ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC105982.1| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
2gb|BC105981.1| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
3gb|BC100823.2| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
4gb|BC100822.2| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
5gb|BC022993.1| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
6gb|AY750848.1| Homo sapiens RTN3-A1 (RTN3) mRNA, complete cds 40 1.9
7gb|AY427821.2| Homo sapiens reticulon 3-A (RTN3) mRNA, complete cds 40 1.9
8ref|NM_006054.2| Homo sapiens reticulon 3 (RTN3), transcript var... 40 1.9
9ref|NM_201428.1| Homo sapiens reticulon 3 (RTN3), transcript var... 40 1.9
10ref|NM_201429.1| Homo sapiens reticulon 3 (RTN3), transcript var... 40 1.9
11ref|NM_201430.1| Homo sapiens reticulon 3 (RTN3), transcript var... 40 1.9
12gb|BC010556.1| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
13emb|CR858619.1| Pongo pygmaeus mRNA; cDNA DKFZp459J0533 (from cl... 40 1.9
14emb|CR624616.1| full-length cDNA clone CS0DN005YN11 of Adult bra... 40 1.9
15dbj|AK127079.1| Homo sapiens cDNA FLJ45136 fis, clone BRAWH30383... 40 1.9
16emb|CR619650.1| full-length cDNA clone CS0DF032YB09 of Fetal bra... 40 1.9
17dbj|AK122727.1| Homo sapiens cDNA FLJ16232 fis, clone FEBRA20277... 40 1.9
18dbj|AK094965.1| Homo sapiens cDNA FLJ37646 fis, clone BRHIP20003... 40 1.9
19emb|CR614599.1| full-length cDNA clone CS0DA003YJ09 of Neuroblas... 40 1.9
20emb|CR614083.1| full-length cDNA clone CS0DB007YA13 of Neuroblas... 40 1.9
21emb|CR609823.1| full-length cDNA clone CS0DM001YF17 of Fetal liv... 40 1.9
22emb|CR609229.1| full-length cDNA clone CS0DI006YG09 of Placenta ... 40 1.9
23emb|CR607815.1| full-length cDNA clone CS0DI006YL08 of Placenta ... 40 1.9
24emb|CR606090.1| full-length cDNA clone CS0DH001YM07 of T cells (... 40 1.9
25emb|CR602829.1| full-length cDNA clone CS0DJ003YJ18 of T cells (... 40 1.9
26emb|CR601675.1| full-length cDNA clone CS0DI075YD06 of Placenta ... 40 1.9
27dbj|AK075412.1| Homo sapiens cDNA PSEC0103 fis, clone NT2RP20047... 40 1.9
28emb|CR596154.1| full-length cDNA clone CS0DJ006YD19 of T cells (... 40 1.9
29emb|CR592349.1| full-length cDNA clone CS0DF010YO07 of Fetal bra... 40 1.9
30tpg|BK001685.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A-D8 (... 40 1.9
31tpg|BK001684.1| TPA: TPA_inf: Homo sapiens RTN3-A2 (RTN3) mRNA, ... 40 1.9
32tpg|BK001683.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A3 (RT... 40 1.9
33tpg|BK001682.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A-D5 (... 40 1.9
34tpg|BK001681.1| TPA: TPA_inf: Homo sapiens RTN3-A1 (RTN3) mRNA, ... 40 1.9
35ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, trans... 40 1.9
36ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, trans... 40 1.9
37ref|NG_005175.1| Homo sapiens reticulon protein 3 pseudogene (LO... 40 1.9
38gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA 40 1.9
39gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, r... 40 1.9
40gb|AC079228.7| Homo sapiens BAC clone RP11-142A22 from 4, comple... 40 1.9
41gb|BC011394.1| Homo sapiens reticulon 3, transcript variant 1, m... 40 1.9
42gb|AF218125.1|AF218125 Drosophila melanogaster Kisir mRNA, compl... 40 1.9
43gb|AF059529.1|SEG_HSNSP5 Homo sapiens reticulon gene family prot... 40 1.9
44gb|AF059524.1|AF059524 Homo sapiens reticulon gene family protei... 40 1.9
45gb|AF119297.1|AF119297 Homo sapiens neuroendocrine-specific prot... 40 1.9
46gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21... 40 1.9
47dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 1.9
48gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s... 40 1.9
49dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 1.9
50dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 1.9
51gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 38 7.3
52ref|XM_366954.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 38 7.3
53gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 38 7.3
54gb|AC134332.2| Mus musculus BAC clone RP24-385N13 from chromosom... 38 7.3
55gb|AC159707.2| Mus musculus chromosome 1, clone RP24-176K12, com... 38 7.3
56gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome... 38 7.3
57gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome... 38 7.3
58gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome... 38 7.3
59gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complet... 38 7.3
60gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 38 7.3
61gb|AE008818.1| Salmonella typhimurium LT2, section 122 of 220 of... 38 7.3
62emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 38 7.3
63gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 38 7.3
64gb|AC006473.4| Homo sapiens chromosome 17, clone RP11-203M16, co... 38 7.3
65dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 7.3
66gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, comple... 38 7.3
67gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 38 7.3
68emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on ch... 38 7.3
69emb|Z49778.1|SSCRCRYR1 S.scrofa gene for skeletal muscle ryanodi... 38 7.3 
>gb|BC105982.1| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:6139199), complete cds
          Length = 2490

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1460 ctgctgactccctctcagtc 1441
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>gb|BC105981.1| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:6138716), complete cds
          Length = 2461

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1429 ctgctgactccctctcagtc 1410
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>gb|BC100823.2| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:40001106), complete cds
          Length = 2217

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1478 ctgctgactccctctcagtc 1459
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>gb|BC100822.2| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:40001104), complete cds
          Length = 2217

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1478 ctgctgactccctctcagtc 1459
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>gb|BC022993.1| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:4940867), complete cds
          Length = 2538

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1487 ctgctgactccctctcagtc 1468
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>gb|AY750848.1| Homo sapiens RTN3-A1 (RTN3) mRNA, complete cds
          Length = 4937

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 3903 ctgctgactccctctcagtc 3884
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>gb|AY427821.2| Homo sapiens reticulon 3-A (RTN3) mRNA, complete cds
          Length = 4880

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 3846 ctgctgactccctctcagtc 3827
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>ref|NM_006054.2| Homo sapiens reticulon 3 (RTN3), transcript variant 1, mRNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1548 ctgctgactccctctcagtc 1529
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>ref|NM_201428.1| Homo sapiens reticulon 3 (RTN3), transcript variant 2, mRNA
          Length = 4942

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 3879 ctgctgactccctctcagtc 3860
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>ref|NM_201429.1| Homo sapiens reticulon 3 (RTN3), transcript variant 3, mRNA
          Length = 2668

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1605 ctgctgactccctctcagtc 1586
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>ref|NM_201430.1| Homo sapiens reticulon 3 (RTN3), transcript variant 4, mRNA
          Length = 2542

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1489 ctgctgactccctctcagtc 1470
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>gb|BC010556.1| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:4154804), complete cds
          Length = 1703

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1461 ctgctgactccctctcagtc 1442
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>emb|CR858619.1| Pongo pygmaeus mRNA; cDNA DKFZp459J0533 (from clone DKFZp459J0533)
          Length = 2585

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1490 ctgctgactccctctcagtc 1471
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>emb|CR624616.1| full-length cDNA clone CS0DN005YN11 of Adult brain of Homo sapiens
            (human)
          Length = 1690

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1482 ctgctgactccctctcagtc 1463
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>dbj|AK127079.1| Homo sapiens cDNA FLJ45136 fis, clone BRAWH3038324, highly  similar
            to Reticulon protein 3
          Length = 4607

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 3574 ctgctgactccctctcagtc 3555
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>emb|CR619650.1| full-length cDNA clone CS0DF032YB09 of Fetal brain of Homo sapiens
            (human)
          Length = 1675

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1491 ctgctgactccctctcagtc 1472
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>dbj|AK122727.1| Homo sapiens cDNA FLJ16232 fis, clone FEBRA2027742, highly  similar
            to Homo sapiens reticulon gene family protein (RTN3) mRNA
          Length = 3034

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 2000 ctgctgactccctctcagtc 1981
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>dbj|AK094965.1| Homo sapiens cDNA FLJ37646 fis, clone BRHIP2000312, highly similar to
            Homo sapiens reticulon gene family protein (RTN3) mRNA
          Length = 3637

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 2602 ctgctgactccctctcagtc 2583
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>emb|CR614599.1| full-length cDNA clone CS0DA003YJ09 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1652

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1519 ctgctgactccctctcagtc 1500
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>emb|CR614083.1| full-length cDNA clone CS0DB007YA13 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1683

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1492 ctgctgactccctctcagtc 1473
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>emb|CR609823.1| full-length cDNA clone CS0DM001YF17 of Fetal liver of Homo sapiens
            (human)
          Length = 1701

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1480 ctgctgactccctctcagtc 1461
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>emb|CR609229.1| full-length cDNA clone CS0DI006YG09 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1692

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1492 ctgctgactccctctcagtc 1473
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>emb|CR607815.1| full-length cDNA clone CS0DI006YL08 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1667

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1484 ctgctgactccctctcagtc 1465
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>emb|CR606090.1| full-length cDNA clone CS0DH001YM07 of T cells (Jurkat cell line) of
            Homo sapiens (human)
          Length = 1668

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1501 ctgctgactccctctcagtc 1482
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>emb|CR602829.1| full-length cDNA clone CS0DJ003YJ18 of T cells (Jurkat cell line) Cot
            10-normalized of Homo sapiens (human)
          Length = 1549

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1357 ctgctgactccctctcagtc 1338
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>emb|CR601675.1| full-length cDNA clone CS0DI075YD06 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1644

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1480 ctgctgactccctctcagtc 1461
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>dbj|AK075412.1| Homo sapiens cDNA PSEC0103 fis, clone NT2RP2004755, highly similar to
            Reticulon protein 3
          Length = 2530

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1497 ctgctgactccctctcagtc 1478
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>emb|CR596154.1| full-length cDNA clone CS0DJ006YD19 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1263

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  ctgctgactccctctcagtc 108
           ||||||||||||||||||||
Sbjct: 260 ctgctgactccctctcagtc 241
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>emb|CR592349.1| full-length cDNA clone CS0DF010YO07 of Fetal brain of Homo sapiens
            (human)
          Length = 1608

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1480 ctgctgactccctctcagtc 1461
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>tpg|BK001685.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A-D8 (RTN3) mRNA, complete
            cds, alternatively spliced
          Length = 2530

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1499 ctgctgactccctctcagtc 1480
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>tpg|BK001684.1| TPA: TPA_inf: Homo sapiens RTN3-A2 (RTN3) mRNA, complete cds,
            alternatively spliced
          Length = 2646

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1615 ctgctgactccctctcagtc 1596
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>tpg|BK001683.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A3 (RTN3) mRNA, complete
            cds, alternatively spliced
          Length = 3011

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1980 ctgctgactccctctcagtc 1961
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>tpg|BK001682.1| TPA: TPA_inf: Homo sapiens truncated RTN3-A-D5 (RTN3) mRNA, complete
            cds, alternatively spliced
          Length = 2450

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1419 ctgctgactccctctcagtc 1400
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>tpg|BK001681.1| TPA: TPA_inf: Homo sapiens RTN3-A1 (RTN3) mRNA, complete cds;
            alternatively spliced
          Length = 2589

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1558 ctgctgactccctctcagtc 1539
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>ref|NM_164677.1| Drosophila melanogaster slowmo CG9131-RA, transcript variant A
           (slmo), mRNA
          Length = 1288

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 gcaaggtcgcgcgggggctg 129
           ||||||||||||||||||||
Sbjct: 909 gcaaggtcgcgcgggggctg 928
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>ref|NM_079966.2| Drosophila melanogaster slowmo CG9131-RB, transcript variant B
           (slmo), mRNA
          Length = 1169

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 gcaaggtcgcgcgggggctg 129
           ||||||||||||||||||||
Sbjct: 790 gcaaggtcgcgcgggggctg 809
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>ref|NG_005175.1| Homo sapiens reticulon protein 3 pseudogene (LOC152905) on chromosome
            4
          Length = 2778

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1634 ctgctgactccctctcagtc 1615
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>gb|AY051484.1| Drosophila melanogaster GH14384 full length cDNA
          Length = 1261

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 gcaaggtcgcgcgggggctg 129
           ||||||||||||||||||||
Sbjct: 862 gcaaggtcgcgcgggggctg 881
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>gb|AC092216.1|AC092216 Drosophila melanogaster, chromosome 2L, region 25F-26A, BAC clone
              BACR10M11, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    gcaaggtcgcgcgggggctg 129
              ||||||||||||||||||||
Sbjct: 103384 gcaaggtcgcgcgggggctg 103403
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>gb|AC079228.7| Homo sapiens BAC clone RP11-142A22 from 4, complete sequence
          Length = 160824

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctgctgactccctctcagtc 108
              ||||||||||||||||||||
Sbjct: 153042 ctgctgactccctctcagtc 153023
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>gb|BC011394.1| Homo sapiens reticulon 3, transcript variant 1, mRNA (cDNA clone
            IMAGE:3873400), complete cds
          Length = 2529

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1497 ctgctgactccctctcagtc 1478
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>gb|AF218125.1|AF218125 Drosophila melanogaster Kisir mRNA, complete cds
          Length = 1374

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  gcaaggtcgcgcgggggctg 129
            ||||||||||||||||||||
Sbjct: 1120 gcaaggtcgcgcgggggctg 1139
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>gb|AF059529.1|SEG_HSNSP5 Homo sapiens reticulon gene family protein (RTN3) gene, exon 7 and
           complete cds
          Length = 2051

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  ctgctgactccctctcagtc 108
           ||||||||||||||||||||
Sbjct: 843 ctgctgactccctctcagtc 824
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>gb|AF059524.1|AF059524 Homo sapiens reticulon gene family protein (RTN3) mRNA, complete cds
          Length = 2524

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1493 ctgctgactccctctcagtc 1474
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>gb|AF119297.1|AF119297 Homo sapiens neuroendocrine-specific protein-like protein 1 (NSPL1)
            mRNA, complete cds
          Length = 2559

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctgctgactccctctcagtc 108
            ||||||||||||||||||||
Sbjct: 1497 ctgctgactccctctcagtc 1478
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>gb|AE003612.2| Drosophila melanogaster chromosome 2L, section 21 of 83 of the complete
             sequence
          Length = 260673

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   gcaaggtcgcgcgggggctg 129
             ||||||||||||||||||||
Sbjct: 90695 gcaaggtcgcgcgggggctg 90676
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>dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-466C23, complete
             sequence
          Length = 166042

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgctgactccctctcagtc 108
             ||||||||||||||||||||
Sbjct: 37053 ctgctgactccctctcagtc 37034
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>gb|AC004758.1|AC004758 Drosophila melanogaster DNA sequence (P1s DS06106 (D123), DS05973
             (D122), and DS08584 (D118)), complete sequence
          Length = 174311

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   gcaaggtcgcgcgggggctg 129
             ||||||||||||||||||||
Sbjct: 43096 gcaaggtcgcgcgggggctg 43115
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>dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-7G15, complete
             sequence
          Length = 110892

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctgctgactccctctcagtc 108
             ||||||||||||||||||||
Sbjct: 44526 ctgctgactccctctcagtc 44507
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>dbj|AP000753.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H9, complete
              sequence
          Length = 184057

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctgctgactccctctcagtc 108
              ||||||||||||||||||||
Sbjct: 183630 ctgctgactccctctcagtc 183611
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 49      gatcagcggatcgccggtc 67
               |||||||||||||||||||
Sbjct: 3165691 gatcagcggatcgccggtc 3165709
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>ref|XM_366954.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
          (MG03030.4) partial mRNA
          Length = 768

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 5  gccgatcgcacaaggcaca 23
          |||||||||||||||||||
Sbjct: 31 gccgatcgcacaaggcaca 13
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     gcgatcagcggatcgccgg 65
              |||||||||||||||||||
Sbjct: 733108 gcgatcagcggatcgccgg 733126
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>gb|AC134332.2| Mus musculus BAC clone RP24-385N13 from chromosome 1, complete sequence
          Length = 124525

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 81    tgccactgctgctgactccctct 103
             ||||||||||| |||||||||||
Sbjct: 72263 tgccactgctgttgactccctct 72241
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>gb|AC159707.2| Mus musculus chromosome 1, clone RP24-176K12, complete sequence
          Length = 79081

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 81    tgccactgctgctgactccctct 103
             ||||||||||| |||||||||||
Sbjct: 76099 tgccactgctgttgactccctct 76121
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>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence
          Length = 226187

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 120    gcgggggctgatccagagc 138
              |||||||||||||||||||
Sbjct: 130490 gcgggggctgatccagagc 130472
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>gb|AC117234.4| Mus musculus BAC clone RP23-410J2 from chromosome 6, complete sequence
          Length = 193027

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 77    gcaatgccactgctgctga 95
             |||||||||||||||||||
Sbjct: 30627 gcaatgccactgctgctga 30609
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>gb|AC125071.3| Mus musculus BAC clone RP23-453O8 from chromosome 12, complete sequence
          Length = 168279

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 81     tgccactgctgctgactcc 99
              |||||||||||||||||||
Sbjct: 125883 tgccactgctgctgactcc 125865
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>gb|AC125224.3| Mus musculus BAC clone RP23-33N8 from 17, complete sequence
          Length = 195968

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    tgccactgctgctgactcc 99
             |||||||||||||||||||
Sbjct: 31406 tgccactgctgctgactcc 31424
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 47      gcgatcagcggatcgccgg 65
               |||||||||||||||||||
Sbjct: 1796636 gcgatcagcggatcgccgg 1796618
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>gb|AE008818.1| Salmonella typhimurium LT2, section 122 of 220 of the complete genome
          Length = 29466

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    gcgatcagcggatcgccggtcgc 69
             ||||||||||||||| |||||||
Sbjct: 18419 gcgatcagcggatcggcggtcgc 18441
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 47      gcgatcagcggatcgccgg 65
               |||||||||||||||||||
Sbjct: 2053404 gcgatcagcggatcgccgg 2053422
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     gcgatcagcggatcgccgg 65
              |||||||||||||||||||
Sbjct: 750038 gcgatcagcggatcgccgg 750020
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>gb|AC006473.4| Homo sapiens chromosome 17, clone RP11-203M16, complete sequence
          Length = 88121

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    ggcaatgccactgctgctg 94
             |||||||||||||||||||
Sbjct: 49090 ggcaatgccactgctgctg 49108
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 47      gcgatcagcggatcgccggtcgc 69
               ||||| |||||||||||||||||
Sbjct: 1611309 gcgatgagcggatcgccggtcgc 1611287
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>gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, complete sequence
          Length = 185587

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    atgccactgctgctgactc 98
             |||||||||||||||||||
Sbjct: 96184 atgccactgctgctgactc 96166
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 47      gcgatcagcggatcgccggtcgc 69
               ||||||||||||||| |||||||
Sbjct: 1336161 gcgatcagcggatcggcggtcgc 1336139
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>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete
             sequence
          Length = 216634

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    tgccactgctgctgactcc 99
             |||||||||||||||||||
Sbjct: 60439 tgccactgctgctgactcc 60421
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>emb|Z49778.1|SSCRCRYR1 S.scrofa gene for skeletal muscle ryanodine receptor
          Length = 28080

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 86    ctgctgctgactccctctc 104
             |||||||||||||||||||
Sbjct: 13086 ctgctgctgactccctctc 13068


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 765,217
Number of Sequences: 3902068
Number of extensions: 765217
Number of successful extensions: 51952
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51443
Number of HSP's gapped (non-prelim): 509
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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