| Clone Name | bast76b10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RM27_CRYNE (P46288) 60S ribosomal protein L27, mitochondrial pre... | 30 | 2.5 | 2 | ACON_CORGL (Q8NQ98) Aconitate hydratase (EC 4.2.1.3) | 29 | 5.5 | 3 | ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hy... | 29 | 5.5 | 4 | CR14_HORVU (P26154) Cold-regulated protein BLT14 | 29 | 7.2 |
|---|
>RM27_CRYNE (P46288) 60S ribosomal protein L27, mitochondrial precursor| Length = 183 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 Query: 120 FAGIPRLVALVQVRDAVAAFGGQEKRSREMAG 25 FAG L + +QVR A A GG+ K RE AG Sbjct: 20 FAGPSSLASQIQVRWASKAAGGKSKNGRESAG 51
>ACON_CORGL (Q8NQ98) Aconitate hydratase (EC 4.2.1.3)| Length = 939 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = -1 Query: 156 EGEASPA-VIEGSFAGIPRLVALVQVRDAVAAFGG 55 E + +PA V+ F G+P +V L +R+AVAA GG Sbjct: 75 EIQFTPARVLMQDFTGVPCVVDLATMREAVAALGG 109
>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 961 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = -1 Query: 156 EGEASPA-VIEGSFAGIPRLVALVQVRDAVAAFGGQEKRSREMA 28 E + +PA V+ F G+P +V L +R+A+A GG ++ +A Sbjct: 102 EIQYTPARVVMQDFTGVPCIVDLATMREAIADLGGNPEKVNPLA 145
>CR14_HORVU (P26154) Cold-regulated protein BLT14| Length = 88 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 91 GASEGRCRCVRWTREEIEGDGWVRVG*N 8 G S+ RCRC RW R ++G G G N Sbjct: 27 GCSDTRCRCQRW-RRRLQGFGLAAAGGN 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,965,606 Number of Sequences: 219361 Number of extensions: 725643 Number of successful extensions: 2436 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2436 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)