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 24551340 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 24551399 Query: 401 cgtgcgccccacctccgtcctctacggcgccgactggngctccatccccgtctccgtcgc 460 ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 24551400 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 24551459 Query: 461 cgacgacgac 470 |||||||||| Sbjct: 24551460 cgacgacgac 24551469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 194 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 24551187 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 24551246 Query: 254 cttcttctcctcgctggc 271 |||||||||||||||||| Sbjct: 24551247 cttcttctcctcgctggc 24551264
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full insert sequence Length = 1118 Score = 276 bits (139), Expect = 6e-71 Identities = 177/190 (93%) Strand = Plus / Plus Query: 281 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 305 Query: 341 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400 |||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 306 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 365 Query: 401 cgtgcgccccacctccgtcctctacggcgccgactggngctccatccccgtctccgtcgc 460 ||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 366 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 425 Query: 461 cgacgacgac 470 |||||||||| Sbjct: 426 cgacgacgac 435 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 194 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253 ||||||||||||||| |||| ||| ||||||| ||||||||||| ||||||||| | Sbjct: 153 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 212 Query: 254 cttcttctcctcgctggc 271 |||||||||||||||||| Sbjct: 213 cttcttctcctcgctggc 230
>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence Length = 1322 Score = 252 bits (127), Expect = 9e-64 Identities = 222/254 (87%) Strand = Plus / Plus Query: 213 gcggggcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggcc 272 |||| ||||||||| ||||||||||||| || ||||||| ||||||||||||||| ||| Sbjct: 218 gcggcgcaggcggccgcgatccagccctcgtccccgcgcttcttcttctcctcgcttgcc 277 Query: 273 ggcaaggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgag 332 || | || | |||||| ||||| ||||||||||||||||| || |||||||||||| Sbjct: 278 gggaccaacccggcctccccgcaccgtcgcatcgccatcgccgttgatctctccgacgag 337 Query: 333 tccgccttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtg 392 ||||||||||| || |||||||||||||||||| | |||||||| |||||||||||| Sbjct: 338 tccgccttcgcagtcaagtgggccgtgcagaactacgtccgccccggggacgccgtcgtg 397 Query: 393 ctcctccacgtgcgccccacctccgtcctctacggcgccgactggngctccatccccgtc 452 || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 398 ctgctccacgtgcgccccacctccgtcctctacggcgccgactggggttccatcccggtc 457 Query: 453 tccgtcgccgacga 466 |||||||| ||||| Sbjct: 458 tccgtcgctgacga 471
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 218 bits (110), Expect = 1e-53 Identities = 214/249 (85%) Strand = Plus / Minus Query: 218 gcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggccggcaa 277 ||||||||| | ||||||||||| || ||||||| ||||||||||||||| | ||| | Sbjct: 4942 gcaggcggccgcaatccagccctcttccccgcgcttcttcttctcctcgcttgtcgggac 4883 Query: 278 ggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgc 337 || | |||||| ||||| |||||||||||||||| || ||| |||||||||||| Sbjct: 4882 caacccggcctccccgcaccgtcgcatcgccatcgccgctgatctcaacgacgagtccgc 4823 Query: 338 cttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcct 397 |||||| || |||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 4822 cttcgcagtcaagtgggccgtgcagaactacctccgccccggggacgccgtcgtgctgct 4763 Query: 398 ccacgtgcgccccacctccgtcctctacggcgccgactggngctccatccccgtctccgt 457 ||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 4762 ccatgtgcgccccacctccgtcctctacggcgccgactggggctccatcccggtctccgt 4703 Query: 458 cgccgacga 466 ||| ||||| Sbjct: 4702 cgctgacga 4694
>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence Length = 1258 Score = 200 bits (101), Expect = 3e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 293 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctg 352 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 982 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctacgccgtgcgctg 923 Query: 353 ggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccac 412 |||||| |||||||| |||||||| ||||||||| | || ||||||||||||||||| Sbjct: 922 ggccgtcgccaactacctccgccccggggacgccgtcatcctgctccacgtgcgccccac 863 Query: 413 ctccgtcctctacggcgccgactgg 437 |||||| |||||||||||||||||| Sbjct: 862 ctccgtgctctacggcgccgactgg 838
>ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1330 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Plus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1352 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Plus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Minus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 21844767 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 21844708 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 21844707 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 21844648 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 21844647 tccgtgctctacggcgccgactggggctcc 21844618 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 25783338 cgcaaaaaccctagccagct 25783319
>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full insert sequence Length = 1351 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Plus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full insert sequence Length = 1330 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Plus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 157 bits (79), Expect = 4e-35 Identities = 132/150 (88%) Strand = Plus / Minus Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353 ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||| Sbjct: 58443 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 58384 Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413 ||||| |||||||| |||||||| |||||||| | || || ||||| ||||||||| Sbjct: 58383 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 58324 Query: 414 tccgtcctctacggcgccgactggngctcc 443 ||||| |||||||||||||||||| ||||| Sbjct: 58323 tccgtgctctacggcgccgactggggctcc 58294
>gb|AY104155.1| Zea mays PCO077380 mRNA sequence Length = 1011 Score = 119 bits (60), Expect = 9e-24 Identities = 77/83 (92%) Strand = Plus / Plus Query: 384 gccgtcgtgctcctccacgtgcgccccacctccgtcctctacggcgccgactggngctcc 443 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||| Sbjct: 12 gccgtcgtgctgctccacgtgcgccccacctccgttctctacggcgccgactggggttcc 71 Query: 444 atccccgtctccgtcgccgacga 466 ||||| ||||||||||| ||||| Sbjct: 72 atcccggtctccgtcgctgacga 94
>gb|AY665904.1| Physalis minima isolate PMINM 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 633 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 cccctccccgtcggccggcggt 173 |||||||||||||||||||||| Sbjct: 85 cccctccccgtcggccggcggt 106
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 cgatccagccctcctcgccgcg 250 |||||||||||||||||||||| Sbjct: 22160494 cgatccagccctcctcgccgcg 22160515
>dbj|AK065586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034O12, full insert sequence Length = 3418 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 cgatccagccctcctcgccgcg 250 |||||||||||||||||||||| Sbjct: 67 cgatccagccctcctcgccgcg 88
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 cgatccagccctcctcgccgcg 250 |||||||||||||||||||||| Sbjct: 22088839 cgatccagccctcctcgccgcg 22088860
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 cgatccagccctcctcgccgcg 250 |||||||||||||||||||||| Sbjct: 92516 cgatccagccctcctcgccgcg 92495
>ref|NM_185697.1| Oryza sativa (japonica cultivar-group), Ozsa8048 predicted mRNA Length = 2760 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 2325 ctccatccccgtctccgtctccggcgacg 2353
>ref|NM_185687.1| Oryza sativa (japonica cultivar-group), Ozsa8038 predicted mRNA Length = 2760 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 2325 ctccatccccgtctccgtctccggcgacg 2353
>ref|XM_471059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 ccgtctccgtcgccgacgacg 468 ||||||||||||||||||||| Sbjct: 25 ccgtctccgtcgccgacgacg 5
>ref|NM_192393.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cctgcgccccggcgacgccgt 388 ||||||||||||||||||||| Sbjct: 1264 cctgcgccccggcgacgccgt 1244
>ref|XM_532850.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 1 (LOC475637), mRNA Length = 8193 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 gcaggcggcgacgatccagccctcctcgc 246 |||||||||| || ||||||||||||||| Sbjct: 2158 gcaggcggcgccggtccagccctcctcgc 2130
>ref|XM_852730.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 3 (LOC475637), mRNA Length = 8328 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 gcaggcggcgacgatccagccctcctcgc 246 |||||||||| || ||||||||||||||| Sbjct: 2293 gcaggcggcgccggtccagccctcctcgc 2265
>ref|XM_852690.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3, transcript variant 2 (LOC475637), mRNA Length = 8508 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 gcaggcggcgacgatccagccctcctcgc 246 |||||||||| || ||||||||||||||| Sbjct: 2521 gcaggcggcgccggtccagccctcctcgc 2493
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 203 gcgcctcgcggcggggcaggcggcgacga 231 |||| |||||||| ||||||||||||||| Sbjct: 181808 gcgcatcgcggcgcggcaggcggcgacga 181836
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 gcaggcggcgacgatccagccctcc 242 |||||||| |||||||||||||||| Sbjct: 1397567 gcaggcggtgacgatccagccctcc 1397543
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 gtgacgtgccgaccccggcgc 192 ||||||||||||||||||||| Sbjct: 18747 gtgacgtgccgaccccggcgc 18767
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ccgtctccgtcgccgacgacg 468 ||||||||||||||||||||| Sbjct: 1089281 ccgtctccgtcgccgacgacg 1089301
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 3871782 ctccatccccgtctccgtctccggcgacg 3871754 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 3833726 ctccatccccgtctccgtctccggcgacg 3833698
>gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 of the complete genome Length = 11244 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ccgaccccggcgctgccgccg 200 ||||||||||||||||||||| Sbjct: 615 ccgaccccggcgctgccgccg 595
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgt 388 ||||||||||||||||||||| Sbjct: 51070 cctgcgccccggcgacgccgt 51090
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 129736 ctccatccccgtctccgtctccggcgacg 129708 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 440 ctccatccccgtctccgtcgccgacgacg 468 ||||||||||||||||||| ||| ||||| Sbjct: 91680 ctccatccccgtctccgtctccggcgacg 91652
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 cgctgccgccggtgcgcctcgcggc 214 ||||||||||||||||| ||||||| Sbjct: 1709107 cgctgccgccggtgcgcatcgcggc 1709131
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ccgtctccgtcgccgacgacg 468 ||||||||||||||||||||| Sbjct: 517349 ccgtctccgtcgccgacgacg 517369
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07, complete sequence Length = 167895 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ccgtctccgtcgccgacgacg 468 ||||||||||||||||||||| Sbjct: 31650 ccgtctccgtcgccgacgacg 31670
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 cgaccccggcgctgccgccg 200 |||||||||||||||||||| Sbjct: 236712 cgaccccggcgctgccgccg 236731
>ref|XM_464429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
>ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453H10.33 mRNA Length = 994 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cccggcgacgccgtcgtgct 394 |||||||||||||||||||| Sbjct: 18701 cccggcgacgccgtcgtgct 18720
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccggcgctgccgccggtgcg 205 |||||||||||||||||||| Sbjct: 2097685 ccggcgctgccgccggtgcg 2097704
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctacctgcgccccggcgacg 384 |||||||||||||||||||| Sbjct: 2906396 ctacctgcgccccggcgacg 2906377
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 73508 cgcaaaaaccctagccagct 73527
>ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 protein (LOC424161), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gggccgtgcagaactacctg 371 |||||||||||||||||||| Sbjct: 2331 gggccgtgcagaactacctg 2312
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 163 cggccggcggtgacgtgccgaccccggcgctg 194 ||||||||||||||| || | ||||||||||| Sbjct: 3714224 cggccggcggtgacgagcaggccccggcgctg 3714193
>gb|BC044179.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:55477 IMAGE:2640312), complete cds Length = 2292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cggccaactccaacccctcc 158 |||||||||||||||||||| Sbjct: 169 cggccaactccaacccctcc 188
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 ctacctgcgccccggcgacgccgt 388 ||||||||||||||||||| |||| Sbjct: 2585057 ctacctgcgccccggcgacaccgt 2585034
>gb|BC067543.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2, mRNA (cDNA clone MGC:85610 IMAGE:6523980), complete cds Length = 2352 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cggccaactccaacccctcc 158 |||||||||||||||||||| Sbjct: 166 cggccaactccaacccctcc 185
>emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on chromosome 11 Contains the 3' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 153658 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 agccagctgcccagctcccc 134 |||||||||||||||||||| Sbjct: 93995 agccagctgcccagctcccc 93976
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 gcgccccggcgacgccgtcgtgct 394 |||||||| ||||||||||||||| Sbjct: 29999 gcgccccgtcgacgccgtcgtgct 29976
>ref|NM_213496.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated protein 2 (prpsap2), mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cggccaactccaacccctcc 158 |||||||||||||||||||| Sbjct: 166 cggccaactccaacccctcc 185
>gb|AE005727.1| Caulobacter crescentus CB15 section 53 of 359 of the complete genome Length = 10545 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ccgccttcgccgtgcgctgg 353 |||||||||||||||||||| Sbjct: 5837 ccgccttcgccgtgcgctgg 5856
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cccggcgctgccgccggtgc 204 |||||||||||||||||||| Sbjct: 838360 cccggcgctgccgccggtgc 838341
>ref|NM_164719.1| Drosophila melanogaster CG32829-RA (CG32829), mRNA Length = 705 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 235 agccctcctcgccgcgctacttcttctcctcg 266 |||||| ||||||| ||| ||||||||||||| Sbjct: 655 agcccttctcgccgtgctccttcttctcctcg 624
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 235 agccctcctcgccgcgctacttcttctcctcg 266 |||||| ||||||| ||| ||||||||||||| Sbjct: 57091 agcccttctcgccgtgctccttcttctcctcg 57060
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3, complete sequence Length = 195436 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cggccaactccaacccctcc 158 |||||||||||||||||||| Sbjct: 15599 cggccaactccaacccctcc 15580
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 325 ccgacgagtccgccttcgccgtgcgctg 352 |||||||| |||||||||||| |||||| Sbjct: 972315 ccgacgaggccgccttcgccgagcgctg 972288
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 10177344 cgcaaaaaccctagccagct 10177363
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 235 agccctcctcgccgcgctacttcttctcctcg 266 |||||| ||||||| ||| ||||||||||||| Sbjct: 22595 agcccttctcgccgtgctccttcttctcctcg 22626
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 5167485 cctgggcctcggcgacgccgacgtgctcctcc 5167454
>gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcctcctcccaccaccgccg 301 |||||||||||||||||||| Sbjct: 96600 gcctcctcccaccaccgccg 96619
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggcgctgccgccggtgcgcc 207 |||||||||||||||||||| Sbjct: 81568 ggcgctgccgccggtgcgcc 81587
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 89339 cgcaaaaaccctagccagct 89320
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 127983 cctgggcctcggcgacgccgacgtgctcctcc 127952
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 60938 cctgggcctcggcgacgccgacgtgctcctcc 60907
>dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127H23, full insert sequence Length = 6225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggcgctgccgccggtgcgcc 207 |||||||||||||||||||| Sbjct: 391 ggcgctgccgccggtgcgcc 372
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 100500 cgcaaaaaccctagccagct 100481
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 actacctgcgccccggcgac 383 |||||||||||||||||||| Sbjct: 2917971 actacctgcgccccggcgac 2917990
>dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E11, full insert sequence Length = 912 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
>dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H06, full insert sequence Length = 994 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399 |||| ||| ||||||||||| ||||||||||| Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 235 agccctcctcgccgcgctacttcttctcctcg 266 |||||| ||||||| ||| ||||||||||||| Sbjct: 159089 agcccttctcgccgtgctccttcttctcctcg 159120
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 cctccccgtcggccggcggtgacg 177 |||| ||||||||||||||||||| Sbjct: 792340 cctcgccgtcggccggcggtgacg 792317
>gb|AF058419.1|HSLRPSS45 Homo sapiens lipoprotein receptor-related protein (LRP1), exons 45 through 55 Length = 3875 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gcctcctcccaccaccgccg 301 |||||||||||||||||||| Sbjct: 3389 gcctcctcccaccaccgccg 3370
>gb|DQ314873.1| Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1) gene, complete cds Length = 88248 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gcctcctcccaccaccgccg 301 |||||||||||||||||||| Sbjct: 69306 gcctcctcccaccaccgccg 69287
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cgccgtcgtgctcctccacg 402 |||||||||||||||||||| Sbjct: 3498554 cgccgtcgtgctcctccacg 3498535
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cgcaaaaaccctagccagct 122 |||||||||||||||||||| Sbjct: 10249041 cgcaaaaaccctagccagct 10249060
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 235 agccctcctcgccgcgctacttcttctcctcg 266 |||||| ||||||| ||| ||||||||||||| Sbjct: 15167 agcccttctcgccgtgctccttcttctcctcg 15136 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,223,740 Number of Sequences: 3902068 Number of extensions: 3223740 Number of successful extensions: 78213 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75447 Number of HSP's gapped (non-prelim): 2754 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
