ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76b06 |
|---|---|
| Clone Library Name | barley_pub |
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 195 bits (496), Expect = 4e-50 Identities = 100/145 (68%), Positives = 100/145 (68%) Frame = +3 Query: 3 LAVRTQXXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWH 182 LAVRTQ KKTLRQGVVVIT ETGKWH Sbjct: 42 LAVRTQVATAPSSVTTSPGSATAKPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWH 101 Query: 183 VVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 362 VVMACRDFL GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA Sbjct: 102 VVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161 Query: 363 IYRPTARTPTFTADGHEMSVGVNHL 437 IYRPTARTPTFTADGHEMSVGVNHL Sbjct: 162 IYRPTARTPTFTADGHEMSVGVNHL 186
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 195 bits (495), Expect = 5e-50 Identities = 100/145 (68%), Positives = 100/145 (68%) Frame = +3 Query: 3 LAVRTQXXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWH 182 LAVRTQ KKTLRQGVVVIT ETGKWH Sbjct: 42 LAVRTQVATAPSPVTTSPGSTASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWH 101 Query: 183 VVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 362 VVMACRDFL GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA Sbjct: 102 VVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161 Query: 363 IYRPTARTPTFTADGHEMSVGVNHL 437 IYRPTARTPTFTADGHEMSVGVNHL Sbjct: 162 IYRPTARTPTFTADGHEMSVGVNHL 186
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 167 bits (424), Expect = 8e-42 Identities = 84/111 (75%), Positives = 85/111 (76%) Frame = +3 Query: 105 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLAS 284 VVVIT ETGKWHVVMACRDFL GMADGSYTVMHLDLAS Sbjct: 1 VVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLAS 60 Query: 285 LDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 LDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTAR PTFTA+G EMSVGVNHL Sbjct: 61 LDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARKPTFTAEGVEMSVGVNHL 111
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 161 bits (408), Expect = 6e-40 Identities = 78/118 (66%), Positives = 86/118 (72%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKTLR+G VV+T ETGKWHV+MACRDFL GM SYTV Sbjct: 87 KKTLRKGNVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAQSAGMPKDSYTV 146 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASLDSVRQFVD FRRAEMPLDVLVCNAA+Y+PTA PTFTA+G E+SVG+NHL Sbjct: 147 MHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHL 204
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 154 bits (389), Expect = 9e-38 Identities = 73/118 (61%), Positives = 84/118 (71%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKTLR+G V+IT ETGKWHV+MACRDFL GM +YT+ Sbjct: 80 KKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTI 139 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASLDSVRQFV+ FRR+E PLDVLVCNAA+Y PTA+ PT+TADG E+SVG NHL Sbjct: 140 MHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHL 197
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 150 bits (379), Expect = 1e-36 Identities = 73/118 (61%), Positives = 83/118 (70%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKTLR+G VVIT ETGKWHV+MACRDFL G+ +YTV Sbjct: 81 KKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGITKENYTV 140 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASLDSVRQFVD FR++ PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHL Sbjct: 141 MHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHL 198
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 150 bits (378), Expect = 2e-36 Identities = 72/118 (61%), Positives = 85/118 (72%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKTLR+G VVIT E+GKWHV+MACRD+L G+A +YT+ Sbjct: 81 KKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTI 140 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASLDSVRQFVD FRR+EMPLDVL+ NAA+Y PTA+ P+FTADG E+SVG NHL Sbjct: 141 MHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHL 198
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 147 bits (372), Expect = 9e-36 Identities = 72/118 (61%), Positives = 82/118 (69%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKTLR+G VV+T ETGKW+V+MACRDFL GM SYTV Sbjct: 83 KKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTV 142 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASLDSVRQFVD FRR E PLDVLVCNAA+Y PTA+ PT++A+G E+SV NHL Sbjct: 143 MHLDLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHL 200
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 147 bits (370), Expect = 1e-35 Identities = 68/118 (57%), Positives = 83/118 (70%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKT+R G +IT E+GKWHV+MACRD+L GM GSYT+ Sbjct: 77 KKTVRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKTARAARAAGMPKGSYTI 136 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 +HLDLASLDSVRQFV R+ +MP+DV+VCNAA+Y+PTA+ P+FTADG EMSVGVNHL Sbjct: 137 VHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHL 194
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 144 bits (363), Expect = 9e-35 Identities = 68/118 (57%), Positives = 82/118 (69%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKT R+G VIT +TGKWHV+MACR+FL GM+ YTV Sbjct: 84 KKTERKGTAVITGASSGLGLATAKALADTGKWHVIMACRNFLKAEKAARSVGMSKEDYTV 143 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 MHLDLASL+SV+QFV+ FRR E PLDVLVCNAA+Y+PTA+ P+FTA+G E+SVG NHL Sbjct: 144 MHLDLASLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHL 201
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 126 bits (317), Expect = 2e-29 Identities = 60/118 (50%), Positives = 73/118 (61%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 263 KKT + +IT +TG+WHV+MACRDFL G+ SYTV Sbjct: 140 KKTATKSTCIITGASSGLGLATAKALADTGEWHVIMACRDFLKAERAARSVGIPKDSYTV 199 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 +H DLAS DSVR FVD FRR E LDVLVCNAA+Y PT + P F+A+G E+SVG NH+ Sbjct: 200 IHCDLASFDSVRAFVDNFRRTERQLDVLVCNAAVYFPTDKEPKFSAEGFELSVGTNHM 257
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 123 bits (308), Expect = 2e-28 Identities = 59/116 (50%), Positives = 73/116 (62%) Frame = +3 Query: 90 TLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMH 269 T ++ +IT TG+WHVVMACRDFL GM GSY+++H Sbjct: 82 TQQKQTAIITGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKVGMPAGSYSILH 141 Query: 270 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 LDL+SL+SVRQFV F+ + LD LVCNAA+Y PTA+ P FTADG E+SVG NHL Sbjct: 142 LDLSSLESVRQFVQNFKASGRRLDALVCNAAVYLPTAKEPRFTADGFELSVGTNHL 197
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 95.1 bits (235), Expect = 7e-20 Identities = 48/109 (44%), Positives = 62/109 (56%) Frame = +3 Query: 108 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 287 VVIT + G WHVVMACR+ GM+ SYT+MH+DL SL Sbjct: 9 VVITGASSGVGLYAAKALVKRG-WHVVMACRNLEKADSAAKSLGMSPDSYTLMHIDLGSL 67 Query: 288 DSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNH 434 DSVR+FV FR + LD LVCNAA++ P + P + +G+E+SV NH Sbjct: 68 DSVRKFVTQFRESGKSLDALVCNAAVHMPLLKEPMRSPEGYELSVATNH 116
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 87.0 bits (214), Expect = 2e-17 Identities = 46/110 (41%), Positives = 58/110 (52%) Frame = +3 Query: 108 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 287 V+IT + G WHV+MACR+ G SYT++ LDL L Sbjct: 9 VIITGASSGVGLYGAKALIDKG-WHVIMACRNLDKTQKVADELGFPKDSYTIIKLDLGYL 67 Query: 288 DSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 DSVR+FV FR PL LVCNAA+Y P P ++AD +E+SV NHL Sbjct: 68 DSVRRFVAQFRELGRPLKALVCNAAVYFPLLDEPLWSADDYELSVATNHL 117
>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 412 Score = 55.8 bits (133), Expect = 4e-08 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 5/91 (5%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXXGMADGSYT-----VMHLDLASLDSVRQFVDAFRRAEMPLDV 344 HV++ACR+ + G ++ V+ LDLASL SVRQF + F+ ++PL V Sbjct: 147 HVILACRN---QSRASKAASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHV 203 Query: 345 LVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 LVCNAA+ R T DG E + + HL Sbjct: 204 LVCNAAVCSQPWR---LTEDGFESTFQICHL 231
>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/58 (51%), Positives = 37/58 (63%) Frame = +3 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 M LDLASL SV+ F +AF+ MPL +LVCNAAI+ + T DG E + VNHL Sbjct: 180 MTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIF---GSSWCLTEDGLESTFQVNHL 234
>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile| site FRA16D oxidoreductase) Length = 414 Score = 53.1 bits (126), Expect = 3e-07 Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 353 HV++ACR+ M LDLA L SV+ F +AF+ +PL VLVC Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209 Query: 354 NAAIYRPTARTPTFTADGHEMSVGVNHL 437 NAA + A + T DG E + VNHL Sbjct: 210 NAATF---ALPWSLTKDGLETTFQVNHL 234
>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 51.6 bits (122), Expect = 8e-07 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 353 HV++ACR+ + LDLA L SV+ F +AF+ +PL VLVC Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209 Query: 354 NAAIYRPTARTPTFTADGHEMSVGVNHL 437 NAA + A + T DG E + VNHL Sbjct: 210 NAATF---ALPWSLTKDGLETTFQVNHL 234
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 51.2 bits (121), Expect = 1e-06 Identities = 31/64 (48%), Positives = 35/64 (54%) Frame = +3 Query: 246 DGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVG 425 DG V LDLASL SVR F + E LDVL+ NA ++ T T DG EM G Sbjct: 104 DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPY---TKTEDGFEMQFG 160 Query: 426 VNHL 437 VNHL Sbjct: 161 VNHL 164
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 50.1 bits (118), Expect = 2e-06 Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 2/120 (1%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 257 K T+ V++T G ++++ACRD + Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELARRGG-NIILACRDMEKCEAAAKDIRGETLNHHV 91 Query: 258 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 HLDLASL S+R+F E +D+L+ NA + R T T DG EM GVNHL Sbjct: 92 NARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWT---TEDGFEMQFGVNHL 148
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 48.1 bits (113), Expect = 9e-06 Identities = 31/64 (48%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Frame = +3 Query: 249 GSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVG 425 G V LDLASL SVR F + E LDVL+ NA I++ P + T DG EM G Sbjct: 107 GELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMK----TEDGFEMQFG 162 Query: 426 VNHL 437 VNHL Sbjct: 163 VNHL 166
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 47.0 bits (110), Expect = 2e-05 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 353 HV++ACR+ M LDLA L SV+ F +AF+ + L VLVC Sbjct: 150 HVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVC 209 Query: 354 NAAIYRPTARTPTFTADGHEMSVGVNHL 437 NA + A T DG E + VNHL Sbjct: 210 NAGTF---ALPWGLTKDGLETTFQVNHL 234
>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) Length = 318 Score = 47.0 bits (110), Expect = 2e-05 Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Frame = +3 Query: 105 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVM--HLDL 278 VVV+T + G V +ACRD G+ V+ LDL Sbjct: 43 VVVVTGANTGIGKETAKELAQRGA-RVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDL 101 Query: 279 ASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHL 437 + S+R F F E L VL+ NA + P ++T ADG EM +GVNHL Sbjct: 102 SDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKT----ADGFEMHIGVNHL 151
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 46.6 bits (109), Expect = 3e-05 Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 2/120 (1%) Frame = +3 Query: 84 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 257 K T+ V++T + G +V++ACRD + Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELAKRGG-NVILACRDMEKCEVAAKDIRGETLNPRV 91 Query: 258 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 LDLASL S+R+F + E +D+LV NAA+ R T T DG EM GVN+L Sbjct: 92 RAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWT---TEDGFEMQFGVNYL 148
>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X| precursor (EC 1.1.-.-) (DHRSXY) Length = 330 Score = 45.4 bits (106), Expect = 6e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = +3 Query: 264 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 ++ DLAS+ S+RQFV F+ ++PL VL+ NA + R T DG E G+N+L Sbjct: 99 LYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRK---TRDGFEEHFGLNYL 153
>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis| retinol dehydrogenase) Length = 316 Score = 45.4 bits (106), Expect = 6e-05 Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Frame = +3 Query: 105 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGM--ADGSYTVMHLDL 278 VVVIT G V +ACRD L + + V LDL Sbjct: 41 VVVITGANTGIGKETARELASRGA-RVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDL 99 Query: 279 ASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHL 437 + S+R F + F E L +L+ NA + P ++ TADG E +GVNHL Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSK----TADGFETHLGVNHL 149
>RDH11_MOUSE (Q9QYF1) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (Short-chain aldehyde dehydrogenase) (SCALD) (Cell line M Length = 316 Score = 43.5 bits (101), Expect = 2e-04 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Frame = +3 Query: 183 VVMACRDFLXXXXXXXXXGMADGSYTVM--HLDLASLDSVRQFVDAFRRAEMPLDVLVCN 356 V +ACRD G+ V LDLA S+R F F E L +L+ N Sbjct: 65 VYLACRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINN 124 Query: 357 AAIYR-PTARTPTFTADGHEMSVGVNHL 437 A + P ++T ADG EM +GVNHL Sbjct: 125 AGVMMCPYSKT----ADGFEMHIGVNHL 148
>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)| Length = 316 Score = 42.7 bits (99), Expect = 4e-04 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 3/114 (2%) Frame = +3 Query: 105 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 278 VVVIT G V +ACRD L + V LDL Sbjct: 41 VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 99 Query: 279 ASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHL 437 + S+R F + F E L +L+ NA + P ++ T DG E GVNHL Sbjct: 100 SDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSK----TTDGFETHFGVNHL 149
>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate| specificity short chain dehydrogenase/reductase 2) Length = 316 Score = 42.7 bits (99), Expect = 4e-04 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 3/114 (2%) Frame = +3 Query: 105 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 278 VVVIT G V +ACRD L + V LDL Sbjct: 41 VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIQADTKNSQVLVRKLDL 99 Query: 279 ASLDSVRQFVDAFRRAEMPLDVLVCNAAIYR-PTARTPTFTADGHEMSVGVNHL 437 + S+R F + F E L +L+ NA + P ++ TADG E + VNHL Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSK----TADGFETHLAVNHL 149
>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X| homolog precursor (EC 1.1.-.-) (SCAD family protein) (DHRSXY) (Fragment) Length = 280 Score = 41.2 bits (95), Expect = 0.001 Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +3 Query: 270 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI-YRPTARTPTFTADGHEMSVGVNHL 437 LDLASL SVR F F+ +PL +LV NAA+ P A T DG E +GVN L Sbjct: 101 LDLASLASVRGFARDFQALGLPLHLLVNNAAVMLEPRAE----TEDGFERHLGVNFL 153
>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 409 Score = 38.9 bits (89), Expect = 0.006 Identities = 22/56 (39%), Positives = 35/56 (62%) Frame = +3 Query: 270 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHL 437 LDL+SL SV++FV+ +++ +D L+ NA ++ A T T DG E + V+HL Sbjct: 181 LDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVF---ALPYTRTVDGLETTFQVSHL 233
>ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 917 Score = 30.8 bits (68), Expect = 1.5 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 103 PCRSVFLPLGDDAVEPGLVVTGEGAVATCVLTAS 2 P V+L LGD + P + + G+ VAT TAS Sbjct: 258 PEAGVYLSLGDQRLNPNVTLDGDSLVATATATAS 291
>DHCA_PIG (Q28960) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) (20-beta-hydroxysteroid dehydrogenase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydroge Length = 288 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI 365 LD+ L S+R D R+ LDVLV NAAI Sbjct: 61 LDIIDLQSIRALCDFLRKEYGGLDVLVNNAAI 92
>YXBG_BACSU (P46331) Hypothetical oxidoreductase yxbG (EC 1.-.-.-)| Length = 273 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = +3 Query: 249 GSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGV 428 G HLD++ +SV+ F D + A +D+L NA + + + + D + + V Sbjct: 55 GQAESFHLDVSDENSVKAFADQIKDACGTIDILFNNAGVDQEGGKVHEYPVDLFDRIIAV 114 Query: 429 N 431 + Sbjct: 115 D 115
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 91 VFLPLGDDAVEPGLVVTGEGAVATCVLTAS 2 V+L LGD + P + + G+ VAT TAS Sbjct: 262 VYLALGDQNLSPDVTLEGDAFVATATATAS 291
>DHCA_RABIT (P47844) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 270 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAAI 365 LD+ L S+R D RRA L+VLV NA I Sbjct: 61 LDITDLQSIRALRDFLRRAYGGLNVLVNNAVI 92
>SYR_BORPE (Q7W0K0) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 560 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDV 344 ++V RDF +DG DL SLD +R F A+ R E LD+ Sbjct: 203 YIVEIARDFAARKSVQA----SDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDL 253
>SYR_BORPA (Q7W2Q2) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 561 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDV 344 ++V RDF +DG DL SLD +R F A+ R E LD+ Sbjct: 203 YIVEIARDFAARKSVQA----SDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDL 253
>SYR_BORBR (Q7WDQ0) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 561 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +3 Query: 180 HVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDV 344 ++V RDF +DG DL SLD +R F A+ R E LD+ Sbjct: 203 YIVEIARDFAARKSVQA----SDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDL 253
>TAT_HV1EL (P04611) TAT protein (Transactivating regulatory protein)| Length = 99 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -1 Query: 410 VPVGGEGRRARRGPVDGGVAHQ 345 + G + RR RRGP GG AHQ Sbjct: 45 ISYGRKKRRQRRGPPQGGQAHQ 66
>CYLC1_HUMAN (P35663) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)| Length = 651 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = +1 Query: 322 APRCRWMCWC-ATPPSTGPRRARRPSPP 402 +P+ R +CWC PP PR A P P Sbjct: 618 SPKVRRLCWCKMPPPPPKPRYAPLPEAP 645 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,278,493 Number of Sequences: 219361 Number of extensions: 360753 Number of successful extensions: 1734 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 1630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1729 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
