ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 212 bits (107), Expect = 6e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccgacgccgccgtgtactacgccaccacgcgcaccgttccgcag 218 |||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||| Sbjct: 71873 ggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcag 71932 Query: 219 cagtcgggcgccgagatctccctctctctcgccgtgctgcggcgccgcgcgccgatccgg 278 |||||| ||||||||||||| || || || |||||||| || |||||||||||| | ||| Sbjct: 71933 cagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcgg 71992 Query: 279 ctgctggtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggc 338 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 71993 ctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggc 72052 Query: 339 gtcaccgtcttcctggaggaggacccg 365 | |||||| ||||| |||||||||||| Sbjct: 72053 gccaccgtgttcctcgaggaggacccg 72079
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 212 bits (107), Expect = 6e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccgacgccgccgtgtactacgccaccacgcgcaccgttccgcag 218 |||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||| Sbjct: 6374 ggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcag 6433 Query: 219 cagtcgggcgccgagatctccctctctctcgccgtgctgcggcgccgcgcgccgatccgg 278 |||||| ||||||||||||| || || || |||||||| || |||||||||||| | ||| Sbjct: 6434 cagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcgg 6493 Query: 279 ctgctggtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggc 338 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 6494 ctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggc 6553 Query: 339 gtcaccgtcttcctggaggaggacccg 365 | |||||| ||||| |||||||||||| Sbjct: 6554 gccaccgtgttcctcgaggaggacccg 6580
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 212 bits (107), Expect = 6e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccgacgccgccgtgtactacgccaccacgcgcaccgttccgcag 218 |||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||| Sbjct: 16690759 ggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcag 16690818 Query: 219 cagtcgggcgccgagatctccctctctctcgccgtgctgcggcgccgcgcgccgatccgg 278 |||||| ||||||||||||| || || || |||||||| || |||||||||||| | ||| Sbjct: 16690819 cagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcgg 16690878 Query: 279 ctgctggtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggc 338 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 16690879 ctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggc 16690938 Query: 339 gtcaccgtcttcctggaggaggacccg 365 | |||||| ||||| |||||||||||| Sbjct: 16690939 gccaccgtgttcctcgaggaggacccg 16690965 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 264 cgcgcgccgatccggctgctggtgttcggcctc 296 ||||||||| ||||||||| |||||||||||| Sbjct: 16623392 cgcgcgccgtgccggctgctcgtgttcggcctc 16623424 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgcgctcgccgacgccgcc 185 ||||||||||||||||||||| Sbjct: 524964 gccgcgctcgccgacgccgcc 524984
>dbj|AK108872.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C10, full insert sequence Length = 1378 Score = 212 bits (107), Expect = 6e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccgacgccgccgtgtactacgccaccacgcgcaccgttccgcag 218 |||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||| Sbjct: 261 ggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcag 320 Query: 219 cagtcgggcgccgagatctccctctctctcgccgtgctgcggcgccgcgcgccgatccgg 278 |||||| ||||||||||||| || || || |||||||| || |||||||||||| | ||| Sbjct: 321 cagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcgg 380 Query: 279 ctgctggtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggc 338 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 381 ctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggc 440 Query: 339 gtcaccgtcttcctggaggaggacccg 365 | |||||| ||||| |||||||||||| Sbjct: 441 gccaccgtgttcctcgaggaggacccg 467
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 212 bits (107), Expect = 6e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccgacgccgccgtgtactacgccaccacgcgcaccgttccgcag 218 |||||||| || |||||||||||||||||| |||||||| |||| ||||| |||||| Sbjct: 16784582 ggcctcgcggccctcgccgacgccgccgtgaggtacgccacgacgccgaccgtgccgcag 16784641 Query: 219 cagtcgggcgccgagatctccctctctctcgccgtgctgcggcgccgcgcgccgatccgg 278 |||||| ||||||||||||| || || || |||||||| || |||||||||||| | ||| Sbjct: 16784642 cagtcgcgcgccgagatctcgctgtcgctggccgtgctccgccgccgcgcgccgctgcgg 16784701 Query: 279 ctgctggtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggc 338 ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 16784702 ctgctggtgttcggcctgggccacgactcgccgctgtggcacgcgctcaacccgggcggc 16784761 Query: 339 gtcaccgtcttcctggaggaggacccg 365 | |||||| ||||| |||||||||||| Sbjct: 16784762 gccaccgtgttcctcgaggaggacccg 16784788 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 264 cgcgcgccgatccggctgctggtgttcggcctc 296 ||||||||| ||||||||| |||||||||||| Sbjct: 16704142 cgcgcgccgtgccggctgctcgtgttcggcctc 16704174 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccgcgctcgccgacgccgcc 185 ||||||||||||||||||||| Sbjct: 524964 gccgcgctcgccgacgccgcc 524984
>ref|XM_474130.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 285 gtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggcgtcacc 344 ||||||||||||||| ||| || | |||||||| |||||||||| ||||||| |||| Sbjct: 349 gtgttcggcctcggcgccgagtccccgctctggctggcgctcaaccacggcggccgcacc 408 Query: 345 gtcttcctggaggag 359 |||||||| |||||| Sbjct: 409 gtcttcctcgaggag 423
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 285 gtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggcgtcacc 344 ||||||||||||||| ||| || | |||||||| |||||||||| ||||||| |||| Sbjct: 33152800 gtgttcggcctcggcgccgagtccccgctctggctggcgctcaaccacggcggccgcacc 33152859 Query: 345 gtcttcctggaggag 359 |||||||| |||||| Sbjct: 33152860 gtcttcctcgaggag 33152874 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 31646952 tcgccgcgctcgccgacgcc 31646933
>dbj|AK061488.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A09, full insert sequence Length = 1329 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 285 gtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggcgtcacc 344 ||||||||||||||| ||| || | |||||||| |||||||||| ||||||| |||| Sbjct: 535 gtgttcggcctcggcgccgagtccccgctctggctggcgctcaaccacggcggccgcacc 594 Query: 345 gtcttcctggaggag 359 |||||||| |||||| Sbjct: 595 gtcttcctcgaggag 609
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 285 gtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggcgtcacc 344 ||||||||||||||| ||| || | |||||||| |||||||||| ||||||| |||| Sbjct: 43224 gtgttcggcctcggcgccgagtccccgctctggctggcgctcaaccacggcggccgcacc 43283 Query: 345 gtcttcctggaggag 359 |||||||| |||||| Sbjct: 43284 gtcttcctcgaggag 43298
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 285 gtgttcggcctcggccacgactcgcggctctggcacgcgctcaaccccggcggcgtcacc 344 ||||||||||||||| ||| || | |||||||| |||||||||| ||||||| |||| Sbjct: 35450 gtgttcggcctcggcgccgagtccccgctctggctggcgctcaaccacggcggccgcacc 35509 Query: 345 gtcttcctggaggag 359 |||||||| |||||| Sbjct: 35510 gtcttcctcgaggag 35524
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 252 gtgctgcggcgccgcgcgccgatccggctgctggtgttcggcctcggccacgactcgcgg 311 ||||| ||||| ||||||||| | ||||||||||||||||||||||| ||| ||| | Sbjct: 3189483 gtgctccggcggcgcgcgccgtgcaggctgctggtgttcggcctcggcgccgagacgccg 3189424 Query: 312 ctctggcacgcgctcaaccccggcgg 337 || |||| |||||| |||| |||||| Sbjct: 3189423 ctgtggcgcgcgctgaaccacggcgg 3189398
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 252 gtgctgcggcgccgcgcgccgatccggctgctggtgttcggcctcggccacgactcgcgg 311 ||||| ||||| ||||||||| | ||||||||||||||||||||||| ||| ||| | Sbjct: 117637 gtgctccggcggcgcgcgccgtgcaggctgctggtgttcggcctcggcgccgagacgccg 117578 Query: 312 ctctggcacgcgctcaaccccggcgg 337 || |||| |||||| |||| |||||| Sbjct: 117577 ctgtggcgcgcgctgaaccacggcgg 117552
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 252 gtgctgcggcgccgcgcgccgatccggctgctggtgttcggcctcggccacgactcgcgg 311 ||||| ||||| ||||||||| | ||||||||||||||||||||||| ||| ||| | Sbjct: 61670 gtgctccggcggcgcgcgccgtgcaggctgctggtgttcggcctcggcgccgagacgccg 61611 Query: 312 ctctggcacgcgctcaaccccggcgg 337 || |||| |||||| |||| |||||| Sbjct: 61610 ctgtggcgcgcgctgaaccacggcgg 61585
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 315 tggcacgcgctcaaccccggcggcgtcaccgtcttcctggaggaggac 362 |||| ||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 5488521 tggcgcgcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 5488568
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Minus Query: 315 tggcacgcgctcaaccccggcggcgtcaccgtcttcctggaggaggac 362 |||| ||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 109656 tggcgcgcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 109609
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 315 tggcacgcgctcaaccccggcggcgtcaccgtcttcctggaggaggac 362 |||| ||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 5488510 tggcgcgcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 5488557
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 48.1 bits (24), Expect = 0.020 Identities = 42/48 (87%) Strand = Plus / Plus Query: 315 tggcacgcgctcaaccccggcggcgtcaccgtcttcctggaggaggac 362 |||| ||||||||||| ||||||| ||||||| |||| ||||||||| Sbjct: 41326 tggcgcgcgctcaaccacggcggccgcaccgtcctcctcgaggaggac 41373
>ref|XM_754073.1| Ustilago maydis 521 hypothetical protein (UM03019.1) partial mRNA Length = 612 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 cgctgccgttgctgccgctgctcccgt 111 |||||||| |||||||||||||||||| Sbjct: 366 cgctgccgctgctgccgctgctcccgt 340
>gb|AE012436.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 344 of 460 of the complete genome Length = 11689 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 tcgccgctgccgttgctgccgctgctc 107 ||||||||||||| ||||||||||||| Sbjct: 2052 tcgccgctgccgtggctgccgctgctc 2026
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 81 tcgccgctgccgttgctgccgctgctc 107 ||||||||||||| ||||||||||||| Sbjct: 1169039 tcgccgctgccgtggctgccgctgctc 1169065
>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence Length = 153520 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 cgccgcgctcgccgacgccgcc 185 |||||||||||||||||||||| Sbjct: 38955 cgccgcgctcgccgacgccgcc 38934
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ctcgccgcgctcgccgacgccg 183 |||||||||||||||||||||| Sbjct: 1639363 ctcgccgcgctcgccgacgccg 1639342 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 2555359 cggcgccgcgcgccgatccgg 2555339 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 523287 cggcgccgcgcgccgatccgg 523307
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 162 ctcgccgcgctcgccgacgccg 183 |||||||||||||||||||||| Sbjct: 2974671 ctcgccgcgctcgccgacgccg 2974650 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 1842553 cggcgccgcgcgccgatccgg 1842573 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 735404 cggcgccgcgcgccgatccgg 735384
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgccgccg 186 ||||||||||||||||| |||||||| Sbjct: 3915165 cctcgccgcgctcgccggcgccgccg 3915190 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gcggcgccgcgcgccgatccgg 278 |||||||||||||||||||||| Sbjct: 2028257 gcggcgccgcgcgccgatccgg 2028278 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggcctcgccgcgctcgccga 178 |||||||||||||||||||| Sbjct: 271105 ggcctcgccgcgctcgccga 271124 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cctcgccgcgctcgccgacg 180 |||||||||||||||||||| Sbjct: 74365 cctcgccgcgctcgccgacg 74346
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 cgcgctcgccgacgccgccgtg 188 |||||||||||||||||||||| Sbjct: 4794008 cgcgctcgccgacgccgccgtg 4793987 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 tcgccgcgctcgccgacgccgc 184 |||||||||||||||||||||| Sbjct: 895738 tcgccgcgctcgccgacgccgc 895759 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgc 184 ||||||||||||||||||||| Sbjct: 3667256 cgccgcgctcgccgacgccgc 3667276 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgcgctcgccgacgccgc 184 |||||||||||||||||||| Sbjct: 3321680 gccgcgctcgccgacgccgc 3321699 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ccgcgctcgccgacgccgcc 185 |||||||||||||||||||| Sbjct: 2525213 ccgcgctcgccgacgccgcc 2525232
>gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, complete sequence Length = 181572 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 gccgctgccgttgctgccgctgctc 107 |||||||||| |||||||||||||| Sbjct: 35485 gccgctgccgctgctgccgctgctc 35509
>ref|XM_476159.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cgccgctgccgttgctgccgc 102 ||||||||||||||||||||| Sbjct: 91 cgccgctgccgttgctgccgc 71
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 264 cgcgcgccgatccggctgctggtgttcggcctc 296 ||||||||| ||||||||| |||||||||||| Sbjct: 74046 cgcgcgccgtgccggctgctcgtgttcggcctc 74078
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 158 aggcctcgccgcgctcgccgacgcc 182 |||||||||||||||||||| |||| Sbjct: 92380 aggcctcgccgcgctcgccgccgcc 92356 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctcacctcgccgctgccgtt 94 |||||||||||||||||||| Sbjct: 142196 ctcacctcgccgctgccgtt 142177
>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15, complete sequence Length = 184316 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cgccgctgccgttgctgccgc 102 ||||||||||||||||||||| Sbjct: 61356 cgccgctgccgttgctgccgc 61336
>ref|XM_976196.1| PREDICTED: Mus musculus insulin receptor substrate 2 (Irs2), mRNA Length = 4288 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 gctgccgttgctgccgctgct 106 ||||||||||||||||||||| Sbjct: 102 gctgccgttgctgccgctgct 82
>ref|XM_382040.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01864.1) partial mRNA Length = 2364 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 cgccgctgccgttgctgccgctgct 106 ||||||||||| ||||||||||||| Sbjct: 2184 cgccgctgccgctgctgccgctgct 2160
>gb|AC107707.10| Mus musculus chromosome 1, clone RP24-268C13, complete sequence Length = 178000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 gccgctgccgttgctgccgctgctc 107 |||||||||| |||||||||||||| Sbjct: 165928 gccgctgccgctgctgccgctgctc 165952
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 cgtgctgcggcgccgcgcgccgatc 275 |||||||| |||||||||||||||| Sbjct: 1777343 cgtgctgcagcgccgcgcgccgatc 1777367
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgc 102 ||||||||||||||||||||| Sbjct: 3517313 cgccgctgccgttgctgccgc 3517333
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tcgccacctcgctgctggtcg 66 ||||||||||||||||||||| Sbjct: 258068 tcgccacctcgctgctggtcg 258048
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 tcgccacctcgctgctggtcg 66 ||||||||||||||||||||| Sbjct: 177075 tcgccacctcgctgctggtcg 177055
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tcgccacctcgctgctggtcg 66 ||||||||||||||||||||| Sbjct: 141429 tcgccacctcgctgctggtcg 141449
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 1957314 cggcgccgcgcgccgatccgg 1957294
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 941355 cggcgccgcgcgccgatccgg 941335 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 466298 cggcgccgcgcgccgatccgg 466278
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cgccgctgccgttgctgccgc 102 ||||||||||||||||||||| Sbjct: 6936433 cgccgctgccgttgctgccgc 6936413 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgctgccgttgctgccgctgctcc 108 |||||||||||||||||| ||||| Sbjct: 7736527 cgctgccgttgctgccgccgctcc 7736504
>gb|AC113484.14| Mus musculus chromosome 8, clone RP23-343H23, complete sequence Length = 176303 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 gctgccgttgctgccgctgct 106 ||||||||||||||||||||| Sbjct: 98466 gctgccgttgctgccgctgct 98486
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgcgctcgccgacgccgcc 185 ||||||||||||||||||||| Sbjct: 451775 gccgcgctcgccgacgccgcc 451755 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ggcggcgtcaccgtcttcct 352 |||||||||||||||||||| Sbjct: 849565 ggcggcgtcaccgtcttcct 849546
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgc 181 ||||||||||||||||||||| Sbjct: 74277 cctcgccgcgctcgccgacgc 74297
>gb|AC147513.16| Mus musculus chromosome 1, clone RP23-105K16, complete sequence Length = 209834 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 gccgctgccgttgctgccgctgctc 107 |||||||||| |||||||||||||| Sbjct: 75293 gccgctgccgctgctgccgctgctc 75317
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 2275353 cggcgccgcgcgccgatccgg 2275373 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 cggcgccgcgcgccgatccgg 278 ||||||||||||||||||||| Sbjct: 1256927 cggcgccgcgcgccgatccgg 1256907 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ctcgccgcgctcgccgacgc 181 |||||||||||||||||||| Sbjct: 1972013 ctcgccgcgctcgccgacgc 1971994
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gccgcgctcgccgacgccgcc 185 ||||||||||||||||||||| Sbjct: 45348 gccgcgctcgccgacgccgcc 45328
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 gccgtgctgcggcgccgcgcg 269 ||||||||||||||||||||| Sbjct: 41736 gccgtgctgcggcgccgcgcg 41756
>gb|AF402961.1| Oryza sativa chromosome 4 clone F8-40, genomic sequence Length = 37246 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 15192 tcgccgcgctcgccgacgcc 15211
>ref|NM_187949.1| Oryza sativa (japonica cultivar-group), Ozsa8369 predicted mRNA Length = 3879 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 ||||| |||||||||||||||||| Sbjct: 141 cgccgtgctcgccgacgccgccgt 164
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ctcgccgcgctcgccgacgc 181 |||||||||||||||||||| Sbjct: 115879 ctcgccgcgctcgccgacgc 115898
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 249 gccgtgctgcggcgccgcgcgccg 272 ||||||||||| |||||||||||| Sbjct: 1407241 gccgtgctgcgccgccgcgcgccg 1407264
>ref|XM_470289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgcgctcgccgacgccgccg 186 |||||||||||||||||||| Sbjct: 1107 cgcgctcgccgacgccgccg 1126
>ref|XM_478783.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgccgc 184 ||||||||||||||||| |||||| Sbjct: 21 cctcgccgcgctcgccgtcgccgc 44
>ref|XM_476873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1311 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgccgccg 186 ||||||||||||||| |||||||| Sbjct: 349 tcgccgcgctcgccggcgccgccg 326
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ctcgccgcgctcgccgacgc 181 |||||||||||||||||||| Sbjct: 3336509 ctcgccgcgctcgccgacgc 3336490
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgctgccgttgctgccgctgctcc 108 |||||||||||||||||| ||||| Sbjct: 14113 cgctgccgttgctgccgccgctcc 14090
>ref|XM_867191.1| PREDICTED: Bos taurus similar to transmembrane protein 28 (LOC615395), mRNA Length = 1096 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 |||||||||| ||||||||||||| Sbjct: 377 gccgctgccgctgctgccgctgct 354
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 |||||||| ||||||||||||||| Sbjct: 2422333 cgccgcgcccgccgacgccgccgt 2422356
>ref|XM_426179.1| PREDICTED: Gallus gallus similar to DNA polymerase zeta catalytic subunit (hREV3) (LOC428622), mRNA Length = 10719 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcgccacctcgctgctggtc 65 |||||||||||||||||||| Sbjct: 4171 tcgccacctcgctgctggtc 4190
>gb|BC058301.1| Danio rerio brain-derived neurotrophic factor, mRNA (cDNA clone MGC:65746 IMAGE:6797983), complete cds Length = 1904 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 418 cgccgctgccgctgctgccgctgc 441
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ctcgccgcgctcgccgacgc 181 |||||||||||||||||||| Sbjct: 650264 ctcgccgcgctcgccgacgc 650283
>gb|BC066468.1| Danio rerio brain-derived neurotrophic factor, mRNA (cDNA clone MGC:76835 IMAGE:6971282), complete cds Length = 1503 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 527 cgccgctgccgctgctgccgctgc 550
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cgccgcgcgccgatccggct 280 |||||||||||||||||||| Sbjct: 3778339 cgccgcgcgccgatccggct 3778358 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgcgcgccgatccggctgct 283 |||||||||||||||||||| Sbjct: 108627 cgcgcgccgatccggctgct 108646
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcgctcgccgacgccgccg 186 |||||||||||||||||||| Sbjct: 3684335 cgcgctcgccgacgccgccg 3684316
>gb|AY190952.1| Drosophila virilis clone DVIF01_45_G15 (D1418) genomic sequence Length = 39016 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 ||||||||||||||||| |||||| Sbjct: 25869 gccgctgccgttgctgctgctgct 25846
>ref|XM_535843.2| PREDICTED: Canis familiaris similar to leprecan-like 1, transcript variant 1 (LOC478674), mRNA Length = 2724 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 20 cgccgctgccgctgctgccgctgc 43
>ref|XM_754269.1| Ustilago maydis 521 hypothetical protein (UM03215.1) partial mRNA Length = 2400 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gccgctgccgttgctgccgctgct 106 |||||||||| ||||||||||||| Sbjct: 2068 gccgctgccgctgctgccgctgct 2091
>ref|XM_390664.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10488.1) partial mRNA Length = 252 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 cctcgccgctgccgttgctgccgctgct 106 ||||| |||||| ||||||||||||||| Sbjct: 184 cctcgtcgctgctgttgctgccgctgct 157
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 acgccaccacgcgcaccgttccgc 216 |||||||||||||||||| ||||| Sbjct: 1235084 acgccaccacgcgcaccgatccgc 1235107
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacg 180 |||||||||||||||||||| Sbjct: 712312 cctcgccgcgctcgccgacg 712331
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 |||||||| ||||||||||||||| Sbjct: 344938 cgccgcgcccgccgacgccgccgt 344961
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ctcgccgcgctcgccgacgc 181 |||||||||||||||||||| Sbjct: 458878 ctcgccgcgctcgccgacgc 458897
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 |||||||| ||||||||||||||| Sbjct: 199051 cgccgcgcccgccgacgccgccgt 199074
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgccgc 184 ||||||||||||||||| |||||| Sbjct: 138756 cctcgccgcgctcgccggcgccgc 138779
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 24068 tcgccgcgctcgccgacgcc 24087
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 160 gcctcgccgcgctcgccgacgccgccgt 187 |||||||||||||| ||| ||||||||| Sbjct: 225452 gcctcgccgcgctcaccgtcgccgccgt 225479
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 61769 tcgccgcgctcgccgacgcc 61750
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 795805 tcgccgcgctcgccgacgcc 795786
>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete sequence Length = 234105 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 58080 cgccgctgccgctgctgccgctgc 58103
>gb|AE005982.1| Caulobacter crescentus CB15 section 308 of 359 of the complete genome Length = 12818 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cgccgcgctcgccgacgccgccgt 187 ||||||| |||||||||||||||| Sbjct: 8875 cgccgcgatcgccgacgccgccgt 8852
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gccgctgccgttgctgccgc 102 |||||||||||||||||||| Sbjct: 661660 gccgctgccgttgctgccgc 661679
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgcgctcgccgacgccgccg 186 |||||||||||||||||||| Sbjct: 97042 cgcgctcgccgacgccgccg 97061
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gctgctggtcgccaccctcctcac 79 |||||| ||||||||||||||||| Sbjct: 4313707 gctgctcgtcgccaccctcctcac 4313730
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cctcgccgcgctcgccgacg 180 |||||||||||||||||||| Sbjct: 261967 cctcgccgcgctcgccgacg 261948
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 acgccaccacgcgcaccgttccgc 216 |||||||||||||||||| ||||| Sbjct: 1126260 acgccaccacgcgcaccgatccgc 1126283
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgccgc 184 ||||||||||||||||| |||||| Sbjct: 23042427 cctcgccgcgctcgccgtcgccgc 23042450 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tcgccgcgctcgccgacgccgccg 186 ||||||||||||||| |||||||| Sbjct: 4358274 tcgccgcgctcgccggcgccgccg 4358297
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gccgcctcgccactgccgctgcag 33 ||||||||||||| |||||||||| Sbjct: 12528301 gccgcctcgccaccgccgctgcag 12528278
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cgcgctcgccgacgccgccg 186 |||||||||||||||||||| Sbjct: 3684446 cgcgctcgccgacgccgccg 3684427
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 ||||| |||||||||||||||||| Sbjct: 8750293 cgccgtgctcgccgacgccgccgt 8750316
>gb|AF546152.1| Streptomyces sp. 100/Eco52 UnbL (unbL), UnbV (unbV), UnbU (unbU), PskE (pksE), and TebC (tebC) genes, complete cds Length = 10352 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 ctgctggtcgccaccctcctcacc 80 |||||||||||||| ||||||||| Sbjct: 9809 ctgctggtcgccacgctcctcacc 9832
>gb|AY186999.1| Drosophila virilis unc-5 (unc-5) gene, partial cds; and ap (ap), vlc (vlc), CG17337 (CG17337), and CG13533 (CG13533) genes, complete cds Length = 83253 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 ||||||||||||||||| |||||| Sbjct: 35799 gccgctgccgttgctgctgctgct 35776
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cgccgcgctcgccgacgccgccgt 187 ||||| |||||||||||||||||| Sbjct: 67750 cgccgtgctcgccgacgccgccgt 67773
>emb|AJ315899.1|OSA315899 Oryza sativa DNA, clone F8-43 (C3) Length = 17213 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgcc 182 |||||||||||||||||||| Sbjct: 13484 tcgccgcgctcgccgacgcc 13465
>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01 Length = 142638 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gccgcctcgccactgccgctgcag 33 ||||||||||||| |||||||||| Sbjct: 102035 gccgcctcgccaccgccgctgcag 102012
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gccgcctcgccactgccgctgcag 33 ||||||||||||| |||||||||| Sbjct: 10614 gccgcctcgccaccgccgctgcag 10591
>emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chromosome X, complete sequence Length = 112893 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 63983 cgccgctgccgctgctgccgctgc 64006
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacgccgc 184 ||||||||||||||||| |||||| Sbjct: 117641 cctcgccgcgctcgccgtcgccgc 117664
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tcgccgcgctcgccgacgccgccg 186 ||||||||||||||| |||||||| Sbjct: 179328 tcgccgcgctcgccggcgccgccg 179351
>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete sequence Length = 212717 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgctgccgttgctgccgctgctcc 108 ||||||||||||||||| |||||| Sbjct: 188199 cgctgccgttgctgccgttgctcc 188222
>emb|AL935207.6| Zebrafish DNA sequence from clone CH211-251J8, complete sequence Length = 146351 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 12407 cgccgctgccgctgctgccgctgc 12430
>dbj|AK110356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-A01, full insert sequence Length = 2091 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 cacctcgccgctgccgttgctgccgctg 104 ||||||||||| ||||||||||| |||| Sbjct: 2034 cacctcgccgccgccgttgctgctgctg 2061
>ref|NM_207849.1| Eremothecium gossypii AAL046Cp (AAL046C), mRNA Length = 819 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cctcgccgcgctcgccgacg 180 |||||||||||||||||||| Sbjct: 192 cctcgccgcgctcgccgacg 211
>gb|BC066399.1| Danio rerio brain-derived neurotrophic factor, mRNA (cDNA clone MGC:76834 IMAGE:6968678), complete cds Length = 1461 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 406 cgccgctgccgctgctgccgctgc 429
>gb|U42489.1|DRU42489 Danio rerio brain-derived neurotrophic factor mRNA, complete cds Length = 1180 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 423 cgccgctgccgctgctgccgctgc 446
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 cgtcgccacctcgctgctggtcgccacc 71 ||||| |||||||||||||| ||||||| Sbjct: 2931359 cgtcggcacctcgctgctggccgccacc 2931386 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cgccgcgctcgccgacgccg 183 |||||||||||||||||||| Sbjct: 1584867 cgccgcgctcgccgacgccg 1584848
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 |||||||||| ||||||||||||| Sbjct: 10967 gccgctgccgctgctgccgctgct 10944
>gb|AC170594.2| Mus musculus BAC clone RP24-425N5 from chromosome 17, complete sequence Length = 161769 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 |||||||||| ||||||||||||| Sbjct: 93667 gccgctgccgctgctgccgctgct 93644 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 gccgctgccgttgctgccgctgct 106 |||||||||| ||||||||||||| Sbjct: 47279 gccgctgccgctgctgccgctgct 47256
>ref|NM_131595.2| Danio rerio brain-derived neurotrophic factor (bdnf), mRNA Length = 1904 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 cgccgctgccgttgctgccgctgc 105 ||||||||||| |||||||||||| Sbjct: 418 cgccgctgccgctgctgccgctgc 441
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgctgccgttgctgccgctgctcc 108 |||||||||||||||||| ||||| Sbjct: 47035 cgctgccgttgctgccgccgctcc 47012
>dbj|AB053475.1| Oryza sativa gene for RISBZ1, complete cds Length = 4442 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgccgccg 186 ||||||||||||||| |||||||| Sbjct: 551 tcgccgcgctcgccggcgccgccg 528
>dbj|AB053472.1| Oryza sativa mRNA for RISBZ1, complete cds Length = 1768 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tcgccgcgctcgccgacgccgccg 186 ||||||||||||||| |||||||| Sbjct: 551 tcgccgcgctcgccggcgccgccg 528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,805,696 Number of Sequences: 3902068 Number of extensions: 2805696 Number of successful extensions: 125292 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116620 Number of HSP's gapped (non-prelim): 8672 length of query: 371 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 349 effective length of database: 17,147,199,772 effective search space: 5984372720428 effective search space used: 5984372720428 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
